RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 RBX1P62877 108 aa12.09□□□□□ -0.47
IRF3-216ENST00000597180 DEFB104AQ8WTQ1 72 aa12.09□□□□□ -0.47
IRF3-216ENST00000597180 IMMP2LQ96T52 175 aa12.09□□□□□ -0.47
IRF3-216ENST00000597180 TMEM70Q9BUB7 260 aa12.09□□□□□ -0.47
IRF3-216ENST00000597180 TM2D2Q9BX73 214 aa12.09□□□□□ -0.47
IRF3-216ENST00000597180 CTDSP1Q9GZU7 261 aa12.09□□□□□ -0.47
IRF3-216ENST00000597180 CARHSP1Q9Y2V2 147 aaKnown RBP12.09□□□□□ -0.47
IRF3-216ENST00000597180 PKHD1P08F94 4074 aa12.09□□□□□ -0.47
IRF3-216ENST00000597180 A0A087WTM6 91 aa12.08□□□□□ -0.48
IRF3-216ENST00000597180 Q8N976 141 aa12.08□□□□□ -0.48
IRF3-216ENST00000597180 BIRC6Q9NR09 4857 aa12.08□□□□□ -0.48
IRF3-216ENST00000597180 TRBV27A0A0K0K1C4 114 aa12.07□□□□□ -0.48
IRF3-216ENST00000597180 A0A1B0GUV1 79 aa12.07□□□□□ -0.48
IRF3-216ENST00000597180 PSCAO43653 123 aa12.07□□□□□ -0.48
IRF3-216ENST00000597180 ANGP03950 147 aaKnown RBP12.07□□□□□ -0.48
IRF3-216ENST00000597180 PMCHP20382 165 aa12.07□□□□□ -0.48
IRF3-216ENST00000597180 Q0VG73 95 aa12.07□□□□□ -0.48
IRF3-216ENST00000597180 UBE2WQ96B02 151 aa12.07□□□□□ -0.48
IRF3-216ENST00000597180 BTF3L4Q96K17 158 aa12.07□□□□□ -0.48
IRF3-216ENST00000597180 DNAH11Q96DT5 4516 aa12.06□□□□□ -0.48
IRF3-216ENST00000597180 EREGO14944 169 aa12.06□□□□□ -0.48
IRF3-216ENST00000597180 APCSP02743 223 aa12.06□□□□□ -0.48
IRF3-216ENST00000597180 ENHOQ6UWT2 76 aa12.06□□□□□ -0.48
IRF3-216ENST00000597180 SPATA12Q7Z6I5 190 aa12.06□□□□□ -0.48
IRF3-216ENST00000597180 RMI2Q96E14 147 aa12.06□□□□□ -0.48
IRF3-216ENST00000597180 COX11Q9Y6N1 276 aa12.06□□□□□ -0.48
IRF3-216ENST00000597180 TRBV24-1A0A075B6N3 115 aa12.05□□□□□ -0.48
IRF3-216ENST00000597180 LRCOL1A6NCL2 159 aa12.05□□□□□ -0.48
IRF3-216ENST00000597180 UBE2L6O14933 153 aa12.05□□□□□ -0.48
IRF3-216ENST00000597180 TSHBP01222 138 aa12.05□□□□□ -0.48
IRF3-216ENST00000597180 CKS2P33552 79 aa12.05□□□□□ -0.48
IRF3-216ENST00000597180 SUMO2P61956 95 aaKnown RBP12.05□□□□□ -0.48
IRF3-216ENST00000597180 PRR34Q9NV39 138 aa12.05□□□□□ -0.48
IRF3-216ENST00000597180 H7C423 109 aa12.04□□□□□ -0.48
IRF3-216ENST00000597180 VCYO14598 125 aa12.04□□□□□ -0.48
IRF3-216ENST00000597180 CRPP02741 224 aa12.04□□□□□ -0.48
IRF3-216ENST00000597180 PPBPP02775 128 aa12.04□□□□□ -0.48
IRF3-216ENST00000597180 KRTAP10-2P60368 255 aa12.04□□□□□ -0.48
IRF3-216ENST00000597180 C20orf203Q8NBC4 194 aa12.04□□□□□ -0.48
IRF3-216ENST00000597180 C20orf78Q9BR46 151 aa12.04□□□□□ -0.48
IRF3-216ENST00000597180 TMEM242Q9NWH2 141 aa12.04□□□□□ -0.48
IRF3-216ENST00000597180 TRAV9-1A0A075B6T8 112 aa12.03□□□□□ -0.48
IRF3-216ENST00000597180 D6R8Y8 96 aa12.03□□□□□ -0.48
IRF3-216ENST00000597180 ESDP10768 282 aa12.03□□□□□ -0.48
IRF3-216ENST00000597180 RPL32P62910 135 aaKnown RBP12.03□□□□□ -0.48
IRF3-216ENST00000597180 MIAQ16674 131 aa12.03□□□□□ -0.48
IRF3-216ENST00000597180 IGLV4-60A0A075B6I1 120 aa12.02□□□□□ -0.49
IRF3-216ENST00000597180 IGKV2D-24A0A075B6R9 120 aa12.02□□□□□ -0.49
IRF3-216ENST00000597180 C7orf77A4D0Y5 90 aa12.02□□□□□ -0.49
IRF3-216ENST00000597180 PHOX2AO14813 284 aa12.02□□□□□ -0.49
IRF3-216ENST00000597180 TNFRSF6BO95407 300 aa12.02□□□□□ -0.49
IRF3-216ENST00000597180 RHEBQ15382 184 aa12.02□□□□□ -0.49
IRF3-216ENST00000597180 LINC00269Q8N2A0 174 aa12.02□□□□□ -0.49
IRF3-216ENST00000597180 MAPKAPK5-AS1Q8N8E1 139 aa12.02□□□□□ -0.49
IRF3-216ENST00000597180 CLRN3Q8NCR9 226 aa12.02□□□□□ -0.49
IRF3-216ENST00000597180 C16orf90A8MZG2 172 aa12.01□□□□□ -0.49
IRF3-216ENST00000597180 C1orf43Q9BWL3 253 aa12.01□□□□□ -0.49
IRF3-216ENST00000597180 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12□□□□□ -0.49
IRF3-216ENST00000597180 IGKV2-29A2NJV5 120 aaPredicted RBP12□□□□□ -0.49
IRF3-216ENST00000597180 NPYP01303 97 aa12□□□□□ -0.49
IRF3-216ENST00000597180 REG3AQ06141 175 aa12□□□□□ -0.49
IRF3-216ENST00000597180 CDPF1Q6NVV7 123 aa12□□□□□ -0.49
IRF3-216ENST00000597180 ORMDL3Q8N138 153 aa12□□□□□ -0.49
IRF3-216ENST00000597180 PGPEP1Q9NXJ5 209 aa12□□□□□ -0.49
IRF3-216ENST00000597180 FGF6P10767 208 aa11.99□□□□□ -0.49
IRF3-216ENST00000597180 CLPSL2Q6UWE3 100 aa11.99□□□□□ -0.49
IRF3-216ENST00000597180 TMEM136Q6ZRR5 245 aa11.99□□□□□ -0.49
IRF3-216ENST00000597180 KIR2DL4Q99706 377 aa11.99□□□□□ -0.49
IRF3-216ENST00000597180 DYNC1H1Q14204 4646 aaKnown RBP11.99□□□□□ -0.49
IRF3-216ENST00000597180 ZNF25P17030 456 aaPredicted RBP11.98□□□□□ -0.49
IRF3-216ENST00000597180 S100PP25815 95 aa11.98□□□□□ -0.49
IRF3-216ENST00000597180 FCER1GP30273 86 aa11.98□□□□□ -0.49
IRF3-216ENST00000597180 AMMECR1LQ6DCA0 310 aa11.98□□□□□ -0.49
IRF3-216ENST00000597180 Q8N814 137 aa11.98□□□□□ -0.49
IRF3-216ENST00000597180 SMIM2Q9BVW6 85 aa11.98□□□□□ -0.49
IRF3-216ENST00000597180 RPS10P5Q9NQ39 176 aa11.98□□□□□ -0.49
IRF3-216ENST00000597180 WFDC2Q14508 124 aa11.97□□□□□ -0.49
IRF3-216ENST00000597180 PRELID3AQ96N28 172 aa11.97□□□□□ -0.49
IRF3-216ENST00000597180 LAMTOR2Q9Y2Q5 125 aa11.97□□□□□ -0.49
IRF3-216ENST00000597180 TRAV8-4A0A0B4J246 113 aa11.96□□□□□ -0.49
IRF3-216ENST00000597180 TCAPO15273 167 aa11.96□□□□□ -0.49
IRF3-216ENST00000597180 APOC3P02656 99 aa11.96□□□□□ -0.49
IRF3-216ENST00000597180 NDUFA5Q16718 116 aa11.96□□□□□ -0.49
IRF3-216ENST00000597180 RNASEKQ6P5S7 137 aaKnown RBP11.96□□□□□ -0.49
IRF3-216ENST00000597180 KRTAP26-1Q6PEX3 210 aa11.96□□□□□ -0.49
IRF3-216ENST00000597180 MRPL52Q86TS9 123 aaKnown RBP11.96□□□□□ -0.49
IRF3-216ENST00000597180 BAALCQ8WXS3 180 aa11.96□□□□□ -0.49
IRF3-216ENST00000597180 PRSS47A8MTI9 375 aa11.95□□□□□ -0.5
IRF3-216ENST00000597180 FUSP35637 526 aaKnown RBP eCLIP11.95□□□□□ -0.5
IRF3-216ENST00000597180 SVBPQ8N300 66 aa11.95□□□□□ -0.5
IRF3-216ENST00000597180 NTN5Q8WTR8 489 aaPredicted RBP11.95□□□□□ -0.5
IRF3-216ENST00000597180 SNAPINO95295 136 aa11.94□□□□□ -0.5
IRF3-216ENST00000597180 LECT2O14960 151 aa11.93□□□□□ -0.5
IRF3-216ENST00000597180 HLA-DQA1P01909 254 aa11.93□□□□□ -0.5
IRF3-216ENST00000597180 TMEM101Q96IK0 257 aa11.93□□□□□ -0.5
IRF3-216ENST00000597180 IGLV10-54A0A075B6I4 117 aa11.92□□□□□ -0.5
IRF3-216ENST00000597180 OR5A1Q8NGJ0 315 aa11.92□□□□□ -0.5
IRF3-216ENST00000597180 GNB1LQ9BYB4 327 aa11.92□□□□□ -0.5
IRF3-216ENST00000597180 CSDC2Q9Y534 153 aaKnown RBP11.92□□□□□ -0.5
IRF3-216ENST00000597180 SMAGPQ0VAQ4 97 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms