RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 RS1O15537 224 aa10.86□□□□□ -0.67
CCDC12-211ENST00000604367 IGHV3-53P01767 116 aa10.86□□□□□ -0.67
CCDC12-211ENST00000604367 TMEM97Q5BJF2 176 aa10.86□□□□□ -0.67
CCDC12-211ENST00000604367 Q6ZTI0 123 aa10.86□□□□□ -0.67
CCDC12-211ENST00000604367 C20orf203Q8NBC4 194 aa10.86□□□□□ -0.67
CCDC12-211ENST00000604367 OR4C5Q8NGB2 326 aa10.86□□□□□ -0.67
CCDC12-211ENST00000604367 IL17DQ8TAD2 202 aa10.86□□□□□ -0.67
CCDC12-211ENST00000604367 CST9LQ9H4G1 147 aa10.86□□□□□ -0.67
CCDC12-211ENST00000604367 NOP10Q9NPE3 64 aaKnown RBP10.86□□□□□ -0.67
CCDC12-211ENST00000604367 ATRQ13535 2644 aa10.86□□□□□ -0.67
CCDC12-211ENST00000604367 IGHV3-38A0A0C4DH36 116 aa10.85□□□□□ -0.67
CCDC12-211ENST00000604367 MAPKAPK5-AS1Q8N8E1 139 aa10.85□□□□□ -0.67
CCDC12-211ENST00000604367 SIVA1O15304 175 aa10.85□□□□□ -0.67
CCDC12-211ENST00000604367 PHLDA1Q8WV24 401 aaPredicted RBP10.85□□□□□ -0.67
CCDC12-211ENST00000604367 IGLV4-69A0A075B6H9 119 aa10.84□□□□□ -0.67
CCDC12-211ENST00000604367 C11orf86A6NJI1 115 aa10.84□□□□□ -0.67
CCDC12-211ENST00000604367 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.84□□□□□ -0.67
CCDC12-211ENST00000604367 TRBV25-1A0A075B6N4 114 aa10.84□□□□□ -0.67
CCDC12-211ENST00000604367 SHISA2Q6UWI4 295 aa10.84□□□□□ -0.67
CCDC12-211ENST00000604367 F8P00451 2351 aa10.84□□□□□ -0.67
CCDC12-211ENST00000604367 CSNK1G2-AS1Q8NCQ2 148 aa10.83□□□□□ -0.68
CCDC12-211ENST00000604367 C1QTNF4Q9BXJ3 329 aa10.83□□□□□ -0.68
CCDC12-211ENST00000604367 HSD52Q0P140 79 aa10.83□□□□□ -0.68
CCDC12-211ENST00000604367 CEMP1Q6PRD7 247 aaPredicted RBP10.82□□□□□ -0.68
CCDC12-211ENST00000604367 OR11H2Q8NH07 326 aa10.82□□□□□ -0.68
CCDC12-211ENST00000604367 COX11Q9Y6N1 276 aa10.82□□□□□ -0.68
CCDC12-211ENST00000604367 TEP1Q99973 2627 aaKnown RBP10.81□□□□□ -0.68
CCDC12-211ENST00000604367 PLAC8L1A1L4L8 177 aa10.81□□□□□ -0.68
CCDC12-211ENST00000604367 RRN3P1Q2M238 152 aa10.81□□□□□ -0.68
CCDC12-211ENST00000604367 ZNRF2Q8NHG8 242 aa10.81□□□□□ -0.68
CCDC12-211ENST00000604367 PRADC1Q9BSG0 188 aa10.81□□□□□ -0.68
CCDC12-211ENST00000604367 CHAC1Q9BUX1 264 aa10.81□□□□□ -0.68
CCDC12-211ENST00000604367 TRRAPQ9Y4A5 3859 aa10.81□□□□□ -0.68
CCDC12-211ENST00000604367 TAX1BP3O14907 124 aa10.8□□□□□ -0.68
CCDC12-211ENST00000604367 TMEM170BQ5T4T1 132 aa10.8□□□□□ -0.68
CCDC12-211ENST00000604367 ORAOV1Q8WV07 137 aa10.8□□□□□ -0.68
CCDC12-211ENST00000604367 C16orf74Q96GX8 76 aa10.8□□□□□ -0.68
CCDC12-211ENST00000604367 IGLV4-3A0A075B6K6 122 aa10.8□□□□□ -0.68
CCDC12-211ENST00000604367 GAGE12BA1L429 117 aa10.8□□□□□ -0.68
CCDC12-211ENST00000604367 GAGE7O76087 117 aa10.8□□□□□ -0.68
CCDC12-211ENST00000604367 GAGE12FP0CL80 117 aa10.8□□□□□ -0.68
CCDC12-211ENST00000604367 GAGE12GP0CL81 117 aa10.8□□□□□ -0.68
CCDC12-211ENST00000604367 GAGE12IP0CL82 117 aa10.8□□□□□ -0.68
CCDC12-211ENST00000604367 DNAJC30Q96LL9 226 aa10.8□□□□□ -0.68
CCDC12-211ENST00000604367 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.79□□□□□ -0.68
CCDC12-211ENST00000604367 IGKV2-29A2NJV5 120 aaPredicted RBP10.79□□□□□ -0.68
CCDC12-211ENST00000604367 RNASE13Q5GAN3 156 aaKnown RBP10.79□□□□□ -0.68
CCDC12-211ENST00000604367 VCX2Q9H322 139 aa10.79□□□□□ -0.68
CCDC12-211ENST00000604367 TRGV2A0A075B6R0 118 aa10.79□□□□□ -0.68
CCDC12-211ENST00000604367 E9PLD3 99 aa10.79□□□□□ -0.68
CCDC12-211ENST00000604367 GCSHP23434 173 aa10.79□□□□□ -0.68
CCDC12-211ENST00000604367 DAZ2Q13117 558 aaKnown RBP10.79□□□□□ -0.68
CCDC12-211ENST00000604367 CHCHD7Q9BUK0 85 aa10.79□□□□□ -0.68
CCDC12-211ENST00000604367 HIGD1BQ9P298 99 aa10.79□□□□□ -0.68
CCDC12-211ENST00000604367 SEC11AP67812 179 aa10.78□□□□□ -0.68
CCDC12-211ENST00000604367 PAPPA-AS1Q5QFB9 102 aa10.78□□□□□ -0.68
CCDC12-211ENST00000604367 C9orf66Q5T8R8 295 aa10.78□□□□□ -0.68
CCDC12-211ENST00000604367 TRAV4A0A0B4J268 109 aa10.78□□□□□ -0.68
CCDC12-211ENST00000604367 CITED1Q99966 193 aa10.78□□□□□ -0.68
CCDC12-211ENST00000604367 MAST4O15021 2626 aa10.77□□□□□ -0.68
CCDC12-211ENST00000604367 MYMXA0A1B0GTQ4 84 aa10.77□□□□□ -0.68
CCDC12-211ENST00000604367 A4D1N5 150 aa10.77□□□□□ -0.68
CCDC12-211ENST00000604367 INSL3P51460 131 aa10.77□□□□□ -0.68
CCDC12-211ENST00000604367 SLC25A29Q8N8R3 303 aa10.77□□□□□ -0.68
CCDC12-211ENST00000604367 TRBV7-3A0A075B6L6 115 aa10.77□□□□□ -0.69
CCDC12-211ENST00000604367 K7EQD1 137 aa10.77□□□□□ -0.69
CCDC12-211ENST00000604367 NBEAL2Q6ZNJ1 2754 aa10.77□□□□□ -0.69
CCDC12-211ENST00000604367 FAM104AQ969W3 186 aa10.76□□□□□ -0.69
CCDC12-211ENST00000604367 A0A0J9YXV3 536 aa10.76□□□□□ -0.69
CCDC12-211ENST00000604367 HERVK_113P61574 105 aa10.76□□□□□ -0.69
CCDC12-211ENST00000604367 A6NDN8 102 aa10.75□□□□□ -0.69
CCDC12-211ENST00000604367 GAGE12JA6NER3 117 aa10.75□□□□□ -0.69
CCDC12-211ENST00000604367 ZNF815PA8K554 130 aa10.75□□□□□ -0.69
CCDC12-211ENST00000604367 FXYD2P54710 66 aa10.75□□□□□ -0.69
CCDC12-211ENST00000604367 GAGE4Q13068 117 aa10.75□□□□□ -0.69
CCDC12-211ENST00000604367 GAGE5Q13069 117 aa10.75□□□□□ -0.69
CCDC12-211ENST00000604367 GAGE13Q4V321 117 aa10.75□□□□□ -0.69
CCDC12-211ENST00000604367 UBE2D4Q9Y2X8 147 aa10.75□□□□□ -0.69
CCDC12-211ENST00000604367 PYGO1Q9Y3Y4 419 aa10.75□□□□□ -0.69
CCDC12-211ENST00000604367 RPL36AP83881 106 aaKnown RBP10.75□□□□□ -0.69
CCDC12-211ENST00000604367 UBE2V1Q13404 147 aa10.75□□□□□ -0.69
CCDC12-211ENST00000604367 VAMP3Q15836 100 aa10.75□□□□□ -0.69
CCDC12-211ENST00000604367 RPL36ALQ969Q0 106 aaKnown RBP10.75□□□□□ -0.69
CCDC12-211ENST00000604367 NFE4Q86UQ8 179 aa10.74□□□□□ -0.69
CCDC12-211ENST00000604367 RAB37Q96AX2 223 aa10.74□□□□□ -0.69
CCDC12-211ENST00000604367 IGHV3-64A0A075B6Q5 118 aa10.74□□□□□ -0.69
CCDC12-211ENST00000604367 OVOL2Q9BRP0 275 aa10.74□□□□□ -0.69
CCDC12-211ENST00000604367 SCGB1D4Q6XE38 83 aa10.73□□□□□ -0.69
CCDC12-211ENST00000604367 HIST1H4GQ99525 98 aa10.73□□□□□ -0.69
CCDC12-211ENST00000604367 TRBV10-1A0A0K0K1A3 114 aa10.73□□□□□ -0.69
CCDC12-211ENST00000604367 TSPEAR-AS2P59090 65 aa10.73□□□□□ -0.69
CCDC12-211ENST00000604367 OCIAD2Q56VL3 154 aa10.73□□□□□ -0.69
CCDC12-211ENST00000604367 CEND1Q8N111 149 aa10.73□□□□□ -0.69
CCDC12-211ENST00000604367 PLEKHB2Q96CS7 222 aa10.73□□□□□ -0.69
CCDC12-211ENST00000604367 AMELXQ99217 191 aa10.73□□□□□ -0.69
CCDC12-211ENST00000604367 LOC100131303A0A0U1RQF7 123 aa10.72□□□□□ -0.69
CCDC12-211ENST00000604367 Q6ZUT4 128 aa10.72□□□□□ -0.69
CCDC12-211ENST00000604367 NAA38Q9BRA0 125 aaKnown RBP10.72□□□□□ -0.69
CCDC12-211ENST00000604367 SPANXA1Q9NS26 97 aa10.72□□□□□ -0.69
CCDC12-211ENST00000604367 TRGV4A0A0C4DH28 118 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms