RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 GFRA4Q9GZZ7 299 aa10.89□□□□□ -0.67
SCAF1-204ENST00000601038 CTRLP40313 264 aa10.88□□□□□ -0.67
SCAF1-204ENST00000601038 COTL1Q14019 142 aa10.88□□□□□ -0.67
SCAF1-204ENST00000601038 NUDT10Q8NFP7 164 aa10.88□□□□□ -0.67
SCAF1-204ENST00000601038 NUDT11Q96G61 164 aa10.88□□□□□ -0.67
SCAF1-204ENST00000601038 CNFNQ9BYD5 112 aa10.88□□□□□ -0.67
SCAF1-204ENST00000601038 UBE2L6O14933 153 aa10.87□□□□□ -0.67
SCAF1-204ENST00000601038 HNRNPA3P51991 378 aaKnown RBP10.87□□□□□ -0.67
SCAF1-204ENST00000601038 CIRBPQ14011 172 aaKnown RBP10.87□□□□□ -0.67
SCAF1-204ENST00000601038 AP5S1Q9NUS5 200 aa10.87□□□□□ -0.67
SCAF1-204ENST00000601038 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.86□□□□□ -0.67
SCAF1-204ENST00000601038 TAGLN2P37802 199 aaKnown RBP10.86□□□□□ -0.67
SCAF1-204ENST00000601038 AMTP48728 403 aa10.86□□□□□ -0.67
SCAF1-204ENST00000601038 TWIST1Q15672 202 aa10.86□□□□□ -0.67
SCAF1-204ENST00000601038 IGHV3-64A0A075B6Q5 118 aa10.85□□□□□ -0.67
SCAF1-204ENST00000601038 SLPIP03973 132 aa10.85□□□□□ -0.67
SCAF1-204ENST00000601038 LRP1Q07954 4544 aaKnown RBP10.84□□□□□ -0.67
SCAF1-204ENST00000601038 SLC51BQ86UW2 128 aa10.84□□□□□ -0.67
SCAF1-204ENST00000601038 GATD1Q8NB37 220 aa10.84□□□□□ -0.67
SCAF1-204ENST00000601038 RPP21Q9H633 154 aaKnown RBP10.84□□□□□ -0.67
SCAF1-204ENST00000601038 TCTE3Q8IZS6 198 aa10.83□□□□□ -0.68
SCAF1-204ENST00000601038 OCC1Q8TAD7 63 aa10.83□□□□□ -0.68
SCAF1-204ENST00000601038 DPH3Q96FX2 82 aa10.83□□□□□ -0.68
SCAF1-204ENST00000601038 RNF185Q96GF1 192 aa10.83□□□□□ -0.68
SCAF1-204ENST00000601038 RNASE7Q9H1E1 156 aaKnown RBP10.83□□□□□ -0.68
SCAF1-204ENST00000601038 TRAV26-2A0A0B4J265 109 aa10.82□□□□□ -0.68
SCAF1-204ENST00000601038 K7EN84 100 aa10.82□□□□□ -0.68
SCAF1-204ENST00000601038 CFAP161Q6P656 301 aa10.82□□□□□ -0.68
SCAF1-204ENST00000601038 GAGE12HA6NDE8 117 aa10.81□□□□□ -0.68
SCAF1-204ENST00000601038 NCR2O95944 276 aa10.81□□□□□ -0.68
SCAF1-204ENST00000601038 A0A087WYN8 130 aa10.8□□□□□ -0.68
SCAF1-204ENST00000601038 H7C423 109 aa10.8□□□□□ -0.68
SCAF1-204ENST00000601038 TEX261Q6UWH6 196 aa10.8□□□□□ -0.68
SCAF1-204ENST00000601038 Q6ZRU5 148 aa10.8□□□□□ -0.68
SCAF1-204ENST00000601038 SMIM15Q7Z3B0 74 aa10.8□□□□□ -0.68
SCAF1-204ENST00000601038 C15orf56Q8N910 161 aa10.8□□□□□ -0.68
SCAF1-204ENST00000601038 SPACA4Q8TDM5 124 aa10.8□□□□□ -0.68
SCAF1-204ENST00000601038 GTSF1Q8WW33 167 aa10.8□□□□□ -0.68
SCAF1-204ENST00000601038 IGKV3OR2-268A0A0C4DH90 116 aa10.79□□□□□ -0.68
SCAF1-204ENST00000601038 CHTF8P0CG12 524 aa10.79□□□□□ -0.68
SCAF1-204ENST00000601038 AMMECR1LQ6DCA0 310 aa10.79□□□□□ -0.68
SCAF1-204ENST00000601038 Q6ZNX1 250 aa10.79□□□□□ -0.68
SCAF1-204ENST00000601038 RPL39LQ96EH5 51 aaKnown RBP10.79□□□□□ -0.68
SCAF1-204ENST00000601038 PLA2G2DQ9UNK4 145 aa10.79□□□□□ -0.68
SCAF1-204ENST00000601038 FOXA3P55318 350 aaPredicted RBP10.78□□□□□ -0.68
SCAF1-204ENST00000601038 CHCHD10Q8WYQ3 142 aaPredicted RBP10.78□□□□□ -0.68
SCAF1-204ENST00000601038 TMEM250H0YL14 139 aa10.77□□□□□ -0.69
SCAF1-204ENST00000601038 APCSP02743 223 aa10.77□□□□□ -0.69
SCAF1-204ENST00000601038 RPS10P46783 165 aaKnown RBP10.77□□□□□ -0.69
SCAF1-204ENST00000601038 RNASEKQ6P5S7 137 aaKnown RBP10.77□□□□□ -0.69
SCAF1-204ENST00000601038 PLAC8Q9NZF1 115 aa10.77□□□□□ -0.69
SCAF1-204ENST00000601038 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.76□□□□□ -0.69
SCAF1-204ENST00000601038 IGKV2-29A2NJV5 120 aaPredicted RBP10.76□□□□□ -0.69
SCAF1-204ENST00000601038 SDHAF1A6NFY7 115 aa10.76□□□□□ -0.69
SCAF1-204ENST00000601038 A8MWL6 223 aa10.76□□□□□ -0.69
SCAF1-204ENST00000601038 GATCO43716 136 aaKnown RBP10.76□□□□□ -0.69
SCAF1-204ENST00000601038 FGF6P10767 208 aa10.76□□□□□ -0.69
SCAF1-204ENST00000601038 COX6A2Q02221 97 aa10.76□□□□□ -0.69
SCAF1-204ENST00000601038 FAM231DQ6ZW35 169 aa10.76□□□□□ -0.69
SCAF1-204ENST00000601038 MT1HL1P0DM35 61 aa10.75□□□□□ -0.69
SCAF1-204ENST00000601038 HIGD2BQ4VC39 106 aa10.75□□□□□ -0.69
SCAF1-204ENST00000601038 FAT3Q8TDW7 4589 aa10.75□□□□□ -0.69
SCAF1-204ENST00000601038 GVQW2A0A096LPI5 108 aaPredicted RBP10.74□□□□□ -0.69
SCAF1-204ENST00000601038 TRBV6-5A0A0K0K1A5 114 aa10.74□□□□□ -0.69
SCAF1-204ENST00000601038 I3L3M4 83 aa10.74□□□□□ -0.69
SCAF1-204ENST00000601038 NDUFS6O75380 124 aaKnown RBP10.74□□□□□ -0.69
SCAF1-204ENST00000601038 ZNF25P17030 456 aaPredicted RBP10.74□□□□□ -0.69
SCAF1-204ENST00000601038 BLOC1S1P78537 153 aa10.74□□□□□ -0.69
SCAF1-204ENST00000601038 FAM231BA6NCW3 169 aa10.73□□□□□ -0.69
SCAF1-204ENST00000601038 PMCHP20382 165 aa10.73□□□□□ -0.69
SCAF1-204ENST00000601038 FOXI1Q12951 378 aa10.73□□□□□ -0.69
SCAF1-204ENST00000601038 CT83Q5H943 113 aa10.73□□□□□ -0.69
SCAF1-204ENST00000601038 OR5A1Q8NGJ0 315 aa10.73□□□□□ -0.69
SCAF1-204ENST00000601038 PRSS3P2Q8NHM4 247 aa10.73□□□□□ -0.69
SCAF1-204ENST00000601038 C7orf33Q8WU49 177 aa10.73□□□□□ -0.69
SCAF1-204ENST00000601038 MAJINQ3KP22 176 aa10.72□□□□□ -0.69
SCAF1-204ENST00000601038 LYPD6BQ8NI32 183 aa10.72□□□□□ -0.69
SCAF1-204ENST00000601038 BTF3L4Q96K17 158 aa10.72□□□□□ -0.69
SCAF1-204ENST00000601038 FAM210AQ96ND0 272 aa10.72□□□□□ -0.69
SCAF1-204ENST00000601038 PHOX2AO14813 284 aa10.71□□□□□ -0.69
SCAF1-204ENST00000601038 ESDP10768 282 aa10.71□□□□□ -0.69
SCAF1-204ENST00000601038 ALKAL2Q6UX46 152 aa10.71□□□□□ -0.69
SCAF1-204ENST00000601038 BORCS7Q96B45 105 aa10.71□□□□□ -0.69
SCAF1-204ENST00000601038 TMEM101Q96IK0 257 aa10.71□□□□□ -0.69
SCAF1-204ENST00000601038 ST20Q9HBF5 79 aa10.71□□□□□ -0.69
SCAF1-204ENST00000601038 HMCN2Q8NDA2 5059 aa10.71□□□□□ -0.7
SCAF1-204ENST00000601038 IGKV2-24A0A0C4DH68 120 aa10.7□□□□□ -0.7
SCAF1-204ENST00000601038 PKHD1L1Q86WI1 4243 aa10.7□□□□□ -0.7
SCAF1-204ENST00000601038 LINC00959A0A1B0GUT2 108 aa10.69□□□□□ -0.7
SCAF1-204ENST00000601038 GAS8-AS1O95177 125 aa10.69□□□□□ -0.7
SCAF1-204ENST00000601038 TSHBP01222 138 aa10.69□□□□□ -0.7
SCAF1-204ENST00000601038 XCL1P47992 114 aa10.69□□□□□ -0.7
SCAF1-204ENST00000601038 CEBPGP53567 150 aa10.69□□□□□ -0.7
SCAF1-204ENST00000601038 TMEM191AQ9H0A3 160 aa10.69□□□□□ -0.7
SCAF1-204ENST00000601038 A0A1B0GUT8 65 aa10.68□□□□□ -0.7
SCAF1-204ENST00000601038 CCL25O15444 150 aa10.68□□□□□ -0.7
SCAF1-204ENST00000601038 POLR2KP53803 58 aaKnown RBP10.68□□□□□ -0.7
SCAF1-204ENST00000601038 STPG4Q8N801 248 aa10.68□□□□□ -0.7
SCAF1-204ENST00000601038 TSKUQ8WUA8 353 aa10.68□□□□□ -0.7
SCAF1-204ENST00000601038 MRAP2Q96G30 205 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms