RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	SULT1A2	P50226	295 aa		11.25	□□□□□ -0.61
IRF3-231	ENST00000602190	FOXI1	Q12951	378 aa		11.24	□□□□□ -0.61
IRF3-231	ENST00000602190	MBD3L1	Q8WWY6	194 aa		11.24	□□□□□ -0.61
IRF3-231	ENST00000602190	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.24	□□□□□ -0.61
IRF3-231	ENST00000602190	MGP	P08493	103 aa		11.23	□□□□□ -0.61
IRF3-231	ENST00000602190	AMT	P48728	403 aa		11.23	□□□□□ -0.61
IRF3-231	ENST00000602190	SST	P61278	116 aa		11.22	□□□□□ -0.61
IRF3-231	ENST00000602190	CACNG7	P62955	275 aa		11.22	□□□□□ -0.61
IRF3-231	ENST00000602190	COTL1	Q14019	142 aa		11.22	□□□□□ -0.61
IRF3-231	ENST00000602190	FER1L6-AS1	Q8NA97	138 aa		11.22	□□□□□ -0.61
IRF3-231	ENST00000602190	KRTAP9-2	Q9BYQ4	174 aa		11.22	□□□□□ -0.61
IRF3-231	ENST00000602190	PKIG	Q9Y2B9	76 aa		11.22	□□□□□ -0.61
IRF3-231	ENST00000602190	C19orf71	A6NCJ1	209 aa		11.21	□□□□□ -0.61
IRF3-231	ENST00000602190	UBE2L6	O14933	153 aa		11.21	□□□□□ -0.61
IRF3-231	ENST00000602190	MUC2	Q02817	5179 aa		11.2	□□□□□ -0.62
IRF3-231	ENST00000602190	FXYD6-FXYD2	A0A087WZ82	144 aa		11.2	□□□□□ -0.62
IRF3-231	ENST00000602190	TMUB2	Q71RG4	321 aa		11.2	□□□□□ -0.62
IRF3-231	ENST00000602190	C11orf52	Q96A22	123 aa		11.2	□□□□□ -0.62
IRF3-231	ENST00000602190		H7C423	109 aa		11.19	□□□□□ -0.62
IRF3-231	ENST00000602190	NTF3	P20783	257 aa		11.19	□□□□□ -0.62
IRF3-231	ENST00000602190	RPS20	P60866	119 aa	Known RBP	11.19	□□□□□ -0.62
IRF3-231	ENST00000602190	CNFN	Q9BYD5	112 aa		11.19	□□□□□ -0.62
IRF3-231	ENST00000602190		F2Z2F3	143 aa		11.18	□□□□□ -0.62
IRF3-231	ENST00000602190	RPL35	P42766	123 aa	Known RBP	11.18	□□□□□ -0.62
IRF3-231	ENST00000602190	NCR2	O95944	276 aa		11.17	□□□□□ -0.62
IRF3-231	ENST00000602190	TRGC1	P0CF51	173 aa		11.17	□□□□□ -0.62
IRF3-231	ENST00000602190	CARD19	Q96LW7	228 aa		11.17	□□□□□ -0.62
IRF3-231	ENST00000602190	IGHV1-58	A0A0C4DH39	117 aa		11.16	□□□□□ -0.62
IRF3-231	ENST00000602190	FAM231B	A6NCW3	169 aa		11.16	□□□□□ -0.62
IRF3-231	ENST00000602190	PFDN1	O60925	122 aa		11.16	□□□□□ -0.62
IRF3-231	ENST00000602190	PTTG1IP	P53801	180 aa		11.16	□□□□□ -0.62
IRF3-231	ENST00000602190		Q6ZNX1	250 aa		11.16	□□□□□ -0.62
IRF3-231	ENST00000602190	OR5A1	Q8NGJ0	315 aa		11.16	□□□□□ -0.62
IRF3-231	ENST00000602190	SFT2D1	Q8WV19	159 aa		11.16	□□□□□ -0.62
IRF3-231	ENST00000602190	SMIM12	Q96EX1	92 aa		11.16	□□□□□ -0.62
IRF3-231	ENST00000602190	IGKV3OR2-268	A0A0C4DH90	116 aa		11.15	□□□□□ -0.62
IRF3-231	ENST00000602190	CTRL	P40313	264 aa		11.15	□□□□□ -0.62
IRF3-231	ENST00000602190	ZNF664	Q8N3J9	261 aa		11.15	□□□□□ -0.62
IRF3-231	ENST00000602190	GATD1	Q8NB37	220 aa		11.15	□□□□□ -0.62
IRF3-231	ENST00000602190	OR2D3	Q8NGH3	330 aa		11.15	□□□□□ -0.62
IRF3-231	ENST00000602190	PSORS1C2	Q9UIG4	136 aa		11.15	□□□□□ -0.62
IRF3-231	ENST00000602190	FGF6	P10767	208 aa		11.14	□□□□□ -0.63
IRF3-231	ENST00000602190	ZNF25	P17030	456 aa	Predicted RBP	11.14	□□□□□ -0.63
IRF3-231	ENST00000602190	C9orf62	Q8N4C0	152 aa		11.14	□□□□□ -0.63
IRF3-231	ENST00000602190	TPPP3	Q9BW30	176 aa		11.14	□□□□□ -0.63
IRF3-231	ENST00000602190		A0A1W2PNN7	141 aa		11.13	□□□□□ -0.63
IRF3-231	ENST00000602190	UMAD1	C9J7I0	102 aa		11.13	□□□□□ -0.63
IRF3-231	ENST00000602190	CENPW	Q5EE01	88 aa		11.13	□□□□□ -0.63
IRF3-231	ENST00000602190	LYZL1	Q6UWQ5	148 aa		11.13	□□□□□ -0.63
IRF3-231	ENST00000602190	LINC00526	Q96FQ7	95 aa		11.13	□□□□□ -0.63
IRF3-231	ENST00000602190	LINC00959	A0A1B0GUT2	108 aa		11.12	□□□□□ -0.63
IRF3-231	ENST00000602190	SYCN	Q0VAF6	134 aa		11.12	□□□□□ -0.63
IRF3-231	ENST00000602190	KCNRG	Q8N5I3	272 aa		11.12	□□□□□ -0.63
IRF3-231	ENST00000602190	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.11	□□□□□ -0.63
IRF3-231	ENST00000602190	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.11	□□□□□ -0.63
IRF3-231	ENST00000602190	AMMECR1L	Q6DCA0	310 aa		11.11	□□□□□ -0.63
IRF3-231	ENST00000602190	FAM213B	Q8TBF2	198 aa		11.11	□□□□□ -0.63
IRF3-231	ENST00000602190	TRBV20OR9-2	A0A075B6H5	130 aa		11.1	□□□□□ -0.63
IRF3-231	ENST00000602190	CCL25	O15444	150 aa		11.1	□□□□□ -0.63
IRF3-231	ENST00000602190	ARPC5	O15511	151 aa		11.1	□□□□□ -0.63
IRF3-231	ENST00000602190	ESD	P10768	282 aa		11.1	□□□□□ -0.63
IRF3-231	ENST00000602190	XCL1	P47992	114 aa		11.1	□□□□□ -0.63
IRF3-231	ENST00000602190	LCE2A	Q5TA79	106 aa	Predicted RBP	11.1	□□□□□ -0.63
IRF3-231	ENST00000602190	LOC107984640	A0A0U1RRK4	108 aa		11.09	□□□□□ -0.63
IRF3-231	ENST00000602190	XKRY2	A2RUG3	117 aa		11.09	□□□□□ -0.63
IRF3-231	ENST00000602190	CCL20	P78556	96 aa		11.09	□□□□□ -0.63
IRF3-231	ENST00000602190	ZNF345	Q14585	488 aa		11.09	□□□□□ -0.63
IRF3-231	ENST00000602190	RNASEK	Q6P5S7	137 aa	Known RBP	11.09	□□□□□ -0.63
IRF3-231	ENST00000602190	TRAV26-2	A0A0B4J265	109 aa		11.08	□□□□□ -0.64
IRF3-231	ENST00000602190		A0A1B0GV50	99 aa		11.08	□□□□□ -0.64
IRF3-231	ENST00000602190	APCS	P02743	223 aa		11.08	□□□□□ -0.64
IRF3-231	ENST00000602190	CD164L2	Q6UWJ8	174 aa		11.08	□□□□□ -0.64
IRF3-231	ENST00000602190	PRR26	Q8N8Z3	221 aa		11.08	□□□□□ -0.64
IRF3-231	ENST00000602190	NUP35	Q8NFH5	326 aa		11.08	□□□□□ -0.64
IRF3-231	ENST00000602190	RPL39L	Q96EH5	51 aa	Known RBP	11.08	□□□□□ -0.64
IRF3-231	ENST00000602190	IFNA1	P01562	189 aa		11.07	□□□□□ -0.64
IRF3-231	ENST00000602190	H2AFB1	P0C5Y9	115 aa		11.07	□□□□□ -0.64
IRF3-231	ENST00000602190	CAMP	P49913	170 aa		11.07	□□□□□ -0.64
IRF3-231	ENST00000602190	MRPL52	Q86TS9	123 aa	Known RBP	11.07	□□□□□ -0.64
IRF3-231	ENST00000602190	MANBAL	Q9NQG1	85 aa		11.07	□□□□□ -0.64
IRF3-231	ENST00000602190	TRAV1-1	A0A0B4J248	108 aa		11.06	□□□□□ -0.64
IRF3-231	ENST00000602190	TRBV6-5	A0A0K0K1A5	114 aa		11.06	□□□□□ -0.64
IRF3-231	ENST00000602190	SDHAF1	A6NFY7	115 aa		11.06	□□□□□ -0.64
IRF3-231	ENST00000602190	FAM210A	Q96ND0	272 aa		11.06	□□□□□ -0.64
IRF3-231	ENST00000602190	RAB19	A4D1S5	217 aa		11.05	□□□□□ -0.64
IRF3-231	ENST00000602190	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.05	□□□□□ -0.64
IRF3-231	ENST00000602190	ZNF561-AS1	K7EIQ3	104 aa		11.05	□□□□□ -0.64
IRF3-231	ENST00000602190	KRTAP1-4	P0C5Y4	121 aa		11.05	□□□□□ -0.64
IRF3-231	ENST00000602190	MEF2B	Q02080	365 aa	Predicted RBP	11.05	□□□□□ -0.64
IRF3-231	ENST00000602190	C9orf116	Q5BN46	136 aa	Predicted RBP	11.05	□□□□□ -0.64
IRF3-231	ENST00000602190	CDC42SE2	Q9NRR3	84 aa		11.05	□□□□□ -0.64
IRF3-231	ENST00000602190	IGLV4-69	A0A075B6H9	119 aa		11.04	□□□□□ -0.64
IRF3-231	ENST00000602190	GAGE2B	Q13066	116 aa		11.04	□□□□□ -0.64
IRF3-231	ENST00000602190	APOM	O95445	188 aa		11.03	□□□□□ -0.64
IRF3-231	ENST00000602190	MT-ND6	P03923	174 aa		11.03	□□□□□ -0.64
IRF3-231	ENST00000602190	IGLV7-43	P04211	117 aa		11.03	□□□□□ -0.64
IRF3-231	ENST00000602190	BCL2	P10415	239 aa		11.03	□□□□□ -0.64
IRF3-231	ENST00000602190	GNG4	P50150	75 aa		11.03	□□□□□ -0.64
IRF3-231	ENST00000602190	TEX261	Q6UWH6	196 aa		11.03	□□□□□ -0.64
IRF3-231	ENST00000602190	NUDT10	Q8NFP7	164 aa		11.03	□□□□□ -0.64

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