RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 NUDT3O95989 172 aa8.38□□□□□ -1.07
SHKBP1-213ENST00000597325 UBE2D3P61077 147 aa8.38□□□□□ -1.07
SHKBP1-213ENST00000597325 UBE2D2P62837 147 aa8.38□□□□□ -1.07
SHKBP1-213ENST00000597325 DAZ4Q86SG3 579 aaKnown RBP8.38□□□□□ -1.07
SHKBP1-213ENST00000597325 TMEM70Q9BUB7 260 aa8.38□□□□□ -1.07
SHKBP1-213ENST00000597325 SMIM2Q9BVW6 85 aa8.38□□□□□ -1.07
SHKBP1-213ENST00000597325 NXT2Q9NPJ8 142 aaKnown RBP8.38□□□□□ -1.07
SHKBP1-213ENST00000597325 DAZ3Q9NR90 486 aaKnown RBP8.38□□□□□ -1.07
SHKBP1-213ENST00000597325 I3L3M4 83 aa8.37□□□□□ -1.07
SHKBP1-213ENST00000597325 VCYO14598 125 aa8.37□□□□□ -1.07
SHKBP1-213ENST00000597325 LINC00694P0DN24 101 aa8.37□□□□□ -1.07
SHKBP1-213ENST00000597325 RPL32P62910 135 aaKnown RBP8.37□□□□□ -1.07
SHKBP1-213ENST00000597325 ATP6V0E2Q8NHE4 81 aa8.37□□□□□ -1.07
SHKBP1-213ENST00000597325 PRSS3P2Q8NHM4 247 aa8.37□□□□□ -1.07
SHKBP1-213ENST00000597325 C18orf32Q8TCD1 76 aa8.37□□□□□ -1.07
SHKBP1-213ENST00000597325 KIR2DL4Q99706 377 aa8.37□□□□□ -1.07
SHKBP1-213ENST00000597325 Q9UF83 564 aa8.37□□□□□ -1.07
SHKBP1-213ENST00000597325 VPS13BQ7Z7G8 4022 aa8.36□□□□□ -1.07
SHKBP1-213ENST00000597325 A0A096LPF7 62 aa8.36□□□□□ -1.07
SHKBP1-213ENST00000597325 IGHV3-38A0A0C4DH36 116 aa8.36□□□□□ -1.07
SHKBP1-213ENST00000597325 PRSS29PA6NIE9 313 aa8.36□□□□□ -1.07
SHKBP1-213ENST00000597325 TCAPO15273 167 aa8.36□□□□□ -1.07
SHKBP1-213ENST00000597325 CDK2AP2O75956 126 aa8.36□□□□□ -1.07
SHKBP1-213ENST00000597325 FCER1GP30273 86 aa8.36□□□□□ -1.07
SHKBP1-213ENST00000597325 IQCJQ1A5X6 159 aa8.36□□□□□ -1.07
SHKBP1-213ENST00000597325 FA2HQ7L5A8 372 aa8.36□□□□□ -1.07
SHKBP1-213ENST00000597325 NEGR1Q7Z3B1 354 aa8.36□□□□□ -1.07
SHKBP1-213ENST00000597325 BAGE3Q86Y29 109 aa8.36□□□□□ -1.07
SHKBP1-213ENST00000597325 Q8N1X5 172 aa8.36□□□□□ -1.07
SHKBP1-213ENST00000597325 Q8N8P6 123 aa8.36□□□□□ -1.07
SHKBP1-213ENST00000597325 TRBV27A0A0K0K1C4 114 aa8.35□□□□□ -1.07
SHKBP1-213ENST00000597325 PRSS47A8MTI9 375 aa8.35□□□□□ -1.07
SHKBP1-213ENST00000597325 RTL8CO15255 209 aa8.35□□□□□ -1.07
SHKBP1-213ENST00000597325 HIST1H2BKO60814 126 aa8.35□□□□□ -1.07
SHKBP1-213ENST00000597325 HIST1H2BJP06899 126 aa8.35□□□□□ -1.07
SHKBP1-213ENST00000597325 HIST1H2BOP23527 126 aa8.35□□□□□ -1.07
SHKBP1-213ENST00000597325 HIST1H2BBP33778 126 aa8.35□□□□□ -1.07
SHKBP1-213ENST00000597325 IFI27P40305 119 aaPredicted RBP8.35□□□□□ -1.07
SHKBP1-213ENST00000597325 POLR2KP53803 58 aaKnown RBP8.35□□□□□ -1.07
SHKBP1-213ENST00000597325 HIST1H2BDP58876 126 aa8.35□□□□□ -1.07
SHKBP1-213ENST00000597325 HIST1H2BCP62807 126 aa8.35□□□□□ -1.07
SHKBP1-213ENST00000597325 COTL1Q14019 142 aa8.35□□□□□ -1.07
SHKBP1-213ENST00000597325 HIST2H2BEQ16778 126 aa8.35□□□□□ -1.07
SHKBP1-213ENST00000597325 TMEM97Q5BJF2 176 aa8.35□□□□□ -1.07
SHKBP1-213ENST00000597325 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.35□□□□□ -1.07
SHKBP1-213ENST00000597325 RNASEKQ6P5S7 137 aaKnown RBP8.35□□□□□ -1.07
SHKBP1-213ENST00000597325 HIST1H2BHQ93079 126 aa8.35□□□□□ -1.07
SHKBP1-213ENST00000597325 HIST1H2BNQ99877 126 aa8.35□□□□□ -1.07
SHKBP1-213ENST00000597325 HIST1H2BMQ99879 126 aa8.35□□□□□ -1.07
SHKBP1-213ENST00000597325 Q0VG73 95 aa8.34□□□□□ -1.07
SHKBP1-213ENST00000597325 GTSF1LQ9H1H1 148 aa8.34□□□□□ -1.07
SHKBP1-213ENST00000597325 K7EMI3 77 aa8.33□□□□□ -1.08
SHKBP1-213ENST00000597325 AP5S1Q9NUS5 200 aa8.33□□□□□ -1.08
SHKBP1-213ENST00000597325 IGLV2-18A0A075B6J9 118 aa8.32□□□□□ -1.08
SHKBP1-213ENST00000597325 TRBV25-1A0A075B6N4 114 aa8.32□□□□□ -1.08
SHKBP1-213ENST00000597325 TSHBP01222 138 aa8.32□□□□□ -1.08
SHKBP1-213ENST00000597325 LINC00614P0C842 121 aa8.32□□□□□ -1.08
SHKBP1-213ENST00000597325 AMTP48728 403 aa8.32□□□□□ -1.08
SHKBP1-213ENST00000597325 TCTAP57738 103 aa8.32□□□□□ -1.08
SHKBP1-213ENST00000597325 ORMDL2Q53FV1 153 aa8.32□□□□□ -1.08
SHKBP1-213ENST00000597325 DEFB104AQ8WTQ1 72 aa8.32□□□□□ -1.08
SHKBP1-213ENST00000597325 CHCHD1Q96BP2 118 aaKnown RBP8.32□□□□□ -1.08
SHKBP1-213ENST00000597325 FAT1Q14517 4588 aa8.32□□□□□ -1.08
SHKBP1-213ENST00000597325 HMCN2Q8NDA2 5059 aa8.31□□□□□ -1.08
SHKBP1-213ENST00000597325 IGHV1-24A0A0C4DH33 117 aa8.31□□□□□ -1.08
SHKBP1-213ENST00000597325 HSBP1O75506 76 aa8.31□□□□□ -1.08
SHKBP1-213ENST00000597325 SERF1AO75920 110 aa8.31□□□□□ -1.08
SHKBP1-213ENST00000597325 S100A6P06703 90 aa8.31□□□□□ -1.08
SHKBP1-213ENST00000597325 NDUFA6P56556 154 aa8.31□□□□□ -1.08
SHKBP1-213ENST00000597325 LAGE3Q14657 143 aa8.31□□□□□ -1.08
SHKBP1-213ENST00000597325 NIT1Q86X76 327 aa8.31□□□□□ -1.08
SHKBP1-213ENST00000597325 TMA7Q9Y2S6 64 aaKnown RBP8.31□□□□□ -1.08
SHKBP1-213ENST00000597325 TRBV6-8A0A0A6YYG3 113 aa8.3□□□□□ -1.08
SHKBP1-213ENST00000597325 UBE2L6O14933 153 aa8.3□□□□□ -1.08
SHKBP1-213ENST00000597325 G0S2P27469 103 aa8.3□□□□□ -1.08
SHKBP1-213ENST00000597325 CCL18P55774 89 aa8.3□□□□□ -1.08
SHKBP1-213ENST00000597325 TIRAPP58753 221 aa8.3□□□□□ -1.08
SHKBP1-213ENST00000597325 TMEM18Q96B42 140 aa8.3□□□□□ -1.08
SHKBP1-213ENST00000597325 TMEM243Q9BU79 118 aa8.3□□□□□ -1.08
SHKBP1-213ENST00000597325 TRAV8-6A0A0B4J262 113 aa8.29□□□□□ -1.08
SHKBP1-213ENST00000597325 LINC01546A6NGU7 62 aa8.29□□□□□ -1.08
SHKBP1-213ENST00000597325 BTF3P20290 206 aaKnown RBP8.29□□□□□ -1.08
SHKBP1-213ENST00000597325 LELP1Q5T871 98 aa8.29□□□□□ -1.08
SHKBP1-213ENST00000597325 LYPD5Q6UWN5 251 aa8.29□□□□□ -1.08
SHKBP1-213ENST00000597325 CHCHD5Q9BSY4 110 aa8.29□□□□□ -1.08
SHKBP1-213ENST00000597325 APLNQ9ULZ1 77 aa8.29□□□□□ -1.08
SHKBP1-213ENST00000597325 PKIAP61925 76 aa8.28□□□□□ -1.08
SHKBP1-213ENST00000597325 SMAGPQ0VAQ4 97 aa8.28□□□□□ -1.08
SHKBP1-213ENST00000597325 NTM-AS1Q6ZSK4 140 aa8.28□□□□□ -1.08
SHKBP1-213ENST00000597325 UBE2DNLQ8IWF7 75 aa8.28□□□□□ -1.08
SHKBP1-213ENST00000597325 URB1-AS1Q96HZ7 61 aa8.28□□□□□ -1.08
SHKBP1-213ENST00000597325 HBDP02042 147 aa8.27□□□□□ -1.09
SHKBP1-213ENST00000597325 ESRGQ1W209 222 aa8.27□□□□□ -1.09
SHKBP1-213ENST00000597325 COA6Q5JTJ3 125 aaKnown RBP8.27□□□□□ -1.09
SHKBP1-213ENST00000597325 CHCHD7Q9BUK0 85 aa8.27□□□□□ -1.09
SHKBP1-213ENST00000597325 CYSLTR1Q9Y271 337 aa8.27□□□□□ -1.09
SHKBP1-213ENST00000597325 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.26□□□□□ -1.09
SHKBP1-213ENST00000597325 IGKV2-29A2NJV5 120 aaPredicted RBP8.26□□□□□ -1.09
SHKBP1-213ENST00000597325 LINC01549A6NIU2 74 aa8.26□□□□□ -1.09
SHKBP1-213ENST00000597325 H7C423 109 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms