RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 PKIAP61925 76 aa7.43□□□□□ -1.22
LIG1-211ENST00000596457 IQCJQ1A5X6 159 aa7.43□□□□□ -1.22
LIG1-211ENST00000596457 FAM104BQ5XKR9 115 aa7.43□□□□□ -1.22
LIG1-211ENST00000596457 SPATA12Q7Z6I5 190 aa7.43□□□□□ -1.22
LIG1-211ENST00000596457 Q8N976 141 aa7.43□□□□□ -1.22
LIG1-211ENST00000596457 SEC11CQ9BY50 192 aa7.43□□□□□ -1.22
LIG1-211ENST00000596457 DNAH2Q9P225 4427 aa7.42□□□□□ -1.22
LIG1-211ENST00000596457 IGKV2D-24A0A075B6R9 120 aa7.42□□□□□ -1.22
LIG1-211ENST00000596457 I3L3M4 83 aa7.42□□□□□ -1.22
LIG1-211ENST00000596457 CRPP02741 224 aa7.42□□□□□ -1.22
LIG1-211ENST00000596457 CKS2P33552 79 aa7.42□□□□□ -1.22
LIG1-211ENST00000596457 FUSP35637 526 aaKnown RBP eCLIP7.42□□□□□ -1.22
LIG1-211ENST00000596457 LAGE3Q14657 143 aa7.42□□□□□ -1.22
LIG1-211ENST00000596457 CLPSL2Q6UWE3 100 aa7.42□□□□□ -1.22
LIG1-211ENST00000596457 CHCHD7Q9BUK0 85 aa7.42□□□□□ -1.22
LIG1-211ENST00000596457 TM2D2Q9BX73 214 aa7.42□□□□□ -1.22
LIG1-211ENST00000596457 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.41□□□□□ -1.22
LIG1-211ENST00000596457 A0A1B0GXF2 115 aa7.41□□□□□ -1.22
LIG1-211ENST00000596457 IGKV2-29A2NJV5 120 aaPredicted RBP7.41□□□□□ -1.22
LIG1-211ENST00000596457 APCSP02743 223 aa7.41□□□□□ -1.22
LIG1-211ENST00000596457 RBX1P62877 108 aa7.41□□□□□ -1.22
LIG1-211ENST00000596457 RMI2Q96E14 147 aa7.41□□□□□ -1.22
LIG1-211ENST00000596457 TMEM242Q9NWH2 141 aa7.41□□□□□ -1.22
LIG1-211ENST00000596457 A0A087WTM6 91 aa7.4□□□□□ -1.22
LIG1-211ENST00000596457 TRBV6-5A0A0K0K1A5 114 aa7.4□□□□□ -1.22
LIG1-211ENST00000596457 C16orf90A8MZG2 172 aa7.4□□□□□ -1.22
LIG1-211ENST00000596457 AMMECR1LQ6DCA0 310 aa7.4□□□□□ -1.22
LIG1-211ENST00000596457 ENHOQ6UWT2 76 aa7.4□□□□□ -1.22
LIG1-211ENST00000596457 ATP5L2Q7Z4Y8 100 aa7.4□□□□□ -1.22
LIG1-211ENST00000596457 TMEM70Q9BUB7 260 aa7.4□□□□□ -1.22
LIG1-211ENST00000596457 CTDSP1Q9GZU7 261 aa7.4□□□□□ -1.22
LIG1-211ENST00000596457 IGLV4-60A0A075B6I1 120 aa7.39□□□□□ -1.23
LIG1-211ENST00000596457 D6R8Y8 96 aa7.39□□□□□ -1.23
LIG1-211ENST00000596457 LECT2O14960 151 aa7.39□□□□□ -1.23
LIG1-211ENST00000596457 PPP1R17O96001 155 aa7.39□□□□□ -1.23
LIG1-211ENST00000596457 POLR2KP53803 58 aaKnown RBP7.39□□□□□ -1.23
LIG1-211ENST00000596457 KRTAP10-2P60368 255 aa7.39□□□□□ -1.23
LIG1-211ENST00000596457 Q0VG73 95 aa7.39□□□□□ -1.23
LIG1-211ENST00000596457 RNASEKQ6P5S7 137 aaKnown RBP7.39□□□□□ -1.23
LIG1-211ENST00000596457 LINC00269Q8N2A0 174 aa7.39□□□□□ -1.23
LIG1-211ENST00000596457 NRACQ8N912 160 aa7.39□□□□□ -1.23
LIG1-211ENST00000596457 BTF3L4Q96K17 158 aa7.39□□□□□ -1.23
LIG1-211ENST00000596457 RPS10P5Q9NQ39 176 aa7.39□□□□□ -1.23
LIG1-211ENST00000596457 IGKV3OR2-268A0A0C4DH90 116 aa7.38□□□□□ -1.23
LIG1-211ENST00000596457 VCYO14598 125 aa7.38□□□□□ -1.23
LIG1-211ENST00000596457 TNFRSF6BO95407 300 aa7.38□□□□□ -1.23
LIG1-211ENST00000596457 TSHBP01222 138 aa7.38□□□□□ -1.23
LIG1-211ENST00000596457 FCER1GP30273 86 aa7.38□□□□□ -1.23
LIG1-211ENST00000596457 SUMO2P61956 95 aaKnown RBP7.38□□□□□ -1.23
LIG1-211ENST00000596457 C20orf203Q8NBC4 194 aa7.38□□□□□ -1.23
LIG1-211ENST00000596457 BAALCQ8WXS3 180 aa7.38□□□□□ -1.23
LIG1-211ENST00000596457 C1orf43Q9BWL3 253 aa7.38□□□□□ -1.23
LIG1-211ENST00000596457 IGLV10-54A0A075B6I4 117 aa7.37□□□□□ -1.23
LIG1-211ENST00000596457 C7orf77A4D0Y5 90 aa7.37□□□□□ -1.23
LIG1-211ENST00000596457 APOC3P02656 99 aa7.37□□□□□ -1.23
LIG1-211ENST00000596457 S100PP25815 95 aa7.37□□□□□ -1.23
LIG1-211ENST00000596457 REG3AQ06141 175 aa7.37□□□□□ -1.23
LIG1-211ENST00000596457 C10orf91Q5T1B1 145 aa7.37□□□□□ -1.23
LIG1-211ENST00000596457 TMEM136Q6ZRR5 245 aa7.37□□□□□ -1.23
LIG1-211ENST00000596457 CLRN3Q8NCR9 226 aa7.37□□□□□ -1.23
LIG1-211ENST00000596457 IMMP2LQ96T52 175 aa7.37□□□□□ -1.23
LIG1-211ENST00000596457 COX11Q9Y6N1 276 aa7.37□□□□□ -1.23
LIG1-211ENST00000596457 TRBV27A0A0K0K1C4 114 aa7.36□□□□□ -1.23
LIG1-211ENST00000596457 A0A1B0GUV1 79 aa7.36□□□□□ -1.23
LIG1-211ENST00000596457 LRCOL1A6NCL2 159 aa7.36□□□□□ -1.23
LIG1-211ENST00000596457 NPYP01303 97 aa7.36□□□□□ -1.23
LIG1-211ENST00000596457 HLA-DQA1P01909 254 aa7.36□□□□□ -1.23
LIG1-211ENST00000596457 FGF6P10767 208 aa7.36□□□□□ -1.23
LIG1-211ENST00000596457 ORMDL3Q8N138 153 aa7.36□□□□□ -1.23
LIG1-211ENST00000596457 MAPKAPK5-AS1Q8N8E1 139 aa7.36□□□□□ -1.23
LIG1-211ENST00000596457 PRELID3AQ96N28 172 aa7.36□□□□□ -1.23
LIG1-211ENST00000596457 KIR2DL4Q99706 377 aa7.36□□□□□ -1.23
LIG1-211ENST00000596457 CARHSP1Q9Y2V2 147 aaKnown RBP7.36□□□□□ -1.23
LIG1-211ENST00000596457 FAT2Q9NYQ8 4349 aa7.35□□□□□ -1.23
LIG1-211ENST00000596457 LOC389332A0A1B0GUA5 103 aa7.35□□□□□ -1.23
LIG1-211ENST00000596457 PPBPP02775 128 aa7.35□□□□□ -1.23
LIG1-211ENST00000596457 WFDC2Q14508 124 aa7.35□□□□□ -1.23
LIG1-211ENST00000596457 MIAQ16674 131 aa7.35□□□□□ -1.23
LIG1-211ENST00000596457 NDUFA5Q16718 116 aa7.35□□□□□ -1.23
LIG1-211ENST00000596457 TMEM101Q96IK0 257 aa7.35□□□□□ -1.23
LIG1-211ENST00000596457 C20orf78Q9BR46 151 aa7.35□□□□□ -1.23
LIG1-211ENST00000596457 PGPEP1Q9NXJ5 209 aa7.35□□□□□ -1.23
LIG1-211ENST00000596457 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.34□□□□□ -1.23
LIG1-211ENST00000596457 TRBV24-1A0A075B6N3 115 aa7.34□□□□□ -1.23
LIG1-211ENST00000596457 H7C423 109 aa7.34□□□□□ -1.23
LIG1-211ENST00000596457 CDK2AP2O75956 126 aa7.34□□□□□ -1.23
LIG1-211ENST00000596457 ESDP10768 282 aa7.34□□□□□ -1.23
LIG1-211ENST00000596457 RHEBQ15382 184 aa7.34□□□□□ -1.23
LIG1-211ENST00000596457 KIAA1644Q3SXP7 199 aa7.34□□□□□ -1.23
LIG1-211ENST00000596457 Q8N814 137 aa7.34□□□□□ -1.23
LIG1-211ENST00000596457 SMIM2Q9BVW6 85 aa7.34□□□□□ -1.23
LIG1-211ENST00000596457 PRR34Q9NV39 138 aa7.34□□□□□ -1.23
LIG1-211ENST00000596457 PKD1P98161 4303 aa7.34□□□□□ -1.23
LIG1-211ENST00000596457 IGLV5-52A0A0A0MRZ9 124 aa7.33□□□□□ -1.24
LIG1-211ENST00000596457 TCAPO15273 167 aa7.33□□□□□ -1.24
LIG1-211ENST00000596457 DGAT2L7PQ6IED9 249 aa7.33□□□□□ -1.24
LIG1-211ENST00000596457 OR5A1Q8NGJ0 315 aa7.33□□□□□ -1.24
LIG1-211ENST00000596457 TRAV9-1A0A075B6T8 112 aa7.32□□□□□ -1.24
LIG1-211ENST00000596457 PHOX2AO14813 284 aa7.32□□□□□ -1.24
LIG1-211ENST00000596457 SNAPINO95295 136 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms