RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 NAT8Q9UHE5 227 aa11.34□□□□□ -0.59
HERC3-214ENST00000601319 ABCA13Q86UQ4 5058 aa11.34□□□□□ -0.59
HERC3-214ENST00000601319 SRSF3P84103 164 aaKnown RBP11.33□□□□□ -0.6
HERC3-214ENST00000601319 GAGE6Q13070 117 aa11.33□□□□□ -0.6
HERC3-214ENST00000601319 COTL1Q14019 142 aa11.33□□□□□ -0.6
HERC3-214ENST00000601319 BAALCQ8WXS3 180 aa11.33□□□□□ -0.6
HERC3-214ENST00000601319 KRTAP4-5Q9BYR2 181 aa11.33□□□□□ -0.6
HERC3-214ENST00000601319 A0A1B0GUV1 79 aa11.32□□□□□ -0.6
HERC3-214ENST00000601319 LECT2O14960 151 aa11.32□□□□□ -0.6
HERC3-214ENST00000601319 XGP55808 180 aa11.32□□□□□ -0.6
HERC3-214ENST00000601319 TMEM191AQ9H0A3 160 aa11.32□□□□□ -0.6
HERC3-214ENST00000601319 NCR2O95944 276 aa11.31□□□□□ -0.6
HERC3-214ENST00000601319 AMTP48728 403 aa11.31□□□□□ -0.6
HERC3-214ENST00000601319 ADIRFQ15847 76 aa11.31□□□□□ -0.6
HERC3-214ENST00000601319 RPL39LQ96EH5 51 aaKnown RBP11.31□□□□□ -0.6
HERC3-214ENST00000601319 TRBV6-5A0A0K0K1A5 114 aa11.3□□□□□ -0.6
HERC3-214ENST00000601319 LINC00269Q8N2A0 174 aa11.3□□□□□ -0.6
HERC3-214ENST00000601319 C14orf177Q52M58 125 aa11.29□□□□□ -0.6
HERC3-214ENST00000601319 C20orf203Q8NBC4 194 aa11.29□□□□□ -0.6
HERC3-214ENST00000601319 NUP35Q8NFH5 326 aa11.29□□□□□ -0.6
HERC3-214ENST00000601319 NAT8BQ9UHF3 227 aa11.29□□□□□ -0.6
HERC3-214ENST00000601319 SDHAF1A6NFY7 115 aa11.28□□□□□ -0.6
HERC3-214ENST00000601319 UBE2L6O14933 153 aa11.28□□□□□ -0.6
HERC3-214ENST00000601319 REG3AQ06141 175 aa11.28□□□□□ -0.6
HERC3-214ENST00000601319 RIGQ13278 110 aa11.28□□□□□ -0.6
HERC3-214ENST00000601319 MRAP2Q96G30 205 aa11.28□□□□□ -0.6
HERC3-214ENST00000601319 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.27□□□□□ -0.61
HERC3-214ENST00000601319 SMIM27A0A1W2PRY6 76 aa11.27□□□□□ -0.61
HERC3-214ENST00000601319 KRTAP26-1Q6PEX3 210 aa11.27□□□□□ -0.61
HERC3-214ENST00000601319 CLPSL2Q6UWE3 100 aa11.27□□□□□ -0.61
HERC3-214ENST00000601319 RNF185Q96GF1 192 aa11.27□□□□□ -0.61
HERC3-214ENST00000601319 IGLV4-60A0A075B6I1 120 aa11.26□□□□□ -0.61
HERC3-214ENST00000601319 TRAV8-4A0A0B4J246 113 aa11.26□□□□□ -0.61
HERC3-214ENST00000601319 H7C423 109 aa11.26□□□□□ -0.61
HERC3-214ENST00000601319 HLA-DQA1P01909 254 aa11.26□□□□□ -0.61
HERC3-214ENST00000601319 RAB4AP20338 218 aa11.26□□□□□ -0.61
HERC3-214ENST00000601319 Q6ZSA8 131 aa11.26□□□□□ -0.61
HERC3-214ENST00000601319 I3L3M4 83 aa11.25□□□□□ -0.61
HERC3-214ENST00000601319 APCSP02743 223 aa11.25□□□□□ -0.61
HERC3-214ENST00000601319 AMN1Q8IY45 258 aa11.25□□□□□ -0.61
HERC3-214ENST00000601319 DEFB104AQ8WTQ1 72 aa11.25□□□□□ -0.61
HERC3-214ENST00000601319 A0A1B0GW15 77 aa11.24□□□□□ -0.61
HERC3-214ENST00000601319 USP17L23D6RBM5 183 aa11.24□□□□□ -0.61
HERC3-214ENST00000601319 RAB14P61106 215 aa11.24□□□□□ -0.61
HERC3-214ENST00000601319 ST20Q9HBF5 79 aa11.24□□□□□ -0.61
HERC3-214ENST00000601319 TRBV27A0A0K0K1C4 114 aa11.23□□□□□ -0.61
HERC3-214ENST00000601319 GAS8-AS1O95177 125 aa11.23□□□□□ -0.61
HERC3-214ENST00000601319 PPP1R17O96001 155 aa11.23□□□□□ -0.61
HERC3-214ENST00000601319 RPS10P46783 165 aaKnown RBP11.23□□□□□ -0.61
HERC3-214ENST00000601319 SRRM2Q9UQ35 2752 aaKnown RBP11.23□□□□□ -0.61
HERC3-214ENST00000601319 EPM2AB3EWF7 344 aa11.22□□□□□ -0.61
HERC3-214ENST00000601319 TSHBP01222 138 aa11.22□□□□□ -0.61
HERC3-214ENST00000601319 ZNF25P17030 456 aaPredicted RBP11.22□□□□□ -0.61
HERC3-214ENST00000601319 POLR2KP53803 58 aaKnown RBP11.22□□□□□ -0.61
HERC3-214ENST00000601319 FAM30AQ9NZY2 134 aa11.22□□□□□ -0.61
HERC3-214ENST00000601319 PMCHP20382 165 aa11.21□□□□□ -0.61
HERC3-214ENST00000601319 DNAH8Q96JB1 4490 aa11.2□□□□□ -0.62
HERC3-214ENST00000601319 IGLV10-54A0A075B6I4 117 aa11.2□□□□□ -0.62
HERC3-214ENST00000601319 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.2□□□□□ -0.62
HERC3-214ENST00000601319 IGKV2-29A2NJV5 120 aaPredicted RBP11.2□□□□□ -0.62
HERC3-214ENST00000601319 FGF6P10767 208 aa11.2□□□□□ -0.62
HERC3-214ENST00000601319 ESDP10768 282 aa11.2□□□□□ -0.62
HERC3-214ENST00000601319 FAM104BQ5XKR9 115 aa11.2□□□□□ -0.62
HERC3-214ENST00000601319 AMMECR1LQ6DCA0 310 aa11.2□□□□□ -0.62
HERC3-214ENST00000601319 NRACQ8N912 160 aa11.2□□□□□ -0.62
HERC3-214ENST00000601319 S100A8P05109 93 aa11.19□□□□□ -0.62
HERC3-214ENST00000601319 PNRC1Q12796 327 aaPredicted RBP11.19□□□□□ -0.62
HERC3-214ENST00000601319 CLLU1Q5K131 121 aa11.19□□□□□ -0.62
HERC3-214ENST00000601319 Q5VSD8 79 aa11.19□□□□□ -0.62
HERC3-214ENST00000601319 TMEM242Q9NWH2 141 aa11.19□□□□□ -0.62
HERC3-214ENST00000601319 A0A1B0GXF2 115 aa11.18□□□□□ -0.62
HERC3-214ENST00000601319 LINC00862A6NCI5 91 aa11.18□□□□□ -0.62
HERC3-214ENST00000601319 PPP1R2P9O14990 202 aa11.18□□□□□ -0.62
HERC3-214ENST00000601319 PRSS1P07477 247 aa11.18□□□□□ -0.62
HERC3-214ENST00000601319 CAMPP49913 170 aa11.18□□□□□ -0.62
HERC3-214ENST00000601319 SUMO2P61956 95 aaKnown RBP11.18□□□□□ -0.62
HERC3-214ENST00000601319 HBBP68871 147 aa11.18□□□□□ -0.62
HERC3-214ENST00000601319 HAMPP81172 84 aa11.18□□□□□ -0.62
HERC3-214ENST00000601319 LINC01620Q4KN68 170 aa11.18□□□□□ -0.62
HERC3-214ENST00000601319 DGAT2L7PQ6IED9 249 aa11.18□□□□□ -0.62
HERC3-214ENST00000601319 CLRN3Q8NCR9 226 aa11.18□□□□□ -0.62
HERC3-214ENST00000601319 FAT1Q14517 4588 aa11.17□□□□□ -0.62
HERC3-214ENST00000601319 VPS13BQ7Z7G8 4022 aa11.17□□□□□ -0.62
HERC3-214ENST00000601319 SMKR1H3BMG3 65 aa11.17□□□□□ -0.62
HERC3-214ENST00000601319 VCYO14598 125 aa11.17□□□□□ -0.62
HERC3-214ENST00000601319 MRPL51Q4U2R6 128 aaKnown RBP11.17□□□□□ -0.62
HERC3-214ENST00000601319 RNASEKQ6P5S7 137 aaKnown RBP11.17□□□□□ -0.62
HERC3-214ENST00000601319 MRPL52Q86TS9 123 aaKnown RBP11.17□□□□□ -0.62
HERC3-214ENST00000601319 TRBV24-1A0A075B6N3 115 aa11.16□□□□□ -0.62
HERC3-214ENST00000601319 F8W036 122 aa11.16□□□□□ -0.62
HERC3-214ENST00000601319 ATP5L2Q7Z4Y8 100 aa11.16□□□□□ -0.62
HERC3-214ENST00000601319 BTF3L4Q96K17 158 aa11.16□□□□□ -0.62
HERC3-214ENST00000601319 C7orf77A4D0Y5 90 aa11.15□□□□□ -0.62
HERC3-214ENST00000601319 RPL32P62910 135 aaKnown RBP11.15□□□□□ -0.62
HERC3-214ENST00000601319 MRPL54Q6P161 138 aaKnown RBP11.15□□□□□ -0.62
HERC3-214ENST00000601319 TMEM101Q96IK0 257 aa11.15□□□□□ -0.62
HERC3-214ENST00000601319 C20orf78Q9BR46 151 aa11.15□□□□□ -0.62
HERC3-214ENST00000601319 FAM229AH3BQW9 127 aa11.14□□□□□ -0.63
HERC3-214ENST00000601319 SMR3BP02814 79 aaPredicted RBP11.14□□□□□ -0.63
HERC3-214ENST00000601319 CNBPP62633 177 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms