RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 NIT1Q86X76 327 aa9.67□□□□□ -0.86
CTSA-211ENST00000606066 I3L3M4 83 aa9.66□□□□□ -0.86
CTSA-211ENST00000606066 NCR2O95944 276 aa9.66□□□□□ -0.86
CTSA-211ENST00000606066 PPBPP02775 128 aa9.66□□□□□ -0.86
CTSA-211ENST00000606066 PMCHP20382 165 aa9.66□□□□□ -0.86
CTSA-211ENST00000606066 ELOBQ15370 118 aa9.66□□□□□ -0.86
CTSA-211ENST00000606066 PKD1P98161 4303 aa9.66□□□□□ -0.86
CTSA-211ENST00000606066 A0A1B0GVY2 172 aa9.65□□□□□ -0.86
CTSA-211ENST00000606066 IBA57-AS1B1ANH7 110 aa9.65□□□□□ -0.86
CTSA-211ENST00000606066 SMKR1H3BMG3 65 aa9.65□□□□□ -0.86
CTSA-211ENST00000606066 RTL8CO15255 209 aa9.65□□□□□ -0.86
CTSA-211ENST00000606066 GAS8-AS1O95177 125 aa9.65□□□□□ -0.86
CTSA-211ENST00000606066 RPS10P46783 165 aaKnown RBP9.65□□□□□ -0.86
CTSA-211ENST00000606066 TMEM243Q9BU79 118 aa9.65□□□□□ -0.86
CTSA-211ENST00000606066 TMEM70Q9BUB7 260 aa9.65□□□□□ -0.86
CTSA-211ENST00000606066 VCYO14598 125 aa9.64□□□□□ -0.87
CTSA-211ENST00000606066 AMTP48728 403 aa9.64□□□□□ -0.87
CTSA-211ENST00000606066 SUMO2P61956 95 aaKnown RBP9.64□□□□□ -0.87
CTSA-211ENST00000606066 LAGE3Q14657 143 aa9.64□□□□□ -0.87
CTSA-211ENST00000606066 SLC7A5P1Q8MH63 180 aa9.64□□□□□ -0.87
CTSA-211ENST00000606066 ORMDL3Q8N138 153 aa9.64□□□□□ -0.87
CTSA-211ENST00000606066 NRACQ8N912 160 aa9.64□□□□□ -0.87
CTSA-211ENST00000606066 C20orf78Q9BR46 151 aa9.64□□□□□ -0.87
CTSA-211ENST00000606066 TRBV24-1A0A075B6N3 115 aa9.63□□□□□ -0.87
CTSA-211ENST00000606066 TRBV27A0A0K0K1C4 114 aa9.63□□□□□ -0.87
CTSA-211ENST00000606066 PRSS29PA6NIE9 313 aa9.63□□□□□ -0.87
CTSA-211ENST00000606066 D6R8Y8 96 aa9.63□□□□□ -0.87
CTSA-211ENST00000606066 PHOX2AO14813 284 aa9.63□□□□□ -0.87
CTSA-211ENST00000606066 UBE2L6O14933 153 aa9.63□□□□□ -0.87
CTSA-211ENST00000606066 APCSP02743 223 aa9.63□□□□□ -0.87
CTSA-211ENST00000606066 POLR2KP53803 58 aaKnown RBP9.63□□□□□ -0.87
CTSA-211ENST00000606066 TRAV8-3A0A0A6YYJ7 113 aa9.62□□□□□ -0.87
CTSA-211ENST00000606066 TNFRSF6BO95407 300 aa9.62□□□□□ -0.87
CTSA-211ENST00000606066 GAGE6Q13070 117 aa9.62□□□□□ -0.87
CTSA-211ENST00000606066 COX19Q49B96 90 aa9.62□□□□□ -0.87
CTSA-211ENST00000606066 TMEM136Q6ZRR5 245 aa9.62□□□□□ -0.87
CTSA-211ENST00000606066 KIR2DL4Q99706 377 aa9.62□□□□□ -0.87
CTSA-211ENST00000606066 MPV17L2Q567V2 206 aa9.61□□□□□ -0.87
CTSA-211ENST00000606066 ATRAIDQ6UW56 229 aa9.61□□□□□ -0.87
CTSA-211ENST00000606066 Q8N3U1 123 aa9.61□□□□□ -0.87
CTSA-211ENST00000606066 DEFB104AQ8WTQ1 72 aa9.61□□□□□ -0.87
CTSA-211ENST00000606066 KLK12Q9UKR0 248 aa9.61□□□□□ -0.87
CTSA-211ENST00000606066 LAMTOR2Q9Y2Q5 125 aa9.61□□□□□ -0.87
CTSA-211ENST00000606066 H7C423 109 aa9.6□□□□□ -0.87
CTSA-211ENST00000606066 TCAPO15273 167 aa9.6□□□□□ -0.87
CTSA-211ENST00000606066 FCER1GP30273 86 aa9.6□□□□□ -0.87
CTSA-211ENST00000606066 RPL32P62910 135 aaKnown RBP9.6□□□□□ -0.87
CTSA-211ENST00000606066 PRELID3AQ96N28 172 aa9.6□□□□□ -0.87
CTSA-211ENST00000606066 GNB1LQ9BYB4 327 aa9.6□□□□□ -0.87
CTSA-211ENST00000606066 A0A1B0GUV1 79 aa9.59□□□□□ -0.87
CTSA-211ENST00000606066 TSHBP01222 138 aa9.59□□□□□ -0.87
CTSA-211ENST00000606066 HLA-DQA1P01909 254 aa9.59□□□□□ -0.87
CTSA-211ENST00000606066 ANGP03950 147 aaKnown RBP9.59□□□□□ -0.87
CTSA-211ENST00000606066 RBX1P62877 108 aa9.59□□□□□ -0.87
CTSA-211ENST00000606066 Q0VG73 95 aa9.59□□□□□ -0.87
CTSA-211ENST00000606066 Q8N976 141 aa9.59□□□□□ -0.87
CTSA-211ENST00000606066 RMI2Q96E14 147 aa9.59□□□□□ -0.87
CTSA-211ENST00000606066 TM2D2Q9BX73 214 aa9.59□□□□□ -0.87
CTSA-211ENST00000606066 Q9HAA7 133 aa9.59□□□□□ -0.87
CTSA-211ENST00000606066 HSPG2P98160 4391 aa9.58□□□□□ -0.88
CTSA-211ENST00000606066 PSCAO43653 123 aa9.58□□□□□ -0.88
CTSA-211ENST00000606066 NPYP01303 97 aa9.58□□□□□ -0.88
CTSA-211ENST00000606066 CRPP02741 224 aa9.58□□□□□ -0.88
CTSA-211ENST00000606066 MT-ND6P03923 174 aa9.58□□□□□ -0.88
CTSA-211ENST00000606066 AMMECR1LQ6DCA0 310 aa9.58□□□□□ -0.88
CTSA-211ENST00000606066 Q6ZRN7 208 aaPredicted RBP9.58□□□□□ -0.88
CTSA-211ENST00000606066 UBE2WQ96B02 151 aa9.58□□□□□ -0.88
CTSA-211ENST00000606066 COX11Q9Y6N1 276 aa9.58□□□□□ -0.88
CTSA-211ENST00000606066 ESDP10768 282 aa9.57□□□□□ -0.88
CTSA-211ENST00000606066 TNP2Q05952 138 aa9.57□□□□□ -0.88
CTSA-211ENST00000606066 SMIM2Q9BVW6 85 aa9.57□□□□□ -0.88
CTSA-211ENST00000606066 MAP1LC3AQ9H492 121 aa9.57□□□□□ -0.88
CTSA-211ENST00000606066 LRP1BQ9NZR2 4599 aa9.56□□□□□ -0.88
CTSA-211ENST00000606066 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.56□□□□□ -0.88
CTSA-211ENST00000606066 IGKV2-29A2NJV5 120 aaPredicted RBP9.56□□□□□ -0.88
CTSA-211ENST00000606066 SMAGPQ0VAQ4 97 aa9.56□□□□□ -0.88
CTSA-211ENST00000606066 TMEM18Q96B42 140 aa9.56□□□□□ -0.88
CTSA-211ENST00000606066 PRSS47A8MTI9 375 aa9.55□□□□□ -0.88
CTSA-211ENST00000606066 EREGO14944 169 aa9.55□□□□□ -0.88
CTSA-211ENST00000606066 FGF6P10767 208 aa9.55□□□□□ -0.88
CTSA-211ENST00000606066 ZNF25P17030 456 aaPredicted RBP9.55□□□□□ -0.88
CTSA-211ENST00000606066 RAB5AP20339 215 aa9.55□□□□□ -0.88
CTSA-211ENST00000606066 MIAQ16674 131 aa9.55□□□□□ -0.88
CTSA-211ENST00000606066 RNASEKQ6P5S7 137 aaKnown RBP9.55□□□□□ -0.88
CTSA-211ENST00000606066 LINC00269Q8N2A0 174 aa9.55□□□□□ -0.88
CTSA-211ENST00000606066 TMEM101Q96IK0 257 aa9.55□□□□□ -0.88
CTSA-211ENST00000606066 IGKV2D-24A0A075B6R9 120 aa9.54□□□□□ -0.88
CTSA-211ENST00000606066 TGIF2-C20orf24A0A0A6YYL0 155 aa9.54□□□□□ -0.88
CTSA-211ENST00000606066 ENHOQ6UWT2 76 aa9.54□□□□□ -0.88
CTSA-211ENST00000606066 C20orf203Q8NBC4 194 aa9.54□□□□□ -0.88
CTSA-211ENST00000606066 SMCO4Q9NRQ5 59 aa9.54□□□□□ -0.88
CTSA-211ENST00000606066 PRR34Q9NV39 138 aa9.54□□□□□ -0.88
CTSA-211ENST00000606066 IGLV4-60A0A075B6I1 120 aa9.53□□□□□ -0.88
CTSA-211ENST00000606066 LOC389332A0A1B0GUA5 103 aa9.53□□□□□ -0.88
CTSA-211ENST00000606066 REG3AQ06141 175 aa9.53□□□□□ -0.88
CTSA-211ENST00000606066 FABP9Q0Z7S8 132 aa9.53□□□□□ -0.88
CTSA-211ENST00000606066 KIAA1644Q3SXP7 199 aa9.53□□□□□ -0.88
CTSA-211ENST00000606066 C1orf43Q9BWL3 253 aa9.53□□□□□ -0.88
CTSA-211ENST00000606066 MRPL18Q9H0U6 180 aaKnown RBP9.53□□□□□ -0.88
CTSA-211ENST00000606066 DNAH5Q8TE73 4624 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 279.8 ms