RNA–Protein interactions for RNA: ENST00000601252.1

TIMM50-215, Transcript of translocase of inner mitochondrial membrane 50, human

TSL 5

Gene TIMM50, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TIMM50-215	ENST00000601252		A0A1B0GWB2	263 aa		10.41	□□□□□ -0.74
TIMM50-215	ENST00000601252	TSHB	P01222	138 aa		10.41	□□□□□ -0.74
TIMM50-215	ENST00000601252	RBMY1A1	P0DJD3	496 aa	Known RBP	10.41	□□□□□ -0.74
TIMM50-215	ENST00000601252	RBMY1C	P0DJD4	496 aa		10.41	□□□□□ -0.74
TIMM50-215	ENST00000601252	SCGB1A1	P11684	91 aa		10.41	□□□□□ -0.74
TIMM50-215	ENST00000601252	RBMY1F	Q15415	496 aa	Known RBP	10.41	□□□□□ -0.74
TIMM50-215	ENST00000601252	ODF3L2	Q3SX64	289 aa		10.41	□□□□□ -0.74
TIMM50-215	ENST00000601252	DNAJC30	Q96LL9	226 aa		10.41	□□□□□ -0.74
TIMM50-215	ENST00000601252	PYGO1	Q9Y3Y4	419 aa		10.41	□□□□□ -0.74
TIMM50-215	ENST00000601252	CUBN	O60494	3623 aa		10.41	□□□□□ -0.74
TIMM50-215	ENST00000601252	NIPBL	Q6KC79	2804 aa	eCLIP	10.4	□□□□□ -0.74
TIMM50-215	ENST00000601252	MORN3	Q6PF18	240 aa	Predicted RBP	10.4	□□□□□ -0.74
TIMM50-215	ENST00000601252	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.4	□□□□□ -0.74
TIMM50-215	ENST00000601252	TNFRSF18	Q9Y5U5	241 aa		10.4	□□□□□ -0.74
TIMM50-215	ENST00000601252	ADARB2-AS1	A8MUL3	147 aa		10.39	□□□□□ -0.75
TIMM50-215	ENST00000601252	RPL39	P62891	51 aa	Known RBP	10.39	□□□□□ -0.75
TIMM50-215	ENST00000601252	C12orf74	Q32Q52	190 aa		10.39	□□□□□ -0.75
TIMM50-215	ENST00000601252	NDUFA11	Q86Y39	141 aa		10.39	□□□□□ -0.75
TIMM50-215	ENST00000601252	TMEM170B	Q5T4T1	132 aa		10.38	□□□□□ -0.75
TIMM50-215	ENST00000601252	LYRM7	Q5U5X0	104 aa		10.38	□□□□□ -0.75
TIMM50-215	ENST00000601252	STH	Q8IWL8	128 aa		10.38	□□□□□ -0.75
TIMM50-215	ENST00000601252	ZNF479	Q96JC4	524 aa		10.38	□□□□□ -0.75
TIMM50-215	ENST00000601252	SPANXB1	Q9NS25	103 aa	Predicted RBP	10.38	□□□□□ -0.75
TIMM50-215	ENST00000601252	SAP30	O75446	220 aa		10.38	□□□□□ -0.75
TIMM50-215	ENST00000601252	SRSF9	Q13242	221 aa	Known RBP eCLIP	10.38	□□□□□ -0.75
TIMM50-215	ENST00000601252	FAM110A	Q9BQ89	295 aa		10.38	□□□□□ -0.75
TIMM50-215	ENST00000601252	VCX2	Q9H322	139 aa		10.38	□□□□□ -0.75
TIMM50-215	ENST00000601252	IGLL5	B9A064	214 aa		10.37	□□□□□ -0.75
TIMM50-215	ENST00000601252	LGALS3	P17931	250 aa	Known RBP	10.37	□□□□□ -0.75
TIMM50-215	ENST00000601252	LINC01587	Q99440	93 aa		10.37	□□□□□ -0.75
TIMM50-215	ENST00000601252	NACA	E9PAV3	2078 aa		10.36	□□□□□ -0.75
TIMM50-215	ENST00000601252	IGLV1-51	P01701	117 aa		10.36	□□□□□ -0.75
TIMM50-215	ENST00000601252	INAFM1	C9JVW0	142 aa		10.36	□□□□□ -0.75
TIMM50-215	ENST00000601252	HTN1	P15515	57 aa		10.36	□□□□□ -0.75
TIMM50-215	ENST00000601252	BEAN1	Q3B7T3	259 aa		10.36	□□□□□ -0.75
TIMM50-215	ENST00000601252	PLEKHB2	Q96CS7	222 aa		10.36	□□□□□ -0.75
TIMM50-215	ENST00000601252	SPANXA1	Q9NS26	97 aa		10.36	□□□□□ -0.75
TIMM50-215	ENST00000601252	LEPROT	O15243	131 aa		10.35	□□□□□ -0.75
TIMM50-215	ENST00000601252		P0DMU3	169 aa		10.35	□□□□□ -0.75
TIMM50-215	ENST00000601252	FAM231A	P0DMU4	169 aa		10.35	□□□□□ -0.75
TIMM50-215	ENST00000601252	FAM231C	P0DMU5	169 aa		10.35	□□□□□ -0.75
TIMM50-215	ENST00000601252	RRN3P1	Q2M238	152 aa		10.35	□□□□□ -0.75
TIMM50-215	ENST00000601252	CFAP161	Q6P656	301 aa		10.35	□□□□□ -0.75
TIMM50-215	ENST00000601252	C2CD3	Q4AC94	2353 aa		10.34	□□□□□ -0.75
TIMM50-215	ENST00000601252		F8W1H4	67 aa		10.34	□□□□□ -0.75
TIMM50-215	ENST00000601252		J3QQQ9	107 aa		10.34	□□□□□ -0.75
TIMM50-215	ENST00000601252		K7ERJ3	54 aa		10.34	□□□□□ -0.75
TIMM50-215	ENST00000601252	IGHV3-53	P01767	116 aa		10.34	□□□□□ -0.75
TIMM50-215	ENST00000601252	FN1	P02751	2386 aa	Known RBP	10.34	□□□□□ -0.75
TIMM50-215	ENST00000601252	IGLV4-3	A0A075B6K6	122 aa		10.33	□□□□□ -0.76
TIMM50-215	ENST00000601252	CFAP126	Q5VTH2	177 aa		10.33	□□□□□ -0.76
TIMM50-215	ENST00000601252	C11orf72	Q8NBR9	251 aa		10.33	□□□□□ -0.76
TIMM50-215	ENST00000601252	NAA38	Q9BRA0	125 aa	Known RBP	10.33	□□□□□ -0.76
TIMM50-215	ENST00000601252		A0A0J9YY99	117 aa		10.33	□□□□□ -0.76
TIMM50-215	ENST00000601252	TMEM223	A0PJW6	202 aa		10.33	□□□□□ -0.76
TIMM50-215	ENST00000601252	RS1	O15537	224 aa		10.33	□□□□□ -0.76
TIMM50-215	ENST00000601252	PF4	P02776	101 aa		10.33	□□□□□ -0.76
TIMM50-215	ENST00000601252	SMAGP	Q0VAQ4	97 aa		10.33	□□□□□ -0.76
TIMM50-215	ENST00000601252	ZNRF2	Q8NHG8	242 aa		10.33	□□□□□ -0.76
TIMM50-215	ENST00000601252	SLC25A29	Q8N8R3	303 aa		10.32	□□□□□ -0.76
TIMM50-215	ENST00000601252	AMELX	Q99217	191 aa		10.32	□□□□□ -0.76
TIMM50-215	ENST00000601252	UBE2D1	P51668	147 aa		10.31	□□□□□ -0.76
TIMM50-215	ENST00000601252	MRPL16	Q9NX20	251 aa	Known RBP	10.31	□□□□□ -0.76
TIMM50-215	ENST00000601252		J3QR89	54 aa		10.3	□□□□□ -0.76
TIMM50-215	ENST00000601252	EMP1	P54849	157 aa		10.3	□□□□□ -0.76
TIMM50-215	ENST00000601252	KRTAP10-3	P60369	221 aa		10.3	□□□□□ -0.76
TIMM50-215	ENST00000601252	MRPS36	P82909	103 aa	Known RBP	10.3	□□□□□ -0.76
TIMM50-215	ENST00000601252	XCL2	Q9UBD3	114 aa		10.3	□□□□□ -0.76
TIMM50-215	ENST00000601252	CRLF1	O75462	422 aa		10.3	□□□□□ -0.76
TIMM50-215	ENST00000601252	ZNF22	P17026	224 aa	Predicted RBP	10.3	□□□□□ -0.76
TIMM50-215	ENST00000601252	LINC00482	Q8N8I6	264 aa		10.3	□□□□□ -0.76
TIMM50-215	ENST00000601252	TIMM21	Q9BVV7	248 aa		10.29	□□□□□ -0.76
TIMM50-215	ENST00000601252	IGHV3-73	A0A0B4J1V6	119 aa		10.28	□□□□□ -0.76
TIMM50-215	ENST00000601252	TRBV10-1	A0A0K0K1A3	114 aa		10.28	□□□□□ -0.76
TIMM50-215	ENST00000601252		A0A1B0GV72	72 aa		10.28	□□□□□ -0.76
TIMM50-215	ENST00000601252	TINCR	A0A1B0GVN0	87 aa		10.28	□□□□□ -0.76
TIMM50-215	ENST00000601252	RPL24	P83731	157 aa	Known RBP	10.28	□□□□□ -0.76
TIMM50-215	ENST00000601252	C1orf158	Q8N1D5	194 aa		10.28	□□□□□ -0.76
TIMM50-215	ENST00000601252	TMEM263	Q8WUH6	116 aa	Known RBP	10.28	□□□□□ -0.76
TIMM50-215	ENST00000601252	C1QTNF4	Q9BXJ3	329 aa		10.28	□□□□□ -0.76
TIMM50-215	ENST00000601252	C19orf73	Q9NVV2	129 aa		10.28	□□□□□ -0.76
TIMM50-215	ENST00000601252	PGPEP1	Q9NXJ5	209 aa		10.28	□□□□□ -0.76
TIMM50-215	ENST00000601252	IGHV3-30	P01768	117 aa		10.27	□□□□□ -0.76
TIMM50-215	ENST00000601252	IGHV3-30-5	P0DP03	117 aa		10.27	□□□□□ -0.76
TIMM50-215	ENST00000601252	IL17D	Q8TAD2	202 aa		10.27	□□□□□ -0.76
TIMM50-215	ENST00000601252	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.27	□□□□□ -0.77
TIMM50-215	ENST00000601252		G3V4G9	280 aa		10.27	□□□□□ -0.77
TIMM50-215	ENST00000601252	UBE2D4	Q9Y2X8	147 aa		10.27	□□□□□ -0.77
TIMM50-215	ENST00000601252	TRBV20-1	A0A075B6N2	111 aa		10.26	□□□□□ -0.77
TIMM50-215	ENST00000601252		A0A0J9YXV3	536 aa		10.26	□□□□□ -0.77
TIMM50-215	ENST00000601252	AZU1	P20160	251 aa		10.26	□□□□□ -0.77
TIMM50-215	ENST00000601252	INSL3	P51460	131 aa		10.26	□□□□□ -0.77
TIMM50-215	ENST00000601252	TSPEAR-AS2	P59090	65 aa		10.26	□□□□□ -0.77
TIMM50-215	ENST00000601252	DEFB104A	Q8WTQ1	72 aa		10.26	□□□□□ -0.77
TIMM50-215	ENST00000601252	CHCHD7	Q9BUK0	85 aa		10.26	□□□□□ -0.77
TIMM50-215	ENST00000601252	PRM2	P04554	102 aa		10.25	□□□□□ -0.77
TIMM50-215	ENST00000601252	RPL36A	P83881	106 aa	Known RBP	10.25	□□□□□ -0.77
TIMM50-215	ENST00000601252	GAGE13	Q4V321	117 aa		10.25	□□□□□ -0.77
TIMM50-215	ENST00000601252	RPL36AL	Q969Q0	106 aa	Known RBP	10.25	□□□□□ -0.77
TIMM50-215	ENST00000601252	OPRPN	Q99935	248 aa	Predicted RBP	10.25	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms