RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 KRTAP26-1Q6PEX3 210 aa6.88□□□□□ -1.31
CCDC9-203ENST00000596938 LINC01551Q86U37 167 aa6.88□□□□□ -1.31
CCDC9-203ENST00000596938 GFRA4Q9GZZ7 299 aa6.88□□□□□ -1.31
CCDC9-203ENST00000596938 TRAV8-4A0A0B4J246 113 aa6.87□□□□□ -1.31
CCDC9-203ENST00000596938 COTL1Q14019 142 aa6.87□□□□□ -1.31
CCDC9-203ENST00000596938 FAM74A3Q4VXF1 159 aa6.87□□□□□ -1.31
CCDC9-203ENST00000596938 C20orf203Q8NBC4 194 aa6.87□□□□□ -1.31
CCDC9-203ENST00000596938 TSKUQ8WUA8 353 aa6.87□□□□□ -1.31
CCDC9-203ENST00000596938 OSTCQ9NRP0 149 aa6.87□□□□□ -1.31
CCDC9-203ENST00000596938 TRAV26-2A0A0B4J265 109 aa6.86□□□□□ -1.31
CCDC9-203ENST00000596938 USP17L23D6RBM5 183 aa6.86□□□□□ -1.31
CCDC9-203ENST00000596938 NCR2O95944 276 aa6.86□□□□□ -1.31
CCDC9-203ENST00000596938 INAFM2P0DMQ5 153 aa6.86□□□□□ -1.31
CCDC9-203ENST00000596938 HAMPP81172 84 aa6.86□□□□□ -1.31
CCDC9-203ENST00000596938 REG3AQ06141 175 aa6.86□□□□□ -1.31
CCDC9-203ENST00000596938 DGAT2L7PQ6IED9 249 aa6.86□□□□□ -1.31
CCDC9-203ENST00000596938 BORCS7Q96B45 105 aa6.86□□□□□ -1.31
CCDC9-203ENST00000596938 IGLV4-60A0A075B6I1 120 aa6.85□□□□□ -1.31
CCDC9-203ENST00000596938 A0A1B0GUT8 65 aa6.85□□□□□ -1.31
CCDC9-203ENST00000596938 HIGD1CA8MV81 97 aa6.85□□□□□ -1.31
CCDC9-203ENST00000596938 UBE2L6O14933 153 aa6.85□□□□□ -1.31
CCDC9-203ENST00000596938 AMTP48728 403 aa6.85□□□□□ -1.31
CCDC9-203ENST00000596938 TMEM241Q24JQ0 296 aa6.85□□□□□ -1.31
CCDC9-203ENST00000596938 LINC01620Q4KN68 170 aa6.85□□□□□ -1.31
CCDC9-203ENST00000596938 SMDT1Q9H4I9 107 aa6.85□□□□□ -1.31
CCDC9-203ENST00000596938 HERC1Q15751 4861 aa6.85□□□□□ -1.31
CCDC9-203ENST00000596938 TRBV6-5A0A0K0K1A5 114 aa6.84□□□□□ -1.31
CCDC9-203ENST00000596938 H7C423 109 aa6.84□□□□□ -1.31
CCDC9-203ENST00000596938 HLA-DQA1P01909 254 aa6.84□□□□□ -1.31
CCDC9-203ENST00000596938 PRSS1P07477 247 aa6.84□□□□□ -1.31
CCDC9-203ENST00000596938 CLPSL2Q6UWE3 100 aa6.84□□□□□ -1.31
CCDC9-203ENST00000596938 CLRN3Q8NCR9 226 aa6.84□□□□□ -1.31
CCDC9-203ENST00000596938 DEFB104AQ8WTQ1 72 aa6.84□□□□□ -1.31
CCDC9-203ENST00000596938 RPL39LQ96EH5 51 aaKnown RBP6.84□□□□□ -1.31
CCDC9-203ENST00000596938 CHAC1Q9BUX1 264 aa6.84□□□□□ -1.31
CCDC9-203ENST00000596938 TMEM191AQ9H0A3 160 aa6.84□□□□□ -1.31
CCDC9-203ENST00000596938 V9GYV3 84 aa6.84□□□□□ -1.31
CCDC9-203ENST00000596938 MYCBP2O75592 4640 aa6.83□□□□□ -1.32
CCDC9-203ENST00000596938 SDHAF1A6NFY7 115 aa6.83□□□□□ -1.32
CCDC9-203ENST00000596938 C9JQL5 133 aa6.83□□□□□ -1.32
CCDC9-203ENST00000596938 PEA15Q15121 130 aa6.83□□□□□ -1.32
CCDC9-203ENST00000596938 ISOC2Q96AB3 205 aa6.83□□□□□ -1.32
CCDC9-203ENST00000596938 IGLV10-54A0A075B6I4 117 aa6.82□□□□□ -1.32
CCDC9-203ENST00000596938 I3L3M4 83 aa6.82□□□□□ -1.32
CCDC9-203ENST00000596938 RAB4AP20338 218 aa6.82□□□□□ -1.32
CCDC9-203ENST00000596938 PMCHP20382 165 aa6.82□□□□□ -1.32
CCDC9-203ENST00000596938 RPL23P62829 140 aaKnown RBP6.82□□□□□ -1.32
CCDC9-203ENST00000596938 RIGQ13278 110 aa6.82□□□□□ -1.32
CCDC9-203ENST00000596938 SCXQ7RTU7 201 aa6.82□□□□□ -1.32
CCDC9-203ENST00000596938 C9orf163Q8N9P6 203 aa6.82□□□□□ -1.32
CCDC9-203ENST00000596938 NUP35Q8NFH5 326 aa6.82□□□□□ -1.32
CCDC9-203ENST00000596938 MRAP2Q96G30 205 aa6.82□□□□□ -1.32
CCDC9-203ENST00000596938 NAT8Q9UHE5 227 aa6.82□□□□□ -1.32
CCDC9-203ENST00000596938 APCSP02743 223 aa6.81□□□□□ -1.32
CCDC9-203ENST00000596938 PLA2G1BP04054 148 aaKnown RBP6.81□□□□□ -1.32
CCDC9-203ENST00000596938 POLR2KP53803 58 aaKnown RBP6.81□□□□□ -1.32
CCDC9-203ENST00000596938 SRSF3P84103 164 aaKnown RBP6.81□□□□□ -1.32
CCDC9-203ENST00000596938 RNF185Q96GF1 192 aa6.81□□□□□ -1.32
CCDC9-203ENST00000596938 ST20Q9HBF5 79 aa6.81□□□□□ -1.32
CCDC9-203ENST00000596938 NAT8BQ9UHF3 227 aa6.81□□□□□ -1.32
CCDC9-203ENST00000596938 TRBV27A0A0K0K1C4 114 aa6.8□□□□□ -1.32
CCDC9-203ENST00000596938 SMIM27A0A1W2PRY6 76 aa6.8□□□□□ -1.32
CCDC9-203ENST00000596938 GAS8-AS1O95177 125 aa6.8□□□□□ -1.32
CCDC9-203ENST00000596938 FGF6P10767 208 aa6.8□□□□□ -1.32
CCDC9-203ENST00000596938 ESDP10768 282 aa6.8□□□□□ -1.32
CCDC9-203ENST00000596938 ZNF25P17030 456 aaPredicted RBP6.8□□□□□ -1.32
CCDC9-203ENST00000596938 CNBPP62633 177 aaKnown RBP6.8□□□□□ -1.32
CCDC9-203ENST00000596938 AMMECR1LQ6DCA0 310 aa6.8□□□□□ -1.32
CCDC9-203ENST00000596938 AMN1Q8IY45 258 aa6.8□□□□□ -1.32
CCDC9-203ENST00000596938 CIRBP-AS1Q8TBR5 109 aa6.8□□□□□ -1.32
CCDC9-203ENST00000596938 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.79□□□□□ -1.32
CCDC9-203ENST00000596938 IGKV2-29A2NJV5 120 aaPredicted RBP6.79□□□□□ -1.32
CCDC9-203ENST00000596938 VCYO14598 125 aa6.79□□□□□ -1.32
CCDC9-203ENST00000596938 PPP1R17O96001 155 aa6.79□□□□□ -1.32
CCDC9-203ENST00000596938 TSHBP01222 138 aa6.79□□□□□ -1.32
CCDC9-203ENST00000596938 ADIRFQ15847 76 aa6.79□□□□□ -1.32
CCDC9-203ENST00000596938 RNASEKQ6P5S7 137 aaKnown RBP6.79□□□□□ -1.32
CCDC9-203ENST00000596938 SDIM1Q6ZPB5 146 aa6.79□□□□□ -1.32
CCDC9-203ENST00000596938 LINC00528Q8N1L1 170 aa6.79□□□□□ -1.32
CCDC9-203ENST00000596938 A0A1B0GW15 77 aa6.78□□□□□ -1.32
CCDC9-203ENST00000596938 RPS10P46783 165 aaKnown RBP6.78□□□□□ -1.32
CCDC9-203ENST00000596938 CFAP161Q6P656 301 aa6.78□□□□□ -1.32
CCDC9-203ENST00000596938 AP5S1Q9NUS5 200 aa6.78□□□□□ -1.32
CCDC9-203ENST00000596938 hDV102S1A0JD36 115 aa6.77□□□□□ -1.33
CCDC9-203ENST00000596938 LINC00862A6NCI5 91 aa6.77□□□□□ -1.33
CCDC9-203ENST00000596938 GAGE12HA6NDE8 117 aa6.77□□□□□ -1.33
CCDC9-203ENST00000596938 SLPIP03973 132 aa6.77□□□□□ -1.33
CCDC9-203ENST00000596938 FAM104BQ5XKR9 115 aa6.77□□□□□ -1.33
CCDC9-203ENST00000596938 MRPL52Q86TS9 123 aaKnown RBP6.77□□□□□ -1.33
CCDC9-203ENST00000596938 OR5A1Q8NGJ0 315 aa6.77□□□□□ -1.33
CCDC9-203ENST00000596938 CHCHD10Q8WYQ3 142 aaPredicted RBP6.77□□□□□ -1.33
CCDC9-203ENST00000596938 TMEM101Q96IK0 257 aa6.77□□□□□ -1.33
CCDC9-203ENST00000596938 BTF3L4Q96K17 158 aa6.77□□□□□ -1.33
CCDC9-203ENST00000596938 TMEM242Q9NWH2 141 aa6.77□□□□□ -1.33
CCDC9-203ENST00000596938 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.76□□□□□ -1.33
CCDC9-203ENST00000596938 IGKV3OR2-268A0A0C4DH90 116 aa6.76□□□□□ -1.33
CCDC9-203ENST00000596938 NRACQ8N912 160 aa6.76□□□□□ -1.33
CCDC9-203ENST00000596938 CDC42SE2Q9NRR3 84 aa6.76□□□□□ -1.33
CCDC9-203ENST00000596938 TRBV24-1A0A075B6N3 115 aa6.75□□□□□ -1.33
CCDC9-203ENST00000596938 LINC00959A0A1B0GUT2 108 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms