RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 DNAH2Q9P225 4427 aa9.64□□□□□ -0.87
CTSA-219ENST00000607841 VCYO14598 125 aa9.64□□□□□ -0.87
CTSA-219ENST00000607841 AMTP48728 403 aa9.64□□□□□ -0.87
CTSA-219ENST00000607841 SUMO2P61956 95 aaKnown RBP9.64□□□□□ -0.87
CTSA-219ENST00000607841 LAGE3Q14657 143 aa9.64□□□□□ -0.87
CTSA-219ENST00000607841 SLC7A5P1Q8MH63 180 aa9.64□□□□□ -0.87
CTSA-219ENST00000607841 ORMDL3Q8N138 153 aa9.64□□□□□ -0.87
CTSA-219ENST00000607841 NRACQ8N912 160 aa9.64□□□□□ -0.87
CTSA-219ENST00000607841 C20orf78Q9BR46 151 aa9.64□□□□□ -0.87
CTSA-219ENST00000607841 KRTAP17-1Q9BYP8 105 aa9.64□□□□□ -0.87
CTSA-219ENST00000607841 TRBV24-1A0A075B6N3 115 aa9.63□□□□□ -0.87
CTSA-219ENST00000607841 TRBV27A0A0K0K1C4 114 aa9.63□□□□□ -0.87
CTSA-219ENST00000607841 PRSS29PA6NIE9 313 aa9.63□□□□□ -0.87
CTSA-219ENST00000607841 D6R8Y8 96 aa9.63□□□□□ -0.87
CTSA-219ENST00000607841 PHOX2AO14813 284 aa9.63□□□□□ -0.87
CTSA-219ENST00000607841 UBE2L6O14933 153 aa9.63□□□□□ -0.87
CTSA-219ENST00000607841 APCSP02743 223 aa9.63□□□□□ -0.87
CTSA-219ENST00000607841 POLR2KP53803 58 aaKnown RBP9.63□□□□□ -0.87
CTSA-219ENST00000607841 TRAV8-3A0A0A6YYJ7 113 aa9.62□□□□□ -0.87
CTSA-219ENST00000607841 TNFRSF6BO95407 300 aa9.62□□□□□ -0.87
CTSA-219ENST00000607841 GAGE6Q13070 117 aa9.62□□□□□ -0.87
CTSA-219ENST00000607841 COX19Q49B96 90 aa9.62□□□□□ -0.87
CTSA-219ENST00000607841 TMEM136Q6ZRR5 245 aa9.62□□□□□ -0.87
CTSA-219ENST00000607841 KIR2DL4Q99706 377 aa9.62□□□□□ -0.87
CTSA-219ENST00000607841 MPV17L2Q567V2 206 aa9.61□□□□□ -0.87
CTSA-219ENST00000607841 ATRAIDQ6UW56 229 aa9.61□□□□□ -0.87
CTSA-219ENST00000607841 Q8N3U1 123 aa9.61□□□□□ -0.87
CTSA-219ENST00000607841 DEFB104AQ8WTQ1 72 aa9.61□□□□□ -0.87
CTSA-219ENST00000607841 KLK12Q9UKR0 248 aa9.61□□□□□ -0.87
CTSA-219ENST00000607841 LAMTOR2Q9Y2Q5 125 aa9.61□□□□□ -0.87
CTSA-219ENST00000607841 FRAS1Q86XX4 4008 aa9.61□□□□□ -0.87
CTSA-219ENST00000607841 H7C423 109 aa9.6□□□□□ -0.87
CTSA-219ENST00000607841 TCAPO15273 167 aa9.6□□□□□ -0.87
CTSA-219ENST00000607841 FCER1GP30273 86 aa9.6□□□□□ -0.87
CTSA-219ENST00000607841 RPL32P62910 135 aaKnown RBP9.6□□□□□ -0.87
CTSA-219ENST00000607841 PRELID3AQ96N28 172 aa9.6□□□□□ -0.87
CTSA-219ENST00000607841 GNB1LQ9BYB4 327 aa9.6□□□□□ -0.87
CTSA-219ENST00000607841 A0A1B0GUV1 79 aa9.59□□□□□ -0.87
CTSA-219ENST00000607841 TSHBP01222 138 aa9.59□□□□□ -0.87
CTSA-219ENST00000607841 HLA-DQA1P01909 254 aa9.59□□□□□ -0.87
CTSA-219ENST00000607841 ANGP03950 147 aaKnown RBP9.59□□□□□ -0.87
CTSA-219ENST00000607841 RBX1P62877 108 aa9.59□□□□□ -0.87
CTSA-219ENST00000607841 Q0VG73 95 aa9.59□□□□□ -0.87
CTSA-219ENST00000607841 Q8N976 141 aa9.59□□□□□ -0.87
CTSA-219ENST00000607841 RMI2Q96E14 147 aa9.59□□□□□ -0.87
CTSA-219ENST00000607841 TM2D2Q9BX73 214 aa9.59□□□□□ -0.87
CTSA-219ENST00000607841 Q9HAA7 133 aa9.59□□□□□ -0.87
CTSA-219ENST00000607841 PSCAO43653 123 aa9.58□□□□□ -0.88
CTSA-219ENST00000607841 NPYP01303 97 aa9.58□□□□□ -0.88
CTSA-219ENST00000607841 CRPP02741 224 aa9.58□□□□□ -0.88
CTSA-219ENST00000607841 MT-ND6P03923 174 aa9.58□□□□□ -0.88
CTSA-219ENST00000607841 AMMECR1LQ6DCA0 310 aa9.58□□□□□ -0.88
CTSA-219ENST00000607841 Q6ZRN7 208 aaPredicted RBP9.58□□□□□ -0.88
CTSA-219ENST00000607841 UBE2WQ96B02 151 aa9.58□□□□□ -0.88
CTSA-219ENST00000607841 COX11Q9Y6N1 276 aa9.58□□□□□ -0.88
CTSA-219ENST00000607841 ESDP10768 282 aa9.57□□□□□ -0.88
CTSA-219ENST00000607841 TNP2Q05952 138 aa9.57□□□□□ -0.88
CTSA-219ENST00000607841 SMIM2Q9BVW6 85 aa9.57□□□□□ -0.88
CTSA-219ENST00000607841 MAP1LC3AQ9H492 121 aa9.57□□□□□ -0.88
CTSA-219ENST00000607841 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.56□□□□□ -0.88
CTSA-219ENST00000607841 IGKV2-29A2NJV5 120 aaPredicted RBP9.56□□□□□ -0.88
CTSA-219ENST00000607841 SMAGPQ0VAQ4 97 aa9.56□□□□□ -0.88
CTSA-219ENST00000607841 TMEM18Q96B42 140 aa9.56□□□□□ -0.88
CTSA-219ENST00000607841 DNAH17Q9UFH2 4485 aa9.56□□□□□ -0.88
CTSA-219ENST00000607841 PRSS47A8MTI9 375 aa9.55□□□□□ -0.88
CTSA-219ENST00000607841 EREGO14944 169 aa9.55□□□□□ -0.88
CTSA-219ENST00000607841 FGF6P10767 208 aa9.55□□□□□ -0.88
CTSA-219ENST00000607841 ZNF25P17030 456 aaPredicted RBP9.55□□□□□ -0.88
CTSA-219ENST00000607841 RAB5AP20339 215 aa9.55□□□□□ -0.88
CTSA-219ENST00000607841 MIAQ16674 131 aa9.55□□□□□ -0.88
CTSA-219ENST00000607841 RNASEKQ6P5S7 137 aaKnown RBP9.55□□□□□ -0.88
CTSA-219ENST00000607841 LINC00269Q8N2A0 174 aa9.55□□□□□ -0.88
CTSA-219ENST00000607841 TMEM101Q96IK0 257 aa9.55□□□□□ -0.88
CTSA-219ENST00000607841 IGKV2D-24A0A075B6R9 120 aa9.54□□□□□ -0.88
CTSA-219ENST00000607841 TGIF2-C20orf24A0A0A6YYL0 155 aa9.54□□□□□ -0.88
CTSA-219ENST00000607841 ENHOQ6UWT2 76 aa9.54□□□□□ -0.88
CTSA-219ENST00000607841 C20orf203Q8NBC4 194 aa9.54□□□□□ -0.88
CTSA-219ENST00000607841 SMCO4Q9NRQ5 59 aa9.54□□□□□ -0.88
CTSA-219ENST00000607841 PRR34Q9NV39 138 aa9.54□□□□□ -0.88
CTSA-219ENST00000607841 FAT2Q9NYQ8 4349 aa9.54□□□□□ -0.88
CTSA-219ENST00000607841 IGLV4-60A0A075B6I1 120 aa9.53□□□□□ -0.88
CTSA-219ENST00000607841 LOC389332A0A1B0GUA5 103 aa9.53□□□□□ -0.88
CTSA-219ENST00000607841 REG3AQ06141 175 aa9.53□□□□□ -0.88
CTSA-219ENST00000607841 FABP9Q0Z7S8 132 aa9.53□□□□□ -0.88
CTSA-219ENST00000607841 KIAA1644Q3SXP7 199 aa9.53□□□□□ -0.88
CTSA-219ENST00000607841 C1orf43Q9BWL3 253 aa9.53□□□□□ -0.88
CTSA-219ENST00000607841 MRPL18Q9H0U6 180 aaKnown RBP9.53□□□□□ -0.88
CTSA-219ENST00000607841 DGAT2L7PQ6IED9 249 aa9.52□□□□□ -0.89
CTSA-219ENST00000607841 MRPL52Q86TS9 123 aaKnown RBP9.52□□□□□ -0.89
CTSA-219ENST00000607841 OR5A1Q8NGJ0 315 aa9.52□□□□□ -0.89
CTSA-219ENST00000607841 NXT2Q9NPJ8 142 aaKnown RBP9.52□□□□□ -0.89
CTSA-219ENST00000607841 TRAPPC1Q9Y5R8 145 aa9.52□□□□□ -0.89
CTSA-219ENST00000607841 TRAV8-4A0A0B4J246 113 aa9.51□□□□□ -0.89
CTSA-219ENST00000607841 A0A1B0GVY2 172 aa9.51□□□□□ -0.89
CTSA-219ENST00000607841 K7EMI3 77 aa9.51□□□□□ -0.89
CTSA-219ENST00000607841 CLPSL2Q6UWE3 100 aa9.51□□□□□ -0.89
CTSA-219ENST00000607841 Q8N8P6 123 aa9.51□□□□□ -0.89
CTSA-219ENST00000607841 A0A087WTM6 91 aa9.5□□□□□ -0.89
CTSA-219ENST00000607841 CSDC2Q9Y534 153 aaKnown RBP9.5□□□□□ -0.89
CTSA-219ENST00000607841 ORMDL2Q53FV1 153 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms