RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 COTL1Q14019 142 aa10.11□□□□□ -0.79
ZNF548-212ENST00000602086 C12orf74Q32Q52 190 aa10.11□□□□□ -0.79
ZNF548-212ENST00000602086 TMEM97Q5BJF2 176 aa10.11□□□□□ -0.79
ZNF548-212ENST00000602086 C2orf66Q6UXQ4 117 aa10.11□□□□□ -0.79
ZNF548-212ENST00000602086 LINC00518Q8N0U6 118 aa10.11□□□□□ -0.79
ZNF548-212ENST00000602086 C20orf203Q8NBC4 194 aa10.11□□□□□ -0.79
ZNF548-212ENST00000602086 IFI27L1Q96BM0 104 aa10.11□□□□□ -0.79
ZNF548-212ENST00000602086 B9D2Q9BPU9 175 aa10.11□□□□□ -0.79
ZNF548-212ENST00000602086 GTSF1LQ9H1H1 148 aa10.11□□□□□ -0.79
ZNF548-212ENST00000602086 ZMAT4Q9H898 229 aa10.11□□□□□ -0.79
ZNF548-212ENST00000602086 NPSP0C0P6 89 aa10.1□□□□□ -0.79
ZNF548-212ENST00000602086 KRTDAPP60985 99 aa10.1□□□□□ -0.79
ZNF548-212ENST00000602086 LINC00173Q6ZV60 143 aa10.1□□□□□ -0.79
ZNF548-212ENST00000602086 ERASQ7Z444 233 aa10.1□□□□□ -0.79
ZNF548-212ENST00000602086 KMT2CQ8NEZ4 4911 aaKnown RBP10.1□□□□□ -0.79
ZNF548-212ENST00000602086 GAGE12JA6NER3 117 aa10.09□□□□□ -0.79
ZNF548-212ENST00000602086 H3BNG1 76 aa10.09□□□□□ -0.79
ZNF548-212ENST00000602086 PAX4O43316 350 aa10.09□□□□□ -0.79
ZNF548-212ENST00000602086 GAGE1Q13065 139 aa10.09□□□□□ -0.79
ZNF548-212ENST00000602086 GAGE4Q13068 117 aa10.09□□□□□ -0.79
ZNF548-212ENST00000602086 GAGE5Q13069 117 aa10.09□□□□□ -0.79
ZNF548-212ENST00000602086 GAGE13Q4V321 117 aa10.09□□□□□ -0.79
ZNF548-212ENST00000602086 TIMM17AQ99595 171 aa10.09□□□□□ -0.79
ZNF548-212ENST00000602086 TRAV26-1A0A087WT03 109 aa10.08□□□□□ -0.8
ZNF548-212ENST00000602086 A0A0J9YWU9 116 aa10.08□□□□□ -0.8
ZNF548-212ENST00000602086 C20orf202A1L168 122 aa10.08□□□□□ -0.8
ZNF548-212ENST00000602086 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.08□□□□□ -0.8
ZNF548-212ENST00000602086 SH2D6Q7Z4S9 175 aa10.08□□□□□ -0.8
ZNF548-212ENST00000602086 Q8N976 141 aa10.08□□□□□ -0.8
ZNF548-212ENST00000602086 TMEM141Q96I45 108 aa10.08□□□□□ -0.8
ZNF548-212ENST00000602086 SCGB3A1Q96QR1 104 aa10.08□□□□□ -0.8
ZNF548-212ENST00000602086 PYGO1Q9Y3Y4 419 aa10.08□□□□□ -0.8
ZNF548-212ENST00000602086 IGIPA6NJ69 53 aa10.07□□□□□ -0.8
ZNF548-212ENST00000602086 SCGB1D1O95968 90 aa10.07□□□□□ -0.8
ZNF548-212ENST00000602086 LINC01545Q5VT33 79 aa10.07□□□□□ -0.8
ZNF548-212ENST00000602086 LGALS9CQ6DKI2 356 aa10.07□□□□□ -0.8
ZNF548-212ENST00000602086 VSIG2Q96IQ7 327 aa10.07□□□□□ -0.8
ZNF548-212ENST00000602086 CHCHD7Q9BUK0 85 aa10.07□□□□□ -0.8
ZNF548-212ENST00000602086 TIMM21Q9BVV7 248 aa10.07□□□□□ -0.8
ZNF548-212ENST00000602086 TRAV12-1A0A0B4J245 112 aa10.06□□□□□ -0.8
ZNF548-212ENST00000602086 H7C423 109 aa10.06□□□□□ -0.8
ZNF548-212ENST00000602086 NHLRC4P0CG21 123 aaPredicted RBP10.06□□□□□ -0.8
ZNF548-212ENST00000602086 GYPEP15421 78 aa10.06□□□□□ -0.8
ZNF548-212ENST00000602086 SMAGPQ0VAQ4 97 aa10.06□□□□□ -0.8
ZNF548-212ENST00000602086 C11orf45Q8TAV5 145 aa10.06□□□□□ -0.8
ZNF548-212ENST00000602086 PHLDA1Q8WV24 401 aaPredicted RBP10.06□□□□□ -0.8
ZNF548-212ENST00000602086 C12orf57Q99622 126 aa10.06□□□□□ -0.8
ZNF548-212ENST00000602086 RYR3Q15413 4870 aa10.06□□□□□ -0.8
ZNF548-212ENST00000602086 LOC100131303A0A0U1RQF7 123 aa10.05□□□□□ -0.8
ZNF548-212ENST00000602086 F5H768 121 aa10.05□□□□□ -0.8
ZNF548-212ENST00000602086 PAPPA-AS1Q5QFB9 102 aa10.05□□□□□ -0.8
ZNF548-212ENST00000602086 ATP6V0E2Q8NHE4 81 aa10.05□□□□□ -0.8
ZNF548-212ENST00000602086 SPANXA1Q9NS26 97 aa10.05□□□□□ -0.8
ZNF548-212ENST00000602086 IGHV3-38A0A0C4DH36 116 aa10.04□□□□□ -0.8
ZNF548-212ENST00000602086 RPL39P62891 51 aaKnown RBP10.04□□□□□ -0.8
ZNF548-212ENST00000602086 MRPL23Q16540 153 aaKnown RBP10.04□□□□□ -0.8
ZNF548-212ENST00000602086 Q6ZN92 141 aa10.04□□□□□ -0.8
ZNF548-212ENST00000602086 TEX43Q6ZNM6 134 aa10.04□□□□□ -0.8
ZNF548-212ENST00000602086 NTM-AS1Q6ZSK4 140 aa10.04□□□□□ -0.8
ZNF548-212ENST00000602086 CSDC2Q9Y534 153 aaKnown RBP10.04□□□□□ -0.8
ZNF548-212ENST00000602086 TRBV25-1A0A075B6N4 114 aa10.03□□□□□ -0.8
ZNF548-212ENST00000602086 PRSS1P07477 247 aa10.03□□□□□ -0.8
ZNF548-212ENST00000602086 MRPL52Q86TS9 123 aaKnown RBP10.03□□□□□ -0.8
ZNF548-212ENST00000602086 HUWE1Q7Z6Z7 4374 aaKnown RBP10.02□□□□□ -0.81
ZNF548-212ENST00000602086 TRBV6-8A0A0A6YYG3 113 aa10.02□□□□□ -0.81
ZNF548-212ENST00000602086 TIRAPP58753 221 aa10.02□□□□□ -0.81
ZNF548-212ENST00000602086 MRPS36P82909 103 aaKnown RBP10.02□□□□□ -0.81
ZNF548-212ENST00000602086 Q6ZTC4 211 aa10.02□□□□□ -0.81
ZNF548-212ENST00000602086 TMEM243Q9BU79 118 aa10.02□□□□□ -0.81
ZNF548-212ENST00000602086 ICOSQ9Y6W8 199 aa10.02□□□□□ -0.81
ZNF548-212ENST00000602086 TENM3Q9P273 2699 aa10.01□□□□□ -0.81
ZNF548-212ENST00000602086 A0A087WX48 190 aa10.01□□□□□ -0.81
ZNF548-212ENST00000602086 S100A12P80511 92 aa10.01□□□□□ -0.81
ZNF548-212ENST00000602086 ODF1Q14990 250 aa10.01□□□□□ -0.81
ZNF548-212ENST00000602086 BAALCQ8WXS3 180 aa10.01□□□□□ -0.81
ZNF548-212ENST00000602086 UBE2D4Q9Y2X8 147 aa10.01□□□□□ -0.81
ZNF548-212ENST00000602086 TRAV10A0A0B4J240 114 aa10□□□□□ -0.81
ZNF548-212ENST00000602086 A0A0J9YY99 117 aa10□□□□□ -0.81
ZNF548-212ENST00000602086 HTN3P15516 51 aa10□□□□□ -0.81
ZNF548-212ENST00000602086 NANOS2P60321 138 aaKnown RBP10□□□□□ -0.81
ZNF548-212ENST00000602086 PMVKQ15126 192 aa10□□□□□ -0.81
ZNF548-212ENST00000602086 DEFB104AQ8WTQ1 72 aa10□□□□□ -0.81
ZNF548-212ENST00000602086 DNAH9Q9NYC9 4486 aa10□□□□□ -0.81
ZNF548-212ENST00000602086 IGLV4-3A0A075B6K6 122 aa9.99□□□□□ -0.81
ZNF548-212ENST00000602086 DEFB131BA0A096LNP1 70 aa9.99□□□□□ -0.81
ZNF548-212ENST00000602086 ZNF25P17030 456 aaPredicted RBP9.99□□□□□ -0.81
ZNF548-212ENST00000602086 AMELXQ99217 191 aa9.99□□□□□ -0.81
ZNF548-212ENST00000602086 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.98□□□□□ -0.81
ZNF548-212ENST00000602086 A0A096LPF7 62 aa9.98□□□□□ -0.81
ZNF548-212ENST00000602086 IGKV2-29A2NJV5 120 aaPredicted RBP9.98□□□□□ -0.81
ZNF548-212ENST00000602086 F8VRH5 84 aa9.98□□□□□ -0.81
ZNF548-212ENST00000602086 CDPF1Q6NVV7 123 aa9.98□□□□□ -0.81
ZNF548-212ENST00000602086 CST9LQ9H4G1 147 aa9.98□□□□□ -0.81
ZNF548-212ENST00000602086 TRAV9-2A0A087WT02 112 aa9.97□□□□□ -0.81
ZNF548-212ENST00000602086 PRSS29PA6NIE9 313 aa9.97□□□□□ -0.81
ZNF548-212ENST00000602086 H0Y8G0 127 aa9.97□□□□□ -0.81
ZNF548-212ENST00000602086 UBE2L6O14933 153 aa9.97□□□□□ -0.81
ZNF548-212ENST00000602086 FGF6P10767 208 aa9.97□□□□□ -0.81
ZNF548-212ENST00000602086 PLNP26678 52 aa9.97□□□□□ -0.81
ZNF548-212ENST00000602086 PKIAP61925 76 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms