RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 RHEBQ15382 184 aa13.23□□□□□ -0.29
SHKBP1-214ENST00000597396 MPV17L2Q567V2 206 aa13.23□□□□□ -0.29
SHKBP1-214ENST00000597396 Q6ZRN7 208 aaPredicted RBP13.23□□□□□ -0.29
SHKBP1-214ENST00000597396 TMEM70Q9BUB7 260 aa13.23□□□□□ -0.29
SHKBP1-214ENST00000597396 KLK12Q9UKR0 248 aa13.23□□□□□ -0.29
SHKBP1-214ENST00000597396 HECTD4Q9Y4D8 3996 aa13.23□□□□□ -0.29
SHKBP1-214ENST00000597396 I3L3M4 83 aa13.22□□□□□ -0.29
SHKBP1-214ENST00000597396 UBE2L6O14933 153 aa13.22□□□□□ -0.29
SHKBP1-214ENST00000597396 APOC3P02656 99 aa13.22□□□□□ -0.29
SHKBP1-214ENST00000597396 S100PP25815 95 aa13.22□□□□□ -0.29
SHKBP1-214ENST00000597396 ATRAIDQ6UW56 229 aa13.22□□□□□ -0.29
SHKBP1-214ENST00000597396 NRACQ8N912 160 aa13.22□□□□□ -0.29
SHKBP1-214ENST00000597396 RPS10P5Q9NQ39 176 aa13.22□□□□□ -0.29
SHKBP1-214ENST00000597396 HERC2O95714 4834 aa13.22□□□□□ -0.29
SHKBP1-214ENST00000597396 TRAV8-3A0A0A6YYJ7 113 aa13.21□□□□□ -0.29
SHKBP1-214ENST00000597396 APCSP02743 223 aa13.21□□□□□ -0.29
SHKBP1-214ENST00000597396 TRAV9-1A0A075B6T8 112 aa13.2□□□□□ -0.3
SHKBP1-214ENST00000597396 D6R8Y8 96 aa13.2□□□□□ -0.3
SHKBP1-214ENST00000597396 PSCAO43653 123 aa13.2□□□□□ -0.3
SHKBP1-214ENST00000597396 ANGP03950 147 aaKnown RBP13.2□□□□□ -0.3
SHKBP1-214ENST00000597396 POLR2KP53803 58 aaKnown RBP13.2□□□□□ -0.3
SHKBP1-214ENST00000597396 SUMO2P61956 95 aaKnown RBP13.2□□□□□ -0.3
SHKBP1-214ENST00000597396 TMEM242Q9NWH2 141 aa13.2□□□□□ -0.3
SHKBP1-214ENST00000597396 A0A1B0GVY2 172 aa13.19□□□□□ -0.3
SHKBP1-214ENST00000597396 PPBPP02775 128 aa13.19□□□□□ -0.3
SHKBP1-214ENST00000597396 RBX1P62877 108 aa13.19□□□□□ -0.3
SHKBP1-214ENST00000597396 Q8N976 141 aa13.19□□□□□ -0.3
SHKBP1-214ENST00000597396 UBE2WQ96B02 151 aa13.19□□□□□ -0.3
SHKBP1-214ENST00000597396 VCYO14598 125 aa13.18□□□□□ -0.3
SHKBP1-214ENST00000597396 SNAPINO95295 136 aa13.18□□□□□ -0.3
SHKBP1-214ENST00000597396 CRPP02741 224 aa13.18□□□□□ -0.3
SHKBP1-214ENST00000597396 SVBPQ8N300 66 aa13.18□□□□□ -0.3
SHKBP1-214ENST00000597396 RMI2Q96E14 147 aa13.18□□□□□ -0.3
SHKBP1-214ENST00000597396 TM2D2Q9BX73 214 aa13.18□□□□□ -0.3
SHKBP1-214ENST00000597396 FAT2Q9NYQ8 4349 aa13.18□□□□□ -0.3
SHKBP1-214ENST00000597396 TRBV27A0A0K0K1C4 114 aa13.17□□□□□ -0.3
SHKBP1-214ENST00000597396 TNFRSF6BO95407 300 aa13.17□□□□□ -0.3
SHKBP1-214ENST00000597396 ORMDL3Q8N138 153 aa13.17□□□□□ -0.3
SHKBP1-214ENST00000597396 TRBV24-1A0A075B6N3 115 aa13.16□□□□□ -0.3
SHKBP1-214ENST00000597396 TSHBP01222 138 aa13.16□□□□□ -0.3
SHKBP1-214ENST00000597396 FCER1GP30273 86 aa13.16□□□□□ -0.3
SHKBP1-214ENST00000597396 Q0VG73 95 aa13.16□□□□□ -0.3
SHKBP1-214ENST00000597396 TMEM136Q6ZRR5 245 aa13.16□□□□□ -0.3
SHKBP1-214ENST00000597396 C20orf78Q9BR46 151 aa13.16□□□□□ -0.3
SHKBP1-214ENST00000597396 EREGO14944 169 aa13.15□□□□□ -0.3
SHKBP1-214ENST00000597396 NPYP01303 97 aa13.15□□□□□ -0.3
SHKBP1-214ENST00000597396 PRELID3AQ96N28 172 aa13.15□□□□□ -0.3
SHKBP1-214ENST00000597396 KIR2DL4Q99706 377 aa13.15□□□□□ -0.3
SHKBP1-214ENST00000597396 IGKV2D-24A0A075B6R9 120 aa13.14□□□□□ -0.31
SHKBP1-214ENST00000597396 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.14□□□□□ -0.31
SHKBP1-214ENST00000597396 A0A1B0GUV1 79 aa13.14□□□□□ -0.31
SHKBP1-214ENST00000597396 IGKV2-29A2NJV5 120 aaPredicted RBP13.14□□□□□ -0.31
SHKBP1-214ENST00000597396 PHOX2AO14813 284 aa13.14□□□□□ -0.31
SHKBP1-214ENST00000597396 AMMECR1LQ6DCA0 310 aa13.14□□□□□ -0.31
SHKBP1-214ENST00000597396 H7C423 109 aa13.13□□□□□ -0.31
SHKBP1-214ENST00000597396 RNASEKQ6P5S7 137 aaKnown RBP13.13□□□□□ -0.31
SHKBP1-214ENST00000597396 CLPSL2Q6UWE3 100 aa13.13□□□□□ -0.31
SHKBP1-214ENST00000597396 SLC7A5P1Q8MH63 180 aa13.13□□□□□ -0.31
SHKBP1-214ENST00000597396 SMIM2Q9BVW6 85 aa13.13□□□□□ -0.31
SHKBP1-214ENST00000597396 COX11Q9Y6N1 276 aa13.13□□□□□ -0.31
SHKBP1-214ENST00000597396 IGLV4-60A0A075B6I1 120 aa13.12□□□□□ -0.31
SHKBP1-214ENST00000597396 RPL32P62910 135 aaKnown RBP13.12□□□□□ -0.31
SHKBP1-214ENST00000597396 ENHOQ6UWT2 76 aa13.12□□□□□ -0.31
SHKBP1-214ENST00000597396 LINC00269Q8N2A0 174 aa13.12□□□□□ -0.31
SHKBP1-214ENST00000597396 C20orf203Q8NBC4 194 aa13.12□□□□□ -0.31
SHKBP1-214ENST00000597396 A0A087WTM6 91 aa13.11□□□□□ -0.31
SHKBP1-214ENST00000597396 HLA-DQA1P01909 254 aa13.11□□□□□ -0.31
SHKBP1-214ENST00000597396 FGF6P10767 208 aa13.11□□□□□ -0.31
SHKBP1-214ENST00000597396 ESDP10768 282 aa13.11□□□□□ -0.31
SHKBP1-214ENST00000597396 MIAQ16674 131 aa13.11□□□□□ -0.31
SHKBP1-214ENST00000597396 C1orf43Q9BWL3 253 aa13.11□□□□□ -0.31
SHKBP1-214ENST00000597396 LAMTOR2Q9Y2Q5 125 aa13.11□□□□□ -0.31
SHKBP1-214ENST00000597396 TCAPO15273 167 aa13.1□□□□□ -0.31
SHKBP1-214ENST00000597396 COX19Q49B96 90 aa13.1□□□□□ -0.31
SHKBP1-214ENST00000597396 KIAA1109Q2LD37 5005 aa13.1□□□□□ -0.31
SHKBP1-214ENST00000597396 REG3AQ06141 175 aa13.09□□□□□ -0.31
SHKBP1-214ENST00000597396 SPATA12Q7Z6I5 190 aa13.09□□□□□ -0.31
SHKBP1-214ENST00000597396 MAP1LC3AQ9H492 121 aa13.09□□□□□ -0.31
SHKBP1-214ENST00000597396 PRR34Q9NV39 138 aa13.09□□□□□ -0.31
SHKBP1-214ENST00000597396 ZNF25P17030 456 aaPredicted RBP13.08□□□□□ -0.32
SHKBP1-214ENST00000597396 TMEM101Q96IK0 257 aa13.08□□□□□ -0.32
SHKBP1-214ENST00000597396 GNB1LQ9BYB4 327 aa13.08□□□□□ -0.32
SHKBP1-214ENST00000597396 PKD1P98161 4303 aa13.07□□□□□ -0.32
SHKBP1-214ENST00000597396 LOC389332A0A1B0GUA5 103 aa13.07□□□□□ -0.32
SHKBP1-214ENST00000597396 LRCOL1A6NCL2 159 aa13.06□□□□□ -0.32
SHKBP1-214ENST00000597396 SMAGPQ0VAQ4 97 aa13.06□□□□□ -0.32
SHKBP1-214ENST00000597396 KIAA1644Q3SXP7 199 aa13.06□□□□□ -0.32
SHKBP1-214ENST00000597396 OR5A1Q8NGJ0 315 aa13.06□□□□□ -0.32
SHKBP1-214ENST00000597396 TMEM18Q96B42 140 aa13.06□□□□□ -0.32
SHKBP1-214ENST00000597396 TGIF2-C20orf24A0A0A6YYL0 155 aa13.05□□□□□ -0.32
SHKBP1-214ENST00000597396 IGKV3OR2-268A0A0C4DH90 116 aa13.05□□□□□ -0.32
SHKBP1-214ENST00000597396 MT-ND6P03923 174 aa13.05□□□□□ -0.32
SHKBP1-214ENST00000597396 RAB5AP20339 215 aa13.05□□□□□ -0.32
SHKBP1-214ENST00000597396 DGAT2L7PQ6IED9 249 aa13.05□□□□□ -0.32
SHKBP1-214ENST00000597396 IGLV10-54A0A075B6I4 117 aa13.04□□□□□ -0.32
SHKBP1-214ENST00000597396 C16orf90A8MZG2 172 aa13.04□□□□□ -0.32
SHKBP1-214ENST00000597396 KRTAP10-2P60368 255 aa13.04□□□□□ -0.32
SHKBP1-214ENST00000597396 MRPL52Q86TS9 123 aaKnown RBP13.04□□□□□ -0.32
SHKBP1-214ENST00000597396 MAPKAPK5-AS1Q8N8E1 139 aa13.04□□□□□ -0.32
SHKBP1-214ENST00000597396 BAALCQ8WXS3 180 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms