RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 TMEM243Q9BU79 118 aa13.76□□□□□ -0.21
PPFIA3-209ENST00000602783 KRTAP10-4P60372 401 aaPredicted RBP13.75□□□□□ -0.21
PPFIA3-209ENST00000602783 GATCO43716 136 aaKnown RBP13.74□□□□□ -0.21
PPFIA3-209ENST00000602783 TRAV26-2A0A0B4J265 109 aa13.73□□□□□ -0.21
PPFIA3-209ENST00000602783 REG3AQ06141 175 aa13.73□□□□□ -0.21
PPFIA3-209ENST00000602783 KRTAP26-1Q6PEX3 210 aa13.73□□□□□ -0.21
PPFIA3-209ENST00000602783 FAM231DQ6ZW35 169 aa13.73□□□□□ -0.21
PPFIA3-209ENST00000602783 GATD1Q8NB37 220 aa13.73□□□□□ -0.21
PPFIA3-209ENST00000602783 C20orf203Q8NBC4 194 aa13.73□□□□□ -0.21
PPFIA3-209ENST00000602783 IGLV10-54A0A075B6I4 117 aa13.72□□□□□ -0.21
PPFIA3-209ENST00000602783 PRSS1P07477 247 aa13.72□□□□□ -0.21
PPFIA3-209ENST00000602783 COTL1Q14019 142 aa13.72□□□□□ -0.21
PPFIA3-209ENST00000602783 LRP1Q07954 4544 aaKnown RBP13.72□□□□□ -0.21
PPFIA3-209ENST00000602783 IGLV4-60A0A075B6I1 120 aa13.71□□□□□ -0.21
PPFIA3-209ENST00000602783 AMTP48728 403 aa13.71□□□□□ -0.21
PPFIA3-209ENST00000602783 SMIM15Q7Z3B0 74 aa13.71□□□□□ -0.21
PPFIA3-209ENST00000602783 EIF5A2Q9GZV4 153 aaKnown RBP13.71□□□□□ -0.21
PPFIA3-209ENST00000602783 A0A1B0GUV1 79 aa13.7□□□□□ -0.22
PPFIA3-209ENST00000602783 UBE2L6O14933 153 aa13.7□□□□□ -0.22
PPFIA3-209ENST00000602783 FOXA3P55318 350 aaPredicted RBP13.7□□□□□ -0.22
PPFIA3-209ENST00000602783 RPL39LQ96EH5 51 aaKnown RBP13.7□□□□□ -0.22
PPFIA3-209ENST00000602783 SMIM7Q9BQ49 75 aa13.7□□□□□ -0.22
PPFIA3-209ENST00000602783 GFRA4Q9GZZ7 299 aa13.7□□□□□ -0.22
PPFIA3-209ENST00000602783 A8MWL6 223 aa13.69□□□□□ -0.22
PPFIA3-209ENST00000602783 CT83Q5H943 113 aa13.69□□□□□ -0.22
PPFIA3-209ENST00000602783 DGAT2L7PQ6IED9 249 aa13.69□□□□□ -0.22
PPFIA3-209ENST00000602783 A0A1B0GVG6 124 aa13.68□□□□□ -0.22
PPFIA3-209ENST00000602783 FAM210AQ96ND0 272 aa13.68□□□□□ -0.22
PPFIA3-209ENST00000602783 LINC01551Q86U37 167 aa13.67□□□□□ -0.22
PPFIA3-209ENST00000602783 C9orf163Q8N9P6 203 aa13.67□□□□□ -0.22
PPFIA3-209ENST00000602783 TRAV8-4A0A0B4J246 113 aa13.66□□□□□ -0.22
PPFIA3-209ENST00000602783 NDUFS6O75380 124 aaKnown RBP13.66□□□□□ -0.22
PPFIA3-209ENST00000602783 ZNF727A8MUV8 499 aa13.65□□□□□ -0.22
PPFIA3-209ENST00000602783 OXTP01178 125 aa13.65□□□□□ -0.22
PPFIA3-209ENST00000602783 SRP19P09132 144 aaKnown RBP13.65□□□□□ -0.22
PPFIA3-209ENST00000602783 RPL37AP61513 92 aaKnown RBP13.65□□□□□ -0.22
PPFIA3-209ENST00000602783 BORCS7Q96B45 105 aa13.65□□□□□ -0.22
PPFIA3-209ENST00000602783 FAT3Q8TDW7 4589 aa13.65□□□□□ -0.22
PPFIA3-209ENST00000602783 TEX261Q6UWH6 196 aa13.64□□□□□ -0.23
PPFIA3-209ENST00000602783 SDHAF1A6NFY7 115 aa13.63□□□□□ -0.23
PPFIA3-209ENST00000602783 APCSP02743 223 aa13.63□□□□□ -0.23
PPFIA3-209ENST00000602783 CLRN3Q8NCR9 226 aa13.63□□□□□ -0.23
PPFIA3-209ENST00000602783 TSKUQ8WUA8 353 aa13.63□□□□□ -0.23
PPFIA3-209ENST00000602783 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.63□□□□□ -0.23
PPFIA3-209ENST00000602783 HIGD1CA8MV81 97 aa13.62□□□□□ -0.23
PPFIA3-209ENST00000602783 NCR2O95944 276 aa13.62□□□□□ -0.23
PPFIA3-209ENST00000602783 SERTAD4-AS1Q5TG53 156 aa13.62□□□□□ -0.23
PPFIA3-209ENST00000602783 OSTCQ9NRP0 149 aa13.62□□□□□ -0.23
PPFIA3-209ENST00000602783 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.61□□□□□ -0.23
PPFIA3-209ENST00000602783 A0A1B0GUT8 65 aa13.61□□□□□ -0.23
PPFIA3-209ENST00000602783 IGKV2-29A2NJV5 120 aaPredicted RBP13.61□□□□□ -0.23
PPFIA3-209ENST00000602783 SDIM1Q6ZPB5 146 aa13.61□□□□□ -0.23
PPFIA3-209ENST00000602783 IGKV3OR2-268A0A0C4DH90 116 aa13.6□□□□□ -0.23
PPFIA3-209ENST00000602783 hDV102S1A0JD36 115 aa13.6□□□□□ -0.23
PPFIA3-209ENST00000602783 PANO1I0J062 215 aa13.6□□□□□ -0.23
PPFIA3-209ENST00000602783 AMMECR1LQ6DCA0 310 aa13.6□□□□□ -0.23
PPFIA3-209ENST00000602783 GAS8-AS1O95177 125 aa13.59□□□□□ -0.23
PPFIA3-209ENST00000602783 RNASEKQ6P5S7 137 aaKnown RBP13.59□□□□□ -0.23
PPFIA3-209ENST00000602783 PKHD1L1Q86WI1 4243 aa13.59□□□□□ -0.23
PPFIA3-209ENST00000602783 TRBV6-5A0A0K0K1A5 114 aa13.58□□□□□ -0.24
PPFIA3-209ENST00000602783 FAM231BA6NCW3 169 aa13.58□□□□□ -0.24
PPFIA3-209ENST00000602783 I3L3M4 83 aa13.58□□□□□ -0.24
PPFIA3-209ENST00000602783 HNRNPA3P51991 378 aaKnown RBP13.58□□□□□ -0.24
PPFIA3-209ENST00000602783 CNBPP62633 177 aaKnown RBP13.58□□□□□ -0.24
PPFIA3-209ENST00000602783 TMEM191AQ9H0A3 160 aa13.58□□□□□ -0.24
PPFIA3-209ENST00000602783 V9GYV3 84 aa13.58□□□□□ -0.24
PPFIA3-209ENST00000602783 GAGE12HA6NDE8 117 aa13.57□□□□□ -0.24
PPFIA3-209ENST00000602783 H7C423 109 aa13.57□□□□□ -0.24
PPFIA3-209ENST00000602783 FGF6P10767 208 aa13.57□□□□□ -0.24
PPFIA3-209ENST00000602783 PMCHP20382 165 aa13.57□□□□□ -0.24
PPFIA3-209ENST00000602783 ISOC2Q96AB3 205 aa13.57□□□□□ -0.24
PPFIA3-209ENST00000602783 RNF185Q96GF1 192 aa13.56□□□□□ -0.24
PPFIA3-209ENST00000602783 ST20Q9HBF5 79 aa13.56□□□□□ -0.24
PPFIA3-209ENST00000602783 AP5S1Q9NUS5 200 aa13.56□□□□□ -0.24
PPFIA3-209ENST00000602783 HMCN2Q8NDA2 5059 aa13.55□□□□□ -0.24
PPFIA3-209ENST00000602783 RPS10P46783 165 aaKnown RBP13.55□□□□□ -0.24
PPFIA3-209ENST00000602783 AMN1Q8IY45 258 aa13.55□□□□□ -0.24
PPFIA3-209ENST00000602783 C15orf56Q8N910 161 aa13.55□□□□□ -0.24
PPFIA3-209ENST00000602783 TMEM242Q9NWH2 141 aa13.55□□□□□ -0.24
PPFIA3-209ENST00000602783 TSHBP01222 138 aa13.54□□□□□ -0.24
PPFIA3-209ENST00000602783 RAB4AP20338 218 aa13.54□□□□□ -0.24
PPFIA3-209ENST00000602783 RPL23P62829 140 aaKnown RBP13.54□□□□□ -0.24
PPFIA3-209ENST00000602783 ADIRFQ15847 76 aa13.54□□□□□ -0.24
PPFIA3-209ENST00000602783 TMEM241Q24JQ0 296 aa13.54□□□□□ -0.24
PPFIA3-209ENST00000602783 FAM74A3Q4VXF1 159 aa13.54□□□□□ -0.24
PPFIA3-209ENST00000602783 NUP35Q8NFH5 326 aa13.54□□□□□ -0.24
PPFIA3-209ENST00000602783 DPH3Q96FX2 82 aa13.54□□□□□ -0.24
PPFIA3-209ENST00000602783 MRAP2Q96G30 205 aa13.54□□□□□ -0.24
PPFIA3-209ENST00000602783 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.53□□□□□ -0.24
PPFIA3-209ENST00000602783 C9JQL5 133 aa13.53□□□□□ -0.24
PPFIA3-209ENST00000602783 SLPIP03973 132 aa13.53□□□□□ -0.24
PPFIA3-209ENST00000602783 ZNF25P17030 456 aaPredicted RBP13.53□□□□□ -0.24
PPFIA3-209ENST00000602783 RIGQ13278 110 aa13.53□□□□□ -0.24
PPFIA3-209ENST00000602783 CHCHD10Q8WYQ3 142 aaPredicted RBP13.53□□□□□ -0.24
PPFIA3-209ENST00000602783 IGHV3-64A0A075B6Q5 118 aa13.52□□□□□ -0.25
PPFIA3-209ENST00000602783 ESDP10768 282 aa13.52□□□□□ -0.25
PPFIA3-209ENST00000602783 CIRBPQ14011 172 aaKnown RBP13.52□□□□□ -0.25
PPFIA3-209ENST00000602783 SMKR1H3BMG3 65 aa13.51□□□□□ -0.25
PPFIA3-209ENST00000602783 POLR2KP53803 58 aaKnown RBP13.51□□□□□ -0.25
PPFIA3-209ENST00000602783 SRSF3P84103 164 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms