RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 HIST1H2BKO60814 126 aa9.99□□□□□ -0.81
USE1-210ENST00000601662 HIST1H2BJP06899 126 aa9.99□□□□□ -0.81
USE1-210ENST00000601662 HIST1H2BOP23527 126 aa9.99□□□□□ -0.81
USE1-210ENST00000601662 G0S2P27469 103 aa9.99□□□□□ -0.81
USE1-210ENST00000601662 FCER1GP30273 86 aa9.99□□□□□ -0.81
USE1-210ENST00000601662 HIST1H2BBP33778 126 aa9.99□□□□□ -0.81
USE1-210ENST00000601662 IFI27P40305 119 aaPredicted RBP9.99□□□□□ -0.81
USE1-210ENST00000601662 TIRAPP58753 221 aa9.99□□□□□ -0.81
USE1-210ENST00000601662 HIST1H2BDP58876 126 aa9.99□□□□□ -0.81
USE1-210ENST00000601662 HIST1H2BCP62807 126 aa9.99□□□□□ -0.81
USE1-210ENST00000601662 HIST2H2BEQ16778 126 aa9.99□□□□□ -0.81
USE1-210ENST00000601662 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.99□□□□□ -0.81
USE1-210ENST00000601662 FA2HQ7L5A8 372 aa9.99□□□□□ -0.81
USE1-210ENST00000601662 BAGE3Q86Y29 109 aa9.99□□□□□ -0.81
USE1-210ENST00000601662 HIST1H2BHQ93079 126 aa9.99□□□□□ -0.81
USE1-210ENST00000601662 HIST1H2BNQ99877 126 aa9.99□□□□□ -0.81
USE1-210ENST00000601662 HIST1H2BMQ99879 126 aa9.99□□□□□ -0.81
USE1-210ENST00000601662 IGLV2-18A0A075B6J9 118 aa9.98□□□□□ -0.81
USE1-210ENST00000601662 LINC00614P0C842 121 aa9.98□□□□□ -0.81
USE1-210ENST00000601662 NIT1Q86X76 327 aa9.98□□□□□ -0.81
USE1-210ENST00000601662 IGHV3-38A0A0C4DH36 116 aa9.97□□□□□ -0.81
USE1-210ENST00000601662 LINC01546A6NGU7 62 aa9.97□□□□□ -0.81
USE1-210ENST00000601662 M0R2N4 97 aa9.97□□□□□ -0.81
USE1-210ENST00000601662 IQCJQ1A5X6 159 aa9.97□□□□□ -0.81
USE1-210ENST00000601662 ORMDL2Q53FV1 153 aa9.97□□□□□ -0.81
USE1-210ENST00000601662 LYPD5Q6UWN5 251 aa9.97□□□□□ -0.81
USE1-210ENST00000601662 CHCHD1Q96BP2 118 aaKnown RBP9.97□□□□□ -0.81
USE1-210ENST00000601662 TRBV6-8A0A0A6YYG3 113 aa9.96□□□□□ -0.82
USE1-210ENST00000601662 IGHV1-24A0A0C4DH33 117 aa9.96□□□□□ -0.82
USE1-210ENST00000601662 TSHBP01222 138 aa9.96□□□□□ -0.82
USE1-210ENST00000601662 CCL18P55774 89 aa9.96□□□□□ -0.82
USE1-210ENST00000601662 LAGE3Q14657 143 aa9.96□□□□□ -0.82
USE1-210ENST00000601662 AP5S1Q9NUS5 200 aa9.96□□□□□ -0.82
USE1-210ENST00000601662 DNAH6Q9C0G6 4158 aa9.96□□□□□ -0.82
USE1-210ENST00000601662 TRBV25-1A0A075B6N4 114 aa9.95□□□□□ -0.82
USE1-210ENST00000601662 LELP1Q5T871 98 aa9.95□□□□□ -0.82
USE1-210ENST00000601662 TMEM18Q96B42 140 aa9.95□□□□□ -0.82
USE1-210ENST00000601662 TRAV8-6A0A0B4J262 113 aa9.94□□□□□ -0.82
USE1-210ENST00000601662 LINC01549A6NIU2 74 aa9.94□□□□□ -0.82
USE1-210ENST00000601662 H7C423 109 aa9.94□□□□□ -0.82
USE1-210ENST00000601662 AMTP48728 403 aa9.94□□□□□ -0.82
USE1-210ENST00000601662 NDUFA6P56556 154 aa9.94□□□□□ -0.82
USE1-210ENST00000601662 SMAGPQ0VAQ4 97 aa9.94□□□□□ -0.82
USE1-210ENST00000601662 ESRGQ1W209 222 aa9.94□□□□□ -0.82
USE1-210ENST00000601662 RNASEKQ6P5S7 137 aaKnown RBP9.94□□□□□ -0.82
USE1-210ENST00000601662 NTM-AS1Q6ZSK4 140 aa9.94□□□□□ -0.82
USE1-210ENST00000601662 TMEM243Q9BU79 118 aa9.94□□□□□ -0.82
USE1-210ENST00000601662 DNAH10Q8IVF4 4471 aa9.94□□□□□ -0.82
USE1-210ENST00000601662 EPPK1P58107 5090 aaKnown RBP9.93□□□□□ -0.82
USE1-210ENST00000601662 PKIAP61925 76 aa9.93□□□□□ -0.82
USE1-210ENST00000601662 COA6Q5JTJ3 125 aaKnown RBP9.93□□□□□ -0.82
USE1-210ENST00000601662 HSBP1O75506 76 aa9.92□□□□□ -0.82
USE1-210ENST00000601662 S100A6P06703 90 aa9.92□□□□□ -0.82
USE1-210ENST00000601662 ESDP10768 282 aa9.92□□□□□ -0.82
USE1-210ENST00000601662 URB1-AS1Q96HZ7 61 aa9.92□□□□□ -0.82
USE1-210ENST00000601662 UBE2L6O14933 153 aa9.91□□□□□ -0.82
USE1-210ENST00000601662 SERF1AO75920 110 aa9.91□□□□□ -0.82
USE1-210ENST00000601662 DEFB104AQ8WTQ1 72 aa9.91□□□□□ -0.82
USE1-210ENST00000601662 CHCHD5Q9BSY4 110 aa9.91□□□□□ -0.82
USE1-210ENST00000601662 CHCHD7Q9BUK0 85 aa9.91□□□□□ -0.82
USE1-210ENST00000601662 LINC00588Q9Y4M8 146 aa9.91□□□□□ -0.82
USE1-210ENST00000601662 C20orf203Q8NBC4 194 aa9.9□□□□□ -0.82
USE1-210ENST00000601662 CYSLTR1Q9Y271 337 aa9.9□□□□□ -0.82
USE1-210ENST00000601662 MRPS16Q9Y3D3 137 aaKnown RBP9.9□□□□□ -0.82
USE1-210ENST00000601662 BTF3P20290 206 aaKnown RBP9.89□□□□□ -0.83
USE1-210ENST00000601662 TMEM262E9PQX1 116 aa9.88□□□□□ -0.83
USE1-210ENST00000601662 HBDP02042 147 aa9.88□□□□□ -0.83
USE1-210ENST00000601662 C2orf66Q6UXQ4 117 aa9.88□□□□□ -0.83
USE1-210ENST00000601662 TOMM6Q96B49 74 aa9.88□□□□□ -0.83
USE1-210ENST00000601662 UPK3BQ9BT76 320 aa9.88□□□□□ -0.83
USE1-210ENST00000601662 TIMM21Q9BVV7 248 aa9.88□□□□□ -0.83
USE1-210ENST00000601662 ZNF25P17030 456 aaPredicted RBP9.87□□□□□ -0.83
USE1-210ENST00000601662 AMMECR1LQ6DCA0 310 aa9.87□□□□□ -0.83
USE1-210ENST00000601662 SPANXA1Q9NS26 97 aa9.87□□□□□ -0.83
USE1-210ENST00000601662 CSDC2Q9Y534 153 aaKnown RBP9.87□□□□□ -0.83
USE1-210ENST00000601662 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.86□□□□□ -0.83
USE1-210ENST00000601662 A0A087WX48 190 aa9.86□□□□□ -0.83
USE1-210ENST00000601662 A0A1B0GUV1 79 aa9.86□□□□□ -0.83
USE1-210ENST00000601662 IGKV2-29A2NJV5 120 aaPredicted RBP9.86□□□□□ -0.83
USE1-210ENST00000601662 NUPR1O60356 82 aa9.86□□□□□ -0.83
USE1-210ENST00000601662 NPSP0C0P6 89 aa9.86□□□□□ -0.83
USE1-210ENST00000601662 LINC00310P59036 64 aa9.86□□□□□ -0.83
USE1-210ENST00000601662 GAGE6Q13070 117 aa9.86□□□□□ -0.83
USE1-210ENST00000601662 DGAT2L7PQ6IED9 249 aa9.86□□□□□ -0.83
USE1-210ENST00000601662 MRPL52Q86TS9 123 aaKnown RBP9.86□□□□□ -0.83
USE1-210ENST00000601662 TMEM101Q96IK0 257 aa9.86□□□□□ -0.83
USE1-210ENST00000601662 Q9H8V8 135 aa9.86□□□□□ -0.83
USE1-210ENST00000601662 PYGO1Q9Y3Y4 419 aa9.86□□□□□ -0.83
USE1-210ENST00000601662 FGF6P10767 208 aa9.85□□□□□ -0.83
USE1-210ENST00000601662 Q6ZR54 194 aa9.85□□□□□ -0.83
USE1-210ENST00000601662 ERASQ7Z444 233 aa9.85□□□□□ -0.83
USE1-210ENST00000601662 FAM19A2Q8N3H0 131 aa9.85□□□□□ -0.83
USE1-210ENST00000601662 SCGB3A1Q96QR1 104 aa9.85□□□□□ -0.83
USE1-210ENST00000601662 FRAS1Q86XX4 4008 aa9.85□□□□□ -0.83
USE1-210ENST00000601662 K7EP13 123 aa9.84□□□□□ -0.83
USE1-210ENST00000601662 SIVA1O15304 175 aa9.84□□□□□ -0.83
USE1-210ENST00000601662 ATP5LO75964 103 aa9.84□□□□□ -0.83
USE1-210ENST00000601662 RPL39P62891 51 aaKnown RBP9.84□□□□□ -0.83
USE1-210ENST00000601662 PMCHL1Q16048 86 aa9.84□□□□□ -0.83
USE1-210ENST00000601662 PAPPA-AS1Q5QFB9 102 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms