RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 NPYP01303 97 aa9.75□□□□□ -0.85
VRK3-213ENST00000597215 IGHV3-30P01768 117 aa9.75□□□□□ -0.85
VRK3-213ENST00000597215 IGHV3-33P01772 117 aa9.75□□□□□ -0.85
VRK3-213ENST00000597215 APCSP02743 223 aa9.75□□□□□ -0.85
VRK3-213ENST00000597215 MT-ND6P03923 174 aa9.75□□□□□ -0.85
VRK3-213ENST00000597215 IGHV3-30-3P0DP02 117 aa9.75□□□□□ -0.85
VRK3-213ENST00000597215 IGHV3-30-5P0DP03 117 aa9.75□□□□□ -0.85
VRK3-213ENST00000597215 AMTP48728 403 aa9.75□□□□□ -0.85
VRK3-213ENST00000597215 DEFB104AQ8WTQ1 72 aa9.75□□□□□ -0.85
VRK3-213ENST00000597215 TMEM243Q9BU79 118 aa9.75□□□□□ -0.85
VRK3-213ENST00000597215 KRTAP1-5Q9BYS1 174 aa9.75□□□□□ -0.85
VRK3-213ENST00000597215 SMCO4Q9NRQ5 59 aa9.75□□□□□ -0.85
VRK3-213ENST00000597215 LAMTOR2Q9Y2Q5 125 aa9.75□□□□□ -0.85
VRK3-213ENST00000597215 A0A087WX48 190 aa9.74□□□□□ -0.85
VRK3-213ENST00000597215 TMEM262E9PQX1 116 aa9.74□□□□□ -0.85
VRK3-213ENST00000597215 RPL32P62910 135 aaKnown RBP9.74□□□□□ -0.85
VRK3-213ENST00000597215 TSHBP01222 138 aa9.73□□□□□ -0.85
VRK3-213ENST00000597215 BTF3P20290 206 aaKnown RBP9.73□□□□□ -0.85
VRK3-213ENST00000597215 C1orf134Q5TEV5 83 aa9.73□□□□□ -0.85
VRK3-213ENST00000597215 CBLN2Q8IUK8 224 aa9.73□□□□□ -0.85
VRK3-213ENST00000597215 KIR2DL4Q99706 377 aa9.73□□□□□ -0.85
VRK3-213ENST00000597215 UBE2L6O14933 153 aa9.72□□□□□ -0.85
VRK3-213ENST00000597215 FCER1GP30273 86 aa9.72□□□□□ -0.85
VRK3-213ENST00000597215 GAGE6Q13070 117 aa9.72□□□□□ -0.85
VRK3-213ENST00000597215 C6orf223Q8N319 242 aa9.72□□□□□ -0.85
VRK3-213ENST00000597215 Q8N3U1 123 aa9.72□□□□□ -0.85
VRK3-213ENST00000597215 YPEL4Q96NS1 127 aa9.72□□□□□ -0.85
VRK3-213ENST00000597215 SMIM2Q9BVW6 85 aa9.72□□□□□ -0.85
VRK3-213ENST00000597215 TCAPO15273 167 aa9.71□□□□□ -0.86
VRK3-213ENST00000597215 KIAA1644Q3SXP7 199 aa9.71□□□□□ -0.86
VRK3-213ENST00000597215 MPV17L2Q567V2 206 aa9.71□□□□□ -0.86
VRK3-213ENST00000597215 MRPL18Q9H0U6 180 aaKnown RBP9.71□□□□□ -0.86
VRK3-213ENST00000597215 MAP1LC3AQ9H492 121 aa9.71□□□□□ -0.86
VRK3-213ENST00000597215 PRSS47A8MTI9 375 aa9.7□□□□□ -0.86
VRK3-213ENST00000597215 IBA57-AS1B1ANH7 110 aa9.7□□□□□ -0.86
VRK3-213ENST00000597215 FABP9Q0Z7S8 132 aa9.7□□□□□ -0.86
VRK3-213ENST00000597215 LAGE3Q14657 143 aa9.7□□□□□ -0.86
VRK3-213ENST00000597215 TRAPPC1Q9Y5R8 145 aa9.7□□□□□ -0.86
VRK3-213ENST00000597215 H7C423 109 aa9.69□□□□□ -0.86
VRK3-213ENST00000597215 ESDP10768 282 aa9.69□□□□□ -0.86
VRK3-213ENST00000597215 RBX1P62877 108 aa9.69□□□□□ -0.86
VRK3-213ENST00000597215 NFE4Q86UQ8 179 aa9.69□□□□□ -0.86
VRK3-213ENST00000597215 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.68□□□□□ -0.86
VRK3-213ENST00000597215 LOC389332A0A1B0GUA5 103 aa9.68□□□□□ -0.86
VRK3-213ENST00000597215 A0A1B0GUV1 79 aa9.68□□□□□ -0.86
VRK3-213ENST00000597215 IGKV2-29A2NJV5 120 aaPredicted RBP9.68□□□□□ -0.86
VRK3-213ENST00000597215 ANGP03950 147 aaKnown RBP9.68□□□□□ -0.86
VRK3-213ENST00000597215 Q8N976 141 aa9.68□□□□□ -0.86
VRK3-213ENST00000597215 KLK12Q9UKR0 248 aa9.68□□□□□ -0.86
VRK3-213ENST00000597215 EPPK1P58107 5090 aaKnown RBP9.67□□□□□ -0.86
VRK3-213ENST00000597215 RTL8CO15255 209 aa9.67□□□□□ -0.86
VRK3-213ENST00000597215 RAB5AP20339 215 aa9.67□□□□□ -0.86
VRK3-213ENST00000597215 AMMECR1LQ6DCA0 310 aa9.67□□□□□ -0.86
VRK3-213ENST00000597215 Q8N8P6 123 aa9.67□□□□□ -0.86
VRK3-213ENST00000597215 ALKBH7Q9BT30 221 aaPredicted RBP9.67□□□□□ -0.86
VRK3-213ENST00000597215 Q9HAA7 133 aa9.67□□□□□ -0.86
VRK3-213ENST00000597215 DNAH2Q9P225 4427 aa9.66□□□□□ -0.86
VRK3-213ENST00000597215 TRAV8-3A0A0A6YYJ7 113 aa9.66□□□□□ -0.86
VRK3-213ENST00000597215 LINC00336Q6ZUF6 198 aa9.66□□□□□ -0.86
VRK3-213ENST00000597215 TMEM18Q96B42 140 aa9.66□□□□□ -0.86
VRK3-213ENST00000597215 NXT2Q9NPJ8 142 aaKnown RBP9.66□□□□□ -0.86
VRK3-213ENST00000597215 FRAS1Q86XX4 4008 aa9.66□□□□□ -0.86
VRK3-213ENST00000597215 CRPP02741 224 aa9.65□□□□□ -0.86
VRK3-213ENST00000597215 FGF6P10767 208 aa9.65□□□□□ -0.86
VRK3-213ENST00000597215 ZNF25P17030 456 aaPredicted RBP9.65□□□□□ -0.86
VRK3-213ENST00000597215 SMAGPQ0VAQ4 97 aa9.65□□□□□ -0.86
VRK3-213ENST00000597215 Q0VG73 95 aa9.65□□□□□ -0.86
VRK3-213ENST00000597215 RNASEKQ6P5S7 137 aaKnown RBP9.65□□□□□ -0.86
VRK3-213ENST00000597215 UBE2WQ96B02 151 aa9.65□□□□□ -0.86
VRK3-213ENST00000597215 IGLV4-60A0A075B6I1 120 aa9.64□□□□□ -0.87
VRK3-213ENST00000597215 K7EMI3 77 aa9.64□□□□□ -0.87
VRK3-213ENST00000597215 S100A1P23297 94 aa9.64□□□□□ -0.87
VRK3-213ENST00000597215 Q6ZRN7 208 aaPredicted RBP9.64□□□□□ -0.87
VRK3-213ENST00000597215 MRPL52Q86TS9 123 aaKnown RBP9.64□□□□□ -0.87
VRK3-213ENST00000597215 C20orf203Q8NBC4 194 aa9.64□□□□□ -0.87
VRK3-213ENST00000597215 RMI2Q96E14 147 aa9.64□□□□□ -0.87
VRK3-213ENST00000597215 TMEM101Q96IK0 257 aa9.64□□□□□ -0.87
VRK3-213ENST00000597215 DNAH10Q8IVF4 4471 aa9.64□□□□□ -0.87
VRK3-213ENST00000597215 ATP6V1G1O75348 118 aa9.63□□□□□ -0.87
VRK3-213ENST00000597215 SCO1O75880 301 aa9.63□□□□□ -0.87
VRK3-213ENST00000597215 LINC00269Q8N2A0 174 aa9.63□□□□□ -0.87
VRK3-213ENST00000597215 TM2D2Q9BX73 214 aa9.63□□□□□ -0.87
VRK3-213ENST00000597215 PRR34Q9NV39 138 aa9.63□□□□□ -0.87
VRK3-213ENST00000597215 PRSS29PA6NIE9 313 aa9.62□□□□□ -0.87
VRK3-213ENST00000597215 IFI27P40305 119 aaPredicted RBP9.62□□□□□ -0.87
VRK3-213ENST00000597215 ORMDL2Q53FV1 153 aa9.62□□□□□ -0.87
VRK3-213ENST00000597215 CLPSL2Q6UWE3 100 aa9.62□□□□□ -0.87
VRK3-213ENST00000597215 ENHOQ6UWT2 76 aa9.62□□□□□ -0.87
VRK3-213ENST00000597215 OR5A1Q8NGJ0 315 aa9.62□□□□□ -0.87
VRK3-213ENST00000597215 PRSS3P2Q8NHM4 247 aa9.62□□□□□ -0.87
VRK3-213ENST00000597215 COLCA2A8K830 154 aa9.61□□□□□ -0.87
VRK3-213ENST00000597215 PSCAO43653 123 aa9.61□□□□□ -0.87
VRK3-213ENST00000597215 REG3AQ06141 175 aa9.61□□□□□ -0.87
VRK3-213ENST00000597215 MIAQ16674 131 aa9.61□□□□□ -0.87
VRK3-213ENST00000597215 DGAT2L7PQ6IED9 249 aa9.61□□□□□ -0.87
VRK3-213ENST00000597215 TIMM21Q9BVV7 248 aa9.61□□□□□ -0.87
VRK3-213ENST00000597215 UBE2D4Q9Y2X8 147 aa9.61□□□□□ -0.87
VRK3-213ENST00000597215 COX11Q9Y6N1 276 aa9.61□□□□□ -0.87
VRK3-213ENST00000597215 DNAH17Q9UFH2 4485 aa9.6□□□□□ -0.87
VRK3-213ENST00000597215 BIRC6Q9NR09 4857 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms