RNA–Protein interactions for RNA: ENST00000596648.1

POLD1-208, Transcript of DNA polymerase delta 1, catalytic subunit, human

TSL 5

Gene POLD1, Length 1,048 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLD1-208	ENST00000596648	IGLV10-54	A0A075B6I4	117 aa		12.12	□□□□□ -0.47
POLD1-208	ENST00000596648	C9orf163	Q8N9P6	203 aa		12.12	□□□□□ -0.47
POLD1-208	ENST00000596648	RPP21	Q9H633	154 aa	Known RBP	12.12	□□□□□ -0.47
POLD1-208	ENST00000596648	IGLV4-60	A0A075B6I1	120 aa		12.11	□□□□□ -0.47
POLD1-208	ENST00000596648		K7EN84	100 aa		12.11	□□□□□ -0.47
POLD1-208	ENST00000596648	OCC1	Q8TAD7	63 aa		12.11	□□□□□ -0.47
POLD1-208	ENST00000596648	RNASE7	Q9H1E1	156 aa	Known RBP	12.11	□□□□□ -0.47
POLD1-208	ENST00000596648	TRAV8-4	A0A0B4J246	113 aa		12.1	□□□□□ -0.47
POLD1-208	ENST00000596648	TWIST1	Q15672	202 aa		12.1	□□□□□ -0.47
POLD1-208	ENST00000596648	GFRA4	Q9GZZ7	299 aa		12.1	□□□□□ -0.47
POLD1-208	ENST00000596648	PLA2G2D	Q9UNK4	145 aa		12.1	□□□□□ -0.47
POLD1-208	ENST00000596648		Q6ZNX1	250 aa		12.09	□□□□□ -0.47
POLD1-208	ENST00000596648	CLRN3	Q8NCR9	226 aa		12.09	□□□□□ -0.47
POLD1-208	ENST00000596648	AMT	P48728	403 aa		12.08	□□□□□ -0.48
POLD1-208	ENST00000596648	COTL1	Q14019	142 aa		12.08	□□□□□ -0.48
POLD1-208	ENST00000596648	GATD1	Q8NB37	220 aa		12.08	□□□□□ -0.48
POLD1-208	ENST00000596648	GTSF1	Q8WW33	167 aa		12.08	□□□□□ -0.48
POLD1-208	ENST00000596648	UBE2L6	O14933	153 aa		12.07	□□□□□ -0.48
POLD1-208	ENST00000596648	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	12.07	□□□□□ -0.48
POLD1-208	ENST00000596648	TRAV26-2	A0A0B4J265	109 aa		12.06	□□□□□ -0.48
POLD1-208	ENST00000596648	TMEM250	H0YL14	139 aa		12.06	□□□□□ -0.48
POLD1-208	ENST00000596648	CNBP	P62633	177 aa	Known RBP	12.06	□□□□□ -0.48
POLD1-208	ENST00000596648	ALKAL2	Q6UX46	152 aa		12.05	□□□□□ -0.48
POLD1-208	ENST00000596648	SDIM1	Q6ZPB5	146 aa		12.05	□□□□□ -0.48
POLD1-208	ENST00000596648	AKAP14	Q86UN6	197 aa		12.05	□□□□□ -0.48
POLD1-208	ENST00000596648	RNF213	Q63HN8	5207 aa		12.05	□□□□□ -0.48
POLD1-208	ENST00000596648	hDV102S1	A0JD36	115 aa		12.04	□□□□□ -0.48
POLD1-208	ENST00000596648	PANO1	I0J062	215 aa		12.04	□□□□□ -0.48
POLD1-208	ENST00000596648	BLOC1S1	P78537	153 aa		12.04	□□□□□ -0.48
POLD1-208	ENST00000596648	FOXA3	P55318	350 aa	Predicted RBP	12.03	□□□□□ -0.48
POLD1-208	ENST00000596648	RPL37A	P61513	92 aa	Known RBP	12.03	□□□□□ -0.48
POLD1-208	ENST00000596648	FAM231D	Q6ZW35	169 aa		12.03	□□□□□ -0.48
POLD1-208	ENST00000596648	SMIM15	Q7Z3B0	74 aa		12.03	□□□□□ -0.48
POLD1-208	ENST00000596648	LYPD6B	Q8NI32	183 aa		12.03	□□□□□ -0.48
POLD1-208	ENST00000596648	RPL39L	Q96EH5	51 aa	Known RBP	12.03	□□□□□ -0.48
POLD1-208	ENST00000596648	GATC	O43716	136 aa	Known RBP	12.02	□□□□□ -0.49
POLD1-208	ENST00000596648	NCR2	O95944	276 aa		12.02	□□□□□ -0.49
POLD1-208	ENST00000596648		A8MWL6	223 aa		12.01	□□□□□ -0.49
POLD1-208	ENST00000596648	SLPI	P03973	132 aa		12.01	□□□□□ -0.49
POLD1-208	ENST00000596648	TEX261	Q6UWH6	196 aa		12.01	□□□□□ -0.49
POLD1-208	ENST00000596648	AP5S1	Q9NUS5	200 aa		12.01	□□□□□ -0.49
POLD1-208	ENST00000596648	OXT	P01178	125 aa		12	□□□□□ -0.49
POLD1-208	ENST00000596648	LRP2	P98164	4655 aa		12	□□□□□ -0.49
POLD1-208	ENST00000596648	CIRBP	Q14011	172 aa	Known RBP	12	□□□□□ -0.49
POLD1-208	ENST00000596648	CT83	Q5H943	113 aa		12	□□□□□ -0.49
POLD1-208	ENST00000596648	hCG_2014768	A0A024R1R8	64 aa		11.99	□□□□□ -0.49
POLD1-208	ENST00000596648	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.99	□□□□□ -0.49
POLD1-208	ENST00000596648	GAGE12H	A6NDE8	117 aa		11.99	□□□□□ -0.49
POLD1-208	ENST00000596648	SDHAF1	A6NFY7	115 aa		11.99	□□□□□ -0.49
POLD1-208	ENST00000596648	CEBPG	P53567	150 aa		11.99	□□□□□ -0.49
POLD1-208	ENST00000596648	AMMECR1L	Q6DCA0	310 aa		11.99	□□□□□ -0.49
POLD1-208	ENST00000596648	IGHV3-64	A0A075B6Q5	118 aa		11.98	□□□□□ -0.49
POLD1-208	ENST00000596648	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.98	□□□□□ -0.49
POLD1-208	ENST00000596648	IGKV3OR2-268	A0A0C4DH90	116 aa		11.98	□□□□□ -0.49
POLD1-208	ENST00000596648	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.98	□□□□□ -0.49
POLD1-208	ENST00000596648		H7C423	109 aa		11.98	□□□□□ -0.49
POLD1-208	ENST00000596648	APCS	P02743	223 aa		11.98	□□□□□ -0.49
POLD1-208	ENST00000596648	C15orf56	Q8N910	161 aa		11.98	□□□□□ -0.49
POLD1-208	ENST00000596648	TNXB	P22105	4242 aa		11.98	□□□□□ -0.49
POLD1-208	ENST00000596648	HNRNPA3	P51991	378 aa	Known RBP	11.97	□□□□□ -0.49
POLD1-208	ENST00000596648	TRBV6-5	A0A0K0K1A5	114 aa		11.96	□□□□□ -0.49
POLD1-208	ENST00000596648	NDUFS6	O75380	124 aa	Known RBP	11.96	□□□□□ -0.49
POLD1-208	ENST00000596648	FGF6	P10767	208 aa		11.96	□□□□□ -0.49
POLD1-208	ENST00000596648	RNASEK	Q6P5S7	137 aa	Known RBP	11.96	□□□□□ -0.49
POLD1-208	ENST00000596648	CFAP161	Q6P656	301 aa		11.96	□□□□□ -0.49
POLD1-208	ENST00000596648	LINC01551	Q86U37	167 aa		11.96	□□□□□ -0.49
POLD1-208	ENST00000596648	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.96	□□□□□ -0.49
POLD1-208	ENST00000596648	SMIM7	Q9BQ49	75 aa		11.96	□□□□□ -0.49
POLD1-208	ENST00000596648	FAM231B	A6NCW3	169 aa		11.95	□□□□□ -0.5
POLD1-208	ENST00000596648		I3L3M4	83 aa		11.95	□□□□□ -0.5
POLD1-208	ENST00000596648	BORCS7	Q96B45	105 aa		11.95	□□□□□ -0.5
POLD1-208	ENST00000596648	EIF5A2	Q9GZV4	153 aa	Known RBP	11.95	□□□□□ -0.5
POLD1-208	ENST00000596648	GAS8-AS1	O95177	125 aa		11.94	□□□□□ -0.5
POLD1-208	ENST00000596648	CHTF8	P0CG12	524 aa		11.94	□□□□□ -0.5
POLD1-208	ENST00000596648	ZNF25	P17030	456 aa	Predicted RBP	11.94	□□□□□ -0.5
POLD1-208	ENST00000596648	SPACA4	Q8TDM5	124 aa		11.94	□□□□□ -0.5
POLD1-208	ENST00000596648	TSKU	Q8WUA8	353 aa		11.94	□□□□□ -0.5
POLD1-208	ENST00000596648	RNF185	Q96GF1	192 aa		11.94	□□□□□ -0.5
POLD1-208	ENST00000596648		A0A1B0GUT8	65 aa		11.93	□□□□□ -0.5
POLD1-208	ENST00000596648	HIGD1C	A8MV81	97 aa		11.93	□□□□□ -0.5
POLD1-208	ENST00000596648	PMCH	P20382	165 aa		11.93	□□□□□ -0.5
POLD1-208	ENST00000596648	FAM210A	Q96ND0	272 aa		11.93	□□□□□ -0.5
POLD1-208	ENST00000596648	TMEM191A	Q9H0A3	160 aa		11.93	□□□□□ -0.5
POLD1-208	ENST00000596648		A0A087WYN8	130 aa		11.92	□□□□□ -0.5
POLD1-208	ENST00000596648	ZNF727	A8MUV8	499 aa		11.92	□□□□□ -0.5
POLD1-208	ENST00000596648	TSHB	P01222	138 aa		11.92	□□□□□ -0.5
POLD1-208	ENST00000596648	ESD	P10768	282 aa		11.92	□□□□□ -0.5
POLD1-208	ENST00000596648	HIGD2B	Q4VC39	106 aa		11.92	□□□□□ -0.5
POLD1-208	ENST00000596648	ST20	Q9HBF5	79 aa		11.92	□□□□□ -0.5
POLD1-208	ENST00000596648	OSTC	Q9NRP0	149 aa		11.92	□□□□□ -0.5
POLD1-208	ENST00000596648	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.91	□□□□□ -0.5
POLD1-208	ENST00000596648	SRP19	P09132	144 aa	Known RBP	11.91	□□□□□ -0.5
POLD1-208	ENST00000596648	RPS10	P46783	165 aa	Known RBP	11.91	□□□□□ -0.5
POLD1-208	ENST00000596648	OR5A1	Q8NGJ0	315 aa		11.91	□□□□□ -0.5
POLD1-208	ENST00000596648	DPH3	Q96FX2	82 aa		11.91	□□□□□ -0.5
POLD1-208	ENST00000596648	TMEM242	Q9NWH2	141 aa		11.91	□□□□□ -0.5
POLD1-208	ENST00000596648	FOXI1	Q12951	378 aa		11.9	□□□□□ -0.5
POLD1-208	ENST00000596648	TMEM101	Q96IK0	257 aa		11.9	□□□□□ -0.5
POLD1-208	ENST00000596648	BTF3L4	Q96K17	158 aa		11.9	□□□□□ -0.5
POLD1-208	ENST00000596648	RAB4A	P20338	218 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms