RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-223ENST00000600872 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.28□□□□□ -1.08
FKRP-223ENST00000600872 DEFB104AQ8WTQ1 72 aa8.28□□□□□ -1.08
FKRP-223ENST00000600872 TRAV26-2A0A0B4J265 109 aa8.27□□□□□ -1.09
FKRP-223ENST00000600872 USP17L23D6RBM5 183 aa8.27□□□□□ -1.09
FKRP-223ENST00000600872 NDUFS6O75380 124 aaKnown RBP8.27□□□□□ -1.09
FKRP-223ENST00000600872 CRPP02741 224 aa8.27□□□□□ -1.09
FKRP-223ENST00000600872 PRSS1P07477 247 aa8.27□□□□□ -1.09
FKRP-223ENST00000600872 TWIST1Q15672 202 aa8.26□□□□□ -1.09
FKRP-223ENST00000600872 TMEM243Q9BU79 118 aa8.26□□□□□ -1.09
FKRP-223ENST00000600872 CHAC1Q9BUX1 264 aa8.26□□□□□ -1.09
FKRP-223ENST00000600872 PKHD1L1Q86WI1 4243 aa8.25□□□□□ -1.09
FKRP-223ENST00000600872 GATCO43716 136 aaKnown RBP8.25□□□□□ -1.09
FKRP-223ENST00000600872 GAS8-AS1O95177 125 aa8.25□□□□□ -1.09
FKRP-223ENST00000600872 HLA-DQA1P01909 254 aa8.25□□□□□ -1.09
FKRP-223ENST00000600872 REG3AQ06141 175 aa8.25□□□□□ -1.09
FKRP-223ENST00000600872 CT83Q5H943 113 aa8.25□□□□□ -1.09
FKRP-223ENST00000600872 LINC01551Q86U37 167 aa8.25□□□□□ -1.09
FKRP-223ENST00000600872 LINC00528Q8N1L1 170 aa8.25□□□□□ -1.09
FKRP-223ENST00000600872 CIRBP-AS1Q8TBR5 109 aa8.25□□□□□ -1.09
FKRP-223ENST00000600872 RPL39LQ96EH5 51 aaKnown RBP8.25□□□□□ -1.09
FKRP-223ENST00000600872 FAM210AQ96ND0 272 aa8.25□□□□□ -1.09
FKRP-223ENST00000600872 FAT3Q8TDW7 4589 aa8.25□□□□□ -1.09
FKRP-223ENST00000600872 SRP19P09132 144 aaKnown RBP8.24□□□□□ -1.09
FKRP-223ENST00000600872 C14orf177Q52M58 125 aa8.24□□□□□ -1.09
FKRP-223ENST00000600872 IGLV10-54A0A075B6I4 117 aa8.23□□□□□ -1.09
FKRP-223ENST00000600872 A8MWL6 223 aa8.23□□□□□ -1.09
FKRP-223ENST00000600872 COTL1Q14019 142 aa8.23□□□□□ -1.09
FKRP-223ENST00000600872 C9orf163Q8N9P6 203 aa8.23□□□□□ -1.09
FKRP-223ENST00000600872 FAM231BA6NCW3 169 aa8.22□□□□□ -1.09
FKRP-223ENST00000600872 C9JQL5 133 aa8.22□□□□□ -1.09
FKRP-223ENST00000600872 PANO1I0J062 215 aa8.22□□□□□ -1.09
FKRP-223ENST00000600872 SLPIP03973 132 aa8.22□□□□□ -1.09
FKRP-223ENST00000600872 DGAT2L7PQ6IED9 249 aa8.22□□□□□ -1.09
FKRP-223ENST00000600872 RNF185Q96GF1 192 aa8.22□□□□□ -1.09
FKRP-223ENST00000600872 SMIM7Q9BQ49 75 aa8.22□□□□□ -1.09
FKRP-223ENST00000600872 TRAV8-4A0A0B4J246 113 aa8.21□□□□□ -1.1
FKRP-223ENST00000600872 TRBV6-5A0A0K0K1A5 114 aa8.21□□□□□ -1.1
FKRP-223ENST00000600872 AMTP48728 403 aa8.21□□□□□ -1.1
FKRP-223ENST00000600872 CEBPGP53567 150 aa8.21□□□□□ -1.1
FKRP-223ENST00000600872 SDIM1Q6ZPB5 146 aa8.21□□□□□ -1.1
FKRP-223ENST00000600872 TSKUQ8WUA8 353 aa8.21□□□□□ -1.1
FKRP-223ENST00000600872 EIF5A2Q9GZV4 153 aaKnown RBP8.21□□□□□ -1.1
FKRP-223ENST00000600872 OSTCQ9NRP0 149 aa8.21□□□□□ -1.1
FKRP-223ENST00000600872 V9GYV3 84 aa8.21□□□□□ -1.1
FKRP-223ENST00000600872 SDHAF1A6NFY7 115 aa8.2□□□□□ -1.1
FKRP-223ENST00000600872 HIGD1CA8MV81 97 aa8.2□□□□□ -1.1
FKRP-223ENST00000600872 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.2□□□□□ -1.1
FKRP-223ENST00000600872 ZNF727A8MUV8 499 aa8.19□□□□□ -1.1
FKRP-223ENST00000600872 NCR2O95944 276 aa8.19□□□□□ -1.1
FKRP-223ENST00000600872 PLA2G1BP04054 148 aaKnown RBP8.19□□□□□ -1.1
FKRP-223ENST00000600872 ESDP10768 282 aa8.19□□□□□ -1.1
FKRP-223ENST00000600872 RPS10P46783 165 aaKnown RBP8.19□□□□□ -1.1
FKRP-223ENST00000600872 CNBPP62633 177 aaKnown RBP8.19□□□□□ -1.1
FKRP-223ENST00000600872 CLRN3Q8NCR9 226 aa8.19□□□□□ -1.1
FKRP-223ENST00000600872 TMEM191AQ9H0A3 160 aa8.19□□□□□ -1.1
FKRP-223ENST00000600872 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.18□□□□□ -1.1
FKRP-223ENST00000600872 A0A1B0GUT8 65 aa8.18□□□□□ -1.1
FKRP-223ENST00000600872 IGKV2-29A2NJV5 120 aaPredicted RBP8.18□□□□□ -1.1
FKRP-223ENST00000600872 RAB4AP20338 218 aa8.18□□□□□ -1.1
FKRP-223ENST00000600872 POLR2KP53803 58 aaKnown RBP8.18□□□□□ -1.1
FKRP-223ENST00000600872 SRSF3P84103 164 aaKnown RBP8.18□□□□□ -1.1
FKRP-223ENST00000600872 CIRBPQ14011 172 aaKnown RBP8.18□□□□□ -1.1
FKRP-223ENST00000600872 TEX261Q6UWH6 196 aa8.18□□□□□ -1.1
FKRP-223ENST00000600872 C15orf56Q8N910 161 aa8.18□□□□□ -1.1
FKRP-223ENST00000600872 ISOC2Q96AB3 205 aa8.18□□□□□ -1.1
FKRP-223ENST00000600872 H7C423 109 aa8.17□□□□□ -1.1
FKRP-223ENST00000600872 UBE2L6O14933 153 aa8.17□□□□□ -1.1
FKRP-223ENST00000600872 TSHBP01222 138 aa8.17□□□□□ -1.1
FKRP-223ENST00000600872 RPL23P62829 140 aaKnown RBP8.17□□□□□ -1.1
FKRP-223ENST00000600872 SMIM15Q7Z3B0 74 aa8.17□□□□□ -1.1
FKRP-223ENST00000600872 NUP35Q8NFH5 326 aa8.17□□□□□ -1.1
FKRP-223ENST00000600872 KRTAP29-1A8MX34 341 aaPredicted RBP8.16□□□□□ -1.1
FKRP-223ENST00000600872 FGF6P10767 208 aa8.16□□□□□ -1.1
FKRP-223ENST00000600872 AMN1Q8IY45 258 aa8.16□□□□□ -1.1
FKRP-223ENST00000600872 TRBV27A0A0K0K1C4 114 aa8.15□□□□□ -1.1
FKRP-223ENST00000600872 I3L3M4 83 aa8.15□□□□□ -1.1
FKRP-223ENST00000600872 APCSP02743 223 aa8.15□□□□□ -1.1
FKRP-223ENST00000600872 TMEM241Q24JQ0 296 aa8.15□□□□□ -1.1
FKRP-223ENST00000600872 NRACQ8N912 160 aa8.15□□□□□ -1.1
FKRP-223ENST00000600872 hDV102S1A0JD36 115 aa8.14□□□□□ -1.11
FKRP-223ENST00000600872 GAGE12HA6NDE8 117 aa8.14□□□□□ -1.11
FKRP-223ENST00000600872 HNRNPA3P51991 378 aaKnown RBP8.14□□□□□ -1.11
FKRP-223ENST00000600872 FAM74A3Q4VXF1 159 aa8.14□□□□□ -1.11
FKRP-223ENST00000600872 CHCHD10Q8WYQ3 142 aaPredicted RBP8.14□□□□□ -1.11
FKRP-223ENST00000600872 TMEM242Q9NWH2 141 aa8.14□□□□□ -1.11
FKRP-223ENST00000600872 IGKV3OR2-268A0A0C4DH90 116 aa8.13□□□□□ -1.11
FKRP-223ENST00000600872 SMIM27A0A1W2PRY6 76 aa8.13□□□□□ -1.11
FKRP-223ENST00000600872 SMKR1H3BMG3 65 aa8.13□□□□□ -1.11
FKRP-223ENST00000600872 ZNF25P17030 456 aaPredicted RBP8.13□□□□□ -1.11
FKRP-223ENST00000600872 PMCHP20382 165 aa8.13□□□□□ -1.11
FKRP-223ENST00000600872 FOXI1Q12951 378 aa8.13□□□□□ -1.11
FKRP-223ENST00000600872 OR5A1Q8NGJ0 315 aa8.13□□□□□ -1.11
FKRP-223ENST00000600872 MRAP2Q96G30 205 aa8.13□□□□□ -1.11
FKRP-223ENST00000600872 ST20Q9HBF5 79 aa8.13□□□□□ -1.11
FKRP-223ENST00000600872 AMMECR1LQ6DCA0 310 aa8.12□□□□□ -1.11
FKRP-223ENST00000600872 RNASEKQ6P5S7 137 aaKnown RBP8.12□□□□□ -1.11
FKRP-223ENST00000600872 MRPL52Q86TS9 123 aaKnown RBP8.12□□□□□ -1.11
FKRP-223ENST00000600872 BORCS7Q96B45 105 aa8.12□□□□□ -1.11
FKRP-223ENST00000600872 CDC42SE2Q9NRR3 84 aa8.12□□□□□ -1.11
FKRP-223ENST00000600872 NAT8Q9UHE5 227 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms