RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, humanhuman

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-211ENST00000601685 EDA2RQ9HAV5 297 aa12.18□□□□□ -0.46
CAPN12-211ENST00000601685 SNRPD3P62318 126 aaKnown RBP12.18□□□□□ -0.46
CAPN12-211ENST00000601685 MRPL23Q16540 153 aaKnown RBP12.17□□□□□ -0.46
CAPN12-211ENST00000601685 K7EQG2 157 aa12.17□□□□□ -0.46
CAPN12-211ENST00000601685 CEMP1Q6PRD7 247 aaPredicted RBP12.17□□□□□ -0.46
CAPN12-211ENST00000601685 VSIG2Q96IQ7 327 aa12.17□□□□□ -0.46
CAPN12-211ENST00000601685 MAP1AP78559 2803 aaPredicted RBP12.16□□□□□ -0.46
CAPN12-211ENST00000601685 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.16□□□□□ -0.46
CAPN12-211ENST00000601685 TRGV11A0A075B6L2 103 aa12.16□□□□□ -0.46
CAPN12-211ENST00000601685 GNLYP22749 145 aa12.16□□□□□ -0.46
CAPN12-211ENST00000601685 Q6ZSV7 163 aa12.16□□□□□ -0.46
CAPN12-211ENST00000601685 PIMREGQ9BSJ6 248 aa12.16□□□□□ -0.46
CAPN12-211ENST00000601685 CLEC2BQ92478 149 aa12.16□□□□□ -0.46
CAPN12-211ENST00000601685 TINCRA0A1B0GVN0 87 aa12.15□□□□□ -0.46
CAPN12-211ENST00000601685 LST1O00453 97 aa12.15□□□□□ -0.46
CAPN12-211ENST00000601685 RNASE13Q5GAN3 156 aaKnown RBP12.15□□□□□ -0.46
CAPN12-211ENST00000601685 DEFB121Q5J5C9 76 aa12.15□□□□□ -0.46
CAPN12-211ENST00000601685 SPG11Q96JI7 2443 aa12.15□□□□□ -0.46
CAPN12-211ENST00000601685 TMEM61Q8N0U2 210 aa12.15□□□□□ -0.47
CAPN12-211ENST00000601685 FAM240AA0A1B0GVK7 77 aa12.14□□□□□ -0.47
CAPN12-211ENST00000601685 A8MZ25 164 aa12.14□□□□□ -0.47
CAPN12-211ENST00000601685 NPC2P61916 151 aa12.14□□□□□ -0.47
CAPN12-211ENST00000601685 YAE1D1Q9NRH1 226 aa12.14□□□□□ -0.47
CAPN12-211ENST00000601685 IGHV3-73A0A0B4J1V6 119 aa12.14□□□□□ -0.47
CAPN12-211ENST00000601685 PROK1P58294 105 aa12.14□□□□□ -0.47
CAPN12-211ENST00000601685 RNF152Q8N8N0 203 aa12.14□□□□□ -0.47
CAPN12-211ENST00000601685 C10orf105Q8TEF2 133 aa12.13□□□□□ -0.47
CAPN12-211ENST00000601685 PRRC2AP48634 2157 aaKnown RBP12.12□□□□□ -0.47
CAPN12-211ENST00000601685 TIMM17BO60830 172 aa12.12□□□□□ -0.47
CAPN12-211ENST00000601685 CCL19Q99731 98 aa12.12□□□□□ -0.47
CAPN12-211ENST00000601685 TNFRSF18Q9Y5U5 241 aa12.12□□□□□ -0.47
CAPN12-211ENST00000601685 PSMB8P28062 276 aa12.12□□□□□ -0.47
CAPN12-211ENST00000601685 TMEM95Q3KNT9 176 aa12.12□□□□□ -0.47
CAPN12-211ENST00000601685 DUX3Q96PT4 197 aa12.12□□□□□ -0.47
CAPN12-211ENST00000601685 UBE2D4Q9Y2X8 147 aa12.12□□□□□ -0.47
CAPN12-211ENST00000601685 ITPR1Q14643 2758 aa12.11□□□□□ -0.47
CAPN12-211ENST00000601685 CHCHD7Q9BUK0 85 aa12.11□□□□□ -0.47
CAPN12-211ENST00000601685 SPANXA1Q9NS26 97 aa12.11□□□□□ -0.47
CAPN12-211ENST00000601685 CSPG4Q6UVK1 2322 aa12.11□□□□□ -0.47
CAPN12-211ENST00000601685 IGHV4-30-2A0A087WSY4 118 aa12.11□□□□□ -0.47
CAPN12-211ENST00000601685 RBMY1A1P0DJD3 496 aaKnown RBP12.1□□□□□ -0.47
CAPN12-211ENST00000601685 RBMY1CP0DJD4 496 aa12.1□□□□□ -0.47
CAPN12-211ENST00000601685 RBMY1FQ15415 496 aaKnown RBP12.1□□□□□ -0.47
CAPN12-211ENST00000601685 CRYBG3Q68DQ2 2970 aa12.09□□□□□ -0.47
CAPN12-211ENST00000601685 CELSR2Q9HCU4 2923 aa12.09□□□□□ -0.47
CAPN12-211ENST00000601685 MSMBP08118 114 aa12.09□□□□□ -0.47
CAPN12-211ENST00000601685 ATP5J2P56134 94 aa12.09□□□□□ -0.47
CAPN12-211ENST00000601685 AVPP01185 164 aa12.08□□□□□ -0.48
CAPN12-211ENST00000601685 Q9UF83 564 aa12.08□□□□□ -0.48
CAPN12-211ENST00000601685 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.07□□□□□ -0.48
CAPN12-211ENST00000601685 TRBV7-7A0A0K0K1E9 115 aa12.07□□□□□ -0.48
CAPN12-211ENST00000601685 IGKV2-29A2NJV5 120 aaPredicted RBP12.07□□□□□ -0.48
CAPN12-211ENST00000601685 C10orf99Q6UWK7 81 aa12.07□□□□□ -0.48
CAPN12-211ENST00000601685 HTN1P15515 57 aa12.07□□□□□ -0.48
CAPN12-211ENST00000601685 DAND5Q8N907 189 aa12.07□□□□□ -0.48
CAPN12-211ENST00000601685 CITED2Q99967 270 aaPredicted RBP12.07□□□□□ -0.48
CAPN12-211ENST00000601685 CSMD2Q7Z408 3487 aa12.06□□□□□ -0.48
CAPN12-211ENST00000601685 KNCNA6PVL3 124 aa12.06□□□□□ -0.48
CAPN12-211ENST00000601685 NDUFA1O15239 70 aa12.06□□□□□ -0.48
CAPN12-211ENST00000601685 Q6ZSN1 163 aa12.06□□□□□ -0.48
CAPN12-211ENST00000601685 LINC00467Q9BRT7 94 aa12.06□□□□□ -0.48
CAPN12-211ENST00000601685 CDKN2A-AS1Q9UH64 79 aa12.06□□□□□ -0.48
CAPN12-211ENST00000601685 SYNJ2BPP57105 145 aa12.05□□□□□ -0.48
CAPN12-211ENST00000601685 PRORYQ9H606 182 aa12.05□□□□□ -0.48
CAPN12-211ENST00000601685 SORL1Q92673 2214 aa12.05□□□□□ -0.48
CAPN12-211ENST00000601685 TIRAPP58753 221 aa12.05□□□□□ -0.48
CAPN12-211ENST00000601685 IGLV5-45A0A087WSX0 123 aa12.04□□□□□ -0.48
CAPN12-211ENST00000601685 TMEM101Q96IK0 257 aa12.04□□□□□ -0.48
CAPN12-211ENST00000601685 MEIG1Q5JSS6 88 aa12.04□□□□□ -0.48
CAPN12-211ENST00000601685 PIK3CD-AS1Q5SR53 167 aa12.04□□□□□ -0.48
CAPN12-211ENST00000601685 TMEM89A2RUT3 159 aa12.03□□□□□ -0.48
CAPN12-211ENST00000601685 CIRBPQ14011 172 aaKnown RBP12.03□□□□□ -0.48
CAPN12-211ENST00000601685 FAM110AQ9BQ89 295 aa12.03□□□□□ -0.48
CAPN12-211ENST00000601685 DOPEY2Q9Y3R5 2298 aa12.03□□□□□ -0.48
CAPN12-211ENST00000601685 LINC00308Q8TCZ7 52 aa12.03□□□□□ -0.48
CAPN12-211ENST00000601685 CHCHD5Q9BSY4 110 aa12.03□□□□□ -0.48
CAPN12-211ENST00000601685 ACYP1P07311 99 aa12.02□□□□□ -0.48
CAPN12-211ENST00000601685 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.02□□□□□ -0.48
CAPN12-211ENST00000601685 IGHV4-59P01825 116 aa12.02□□□□□ -0.49
CAPN12-211ENST00000601685 PRM2P04554 102 aa12.02□□□□□ -0.49
CAPN12-211ENST00000601685 COX7A2LO14548 114 aa12.01□□□□□ -0.49
CAPN12-211ENST00000601685 DNAJC30Q96LL9 226 aa12.01□□□□□ -0.49
CAPN12-211ENST00000601685 DUX5Q96PT3 197 aa12.01□□□□□ -0.49
CAPN12-211ENST00000601685 IGHV3-38A0A0C4DH36 116 aa12.01□□□□□ -0.49
CAPN12-211ENST00000601685 ZNF415Q09FC8 603 aa12.01□□□□□ -0.49
CAPN12-211ENST00000601685 SMIM20Q8N5G0 67 aa12.01□□□□□ -0.49
CAPN12-211ENST00000601685 A8MTW9 85 aa12□□□□□ -0.49
CAPN12-211ENST00000601685 B4DSR2 109 aa12□□□□□ -0.49
CAPN12-211ENST00000601685 COX6A2Q02221 97 aa12□□□□□ -0.49
CAPN12-211ENST00000601685 IMUPQ9GZP8 106 aa12□□□□□ -0.49
CAPN12-211ENST00000601685 CACNA1AO00555 2505 aa12□□□□□ -0.49
CAPN12-211ENST00000601685 IGLV5-39A0A0G2JS06 123 aa11.99□□□□□ -0.49
CAPN12-211ENST00000601685 IGHV3-53P01767 116 aa11.99□□□□□ -0.49
CAPN12-211ENST00000601685 DEFB112Q30KQ8 113 aa11.99□□□□□ -0.49
CAPN12-211ENST00000601685 Q9H8V8 135 aa11.99□□□□□ -0.49
CAPN12-211ENST00000601685 NACAE9PAV3 2078 aa11.99□□□□□ -0.49
CAPN12-211ENST00000601685 RBMY1BA6NDE4 496 aaKnown RBP11.99□□□□□ -0.49
CAPN12-211ENST00000601685 RBMY1EA6NEQ0 496 aaKnown RBP11.99□□□□□ -0.49
CAPN12-211ENST00000601685 RBMY1DP0C7P1 496 aaKnown RBP11.99□□□□□ -0.49
CAPN12-211ENST00000601685 DEFB131AP59861 70 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms