RNA–Protein interactions for RNA: ENST00000596365.5

LINC00649-208, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 682 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-208	ENST00000596365	PSMG3	Q9BT73	122 aa	Predicted RBP	5.23	□□□□□ -1.57
LINC00649-208	ENST00000596365	C5orf52	A6NGY3	159 aa		5.22	□□□□□ -1.57
LINC00649-208	ENST00000596365	PCP4L1	A6NKN8	68 aa		5.22	□□□□□ -1.57
LINC00649-208	ENST00000596365	RHOD	O00212	210 aa		5.22	□□□□□ -1.57
LINC00649-208	ENST00000596365	EIF3G	O75821	320 aa	Known RBP eCLIP	5.22	□□□□□ -1.57
LINC00649-208	ENST00000596365	S100A6	P06703	90 aa		5.22	□□□□□ -1.57
LINC00649-208	ENST00000596365	RNASE3	P12724	160 aa	Known RBP	5.22	□□□□□ -1.57
LINC00649-208	ENST00000596365	FGF7	P21781	194 aa		5.22	□□□□□ -1.57
LINC00649-208	ENST00000596365	SNRPE	P62304	92 aa	Known RBP	5.22	□□□□□ -1.57
LINC00649-208	ENST00000596365	GCSAML	Q5JQS6	135 aa		5.22	□□□□□ -1.57
LINC00649-208	ENST00000596365	UFSP1	Q6NVU6	142 aa		5.22	□□□□□ -1.57
LINC00649-208	ENST00000596365	TVP23C	Q96ET8	276 aa		5.22	□□□□□ -1.57
LINC00649-208	ENST00000596365	TCEAL7	Q9BRU2	100 aa		5.22	□□□□□ -1.57
LINC00649-208	ENST00000596365	PRR34	Q9NV39	138 aa		5.22	□□□□□ -1.57
LINC00649-208	ENST00000596365		A0A087WWL8	130 aa		5.21	□□□□□ -1.58
LINC00649-208	ENST00000596365	TRBV6-8	A0A0A6YYG3	113 aa		5.21	□□□□□ -1.58
LINC00649-208	ENST00000596365	IGKV2-24	A0A0C4DH68	120 aa		5.21	□□□□□ -1.58
LINC00649-208	ENST00000596365	MUC21	A0A0G2JKD1	596 aa		5.21	□□□□□ -1.58
LINC00649-208	ENST00000596365	OR7C2	O60412	319 aa		5.21	□□□□□ -1.58
LINC00649-208	ENST00000596365	NDUFS6	O75380	124 aa	Known RBP	5.21	□□□□□ -1.58
LINC00649-208	ENST00000596365	IFNA1	P01562	189 aa		5.21	□□□□□ -1.58
LINC00649-208	ENST00000596365	BCL2	P10415	239 aa		5.21	□□□□□ -1.58
LINC00649-208	ENST00000596365	TAGLN2	P37802	199 aa	Known RBP	5.21	□□□□□ -1.58
LINC00649-208	ENST00000596365	CEBPG	P53567	150 aa		5.21	□□□□□ -1.58
LINC00649-208	ENST00000596365	CACNG7	P62955	275 aa		5.21	□□□□□ -1.58
LINC00649-208	ENST00000596365	RPL36A	P83881	106 aa	Known RBP	5.21	□□□□□ -1.58
LINC00649-208	ENST00000596365	SERF2	P84101	59 aa		5.21	□□□□□ -1.58
LINC00649-208	ENST00000596365	COX6A2	Q02221	97 aa		5.21	□□□□□ -1.58
LINC00649-208	ENST00000596365	CMTM2	Q8TAZ6	248 aa		5.21	□□□□□ -1.58
LINC00649-208	ENST00000596365	MBD3L1	Q8WWY6	194 aa		5.21	□□□□□ -1.58
LINC00649-208	ENST00000596365	RPL36AL	Q969Q0	106 aa	Known RBP	5.21	□□□□□ -1.58
LINC00649-208	ENST00000596365	GNG13	Q9P2W3	67 aa		5.21	□□□□□ -1.58
LINC00649-208	ENST00000596365	MAP1LC3B2	A6NCE7	125 aa		5.2	□□□□□ -1.58
LINC00649-208	ENST00000596365		B4DEV8	164 aa		5.2	□□□□□ -1.58
LINC00649-208	ENST00000596365	S100A9	P06702	114 aa	Known RBP	5.2	□□□□□ -1.58
LINC00649-208	ENST00000596365	UBE2D3	P61077	147 aa		5.2	□□□□□ -1.58
LINC00649-208	ENST00000596365	UBE2D2	P62837	147 aa		5.2	□□□□□ -1.58
LINC00649-208	ENST00000596365	PNRC1	Q12796	327 aa	Predicted RBP	5.2	□□□□□ -1.58
LINC00649-208	ENST00000596365	ZNF726P1	Q15940	193 aa		5.2	□□□□□ -1.58
LINC00649-208	ENST00000596365	CLPSL2	Q6UWE3	100 aa		5.2	□□□□□ -1.58
LINC00649-208	ENST00000596365	GOLT1A	Q6ZVE7	132 aa		5.2	□□□□□ -1.58
LINC00649-208	ENST00000596365	LINC00269	Q8N2A0	174 aa		5.2	□□□□□ -1.58
LINC00649-208	ENST00000596365	CHCHD5	Q9BSY4	110 aa		5.2	□□□□□ -1.58
LINC00649-208	ENST00000596365	NDFIP1	Q9BT67	221 aa		5.2	□□□□□ -1.58
LINC00649-208	ENST00000596365	NPCDR1	Q9BY65	106 aa		5.2	□□□□□ -1.58
LINC00649-208	ENST00000596365	MAP1LC3B	Q9GZQ8	125 aa		5.2	□□□□□ -1.58
LINC00649-208	ENST00000596365	WDR61	Q9GZS3	305 aa	Known RBP	5.2	□□□□□ -1.58
LINC00649-208	ENST00000596365	JPT2	Q9H910	190 aa		5.2	□□□□□ -1.58
LINC00649-208	ENST00000596365	IGLV10-54	A0A075B6I4	117 aa		5.19	□□□□□ -1.58
LINC00649-208	ENST00000596365	TRBV7-3	A0A075B6L6	115 aa		5.19	□□□□□ -1.58
LINC00649-208	ENST00000596365	TRBV10-1	A0A0K0K1A3	114 aa		5.19	□□□□□ -1.58
LINC00649-208	ENST00000596365	ZNF727	A8MUV8	499 aa		5.19	□□□□□ -1.58
LINC00649-208	ENST00000596365	S100A4	P26447	101 aa	Known RBP	5.19	□□□□□ -1.58
LINC00649-208	ENST00000596365	RPS10	P46783	165 aa	Known RBP	5.19	□□□□□ -1.58
LINC00649-208	ENST00000596365	UBE2L3	P68036	154 aa	Known RBP	5.19	□□□□□ -1.58
LINC00649-208	ENST00000596365	CTAG1A	P78358	180 aa		5.19	□□□□□ -1.58
LINC00649-208	ENST00000596365	FABP9	Q0Z7S8	132 aa		5.19	□□□□□ -1.58
LINC00649-208	ENST00000596365	ATP6V1F	Q16864	119 aa		5.19	□□□□□ -1.58
LINC00649-208	ENST00000596365	ARL6IP6	Q8N6S5	226 aa		5.19	□□□□□ -1.58
LINC00649-208	ENST00000596365	PRSS3P2	Q8NHM4	247 aa		5.19	□□□□□ -1.58
LINC00649-208	ENST00000596365	OTOR	Q9NRC9	128 aa		5.19	□□□□□ -1.58
LINC00649-208	ENST00000596365	CTXND1	A0A1B0GTU2	59 aa		5.18	□□□□□ -1.58
LINC00649-208	ENST00000596365	MB	P02144	154 aa		5.18	□□□□□ -1.58
LINC00649-208	ENST00000596365	GZMB	P10144	247 aa		5.18	□□□□□ -1.58
LINC00649-208	ENST00000596365	ZNF80	P51504	273 aa	Predicted RBP	5.18	□□□□□ -1.58
LINC00649-208	ENST00000596365	ZNF674	Q2M3X9	581 aa		5.18	□□□□□ -1.58
LINC00649-208	ENST00000596365	FAM74A4	Q5TZK3	123 aa		5.18	□□□□□ -1.58
LINC00649-208	ENST00000596365	PRR26	Q8N8Z3	221 aa		5.18	□□□□□ -1.58
LINC00649-208	ENST00000596365	MANBAL	Q9NQG1	85 aa		5.18	□□□□□ -1.58
LINC00649-208	ENST00000596365	LINC00474	Q9P2X8	69 aa		5.18	□□□□□ -1.58
LINC00649-208	ENST00000596365	TGIF2-C20orf24	A0A0A6YYL0	155 aa		5.17	□□□□□ -1.58
LINC00649-208	ENST00000596365	TRAV8-4	A0A0B4J246	113 aa		5.17	□□□□□ -1.58
LINC00649-208	ENST00000596365	GCG	P01275	180 aa		5.17	□□□□□ -1.58
LINC00649-208	ENST00000596365		P01737	135 aa		5.17	□□□□□ -1.58
LINC00649-208	ENST00000596365	CXCL1	P09341	107 aa		5.17	□□□□□ -1.58
LINC00649-208	ENST00000596365	RBX1	P62877	108 aa		5.17	□□□□□ -1.58
LINC00649-208	ENST00000596365	CTDSP1	Q9GZU7	261 aa		5.17	□□□□□ -1.58
LINC00649-208	ENST00000596365		A0A096LNI7	61 aa		5.16	□□□□□ -1.58
LINC00649-208	ENST00000596365	C17orf112	F2Z3M2	114 aa		5.16	□□□□□ -1.58
LINC00649-208	ENST00000596365	TMEM250	H0YL14	139 aa		5.16	□□□□□ -1.58
LINC00649-208	ENST00000596365	MEF2B	Q02080	365 aa	Predicted RBP	5.16	□□□□□ -1.58
LINC00649-208	ENST00000596365	REG3A	Q06141	175 aa		5.16	□□□□□ -1.58
LINC00649-208	ENST00000596365	FOXI1	Q12951	378 aa		5.16	□□□□□ -1.58
LINC00649-208	ENST00000596365	TMEM97	Q5BJF2	176 aa		5.16	□□□□□ -1.58
LINC00649-208	ENST00000596365	CFAP161	Q6P656	301 aa		5.16	□□□□□ -1.58
LINC00649-208	ENST00000596365	OR10G8	Q8NGN5	311 aa		5.16	□□□□□ -1.58
LINC00649-208	ENST00000596365	SMIM7	Q9BQ49	75 aa		5.16	□□□□□ -1.58
LINC00649-208	ENST00000596365	ACTR3C	Q9C0K3	210 aa	Predicted RBP	5.16	□□□□□ -1.58
LINC00649-208	ENST00000596365	NIT2	Q9NQR4	276 aa		5.16	□□□□□ -1.58
LINC00649-208	ENST00000596365	KCNIP2	Q9NS61	270 aa		5.16	□□□□□ -1.58
LINC00649-208	ENST00000596365	TMEM242	Q9NWH2	141 aa		5.16	□□□□□ -1.58
LINC00649-208	ENST00000596365	IL36B	Q9NZH7	164 aa		5.16	□□□□□ -1.58
LINC00649-208	ENST00000596365	NAT8	Q9UHE5	227 aa		5.16	□□□□□ -1.58
LINC00649-208	ENST00000596365	PKIG	Q9Y2B9	76 aa		5.16	□□□□□ -1.58
LINC00649-208	ENST00000596365	TRBV24-1	A0A075B6N3	115 aa		5.15	□□□□□ -1.59
LINC00649-208	ENST00000596365	SERTM2	A0A1B0GWG4	89 aa		5.15	□□□□□ -1.59
LINC00649-208	ENST00000596365	CDC34	P49427	236 aa	Predicted RBP	5.15	□□□□□ -1.59
LINC00649-208	ENST00000596365	NDUFA6	P56556	154 aa		5.15	□□□□□ -1.59
LINC00649-208	ENST00000596365	TAS2R45	P59539	299 aa		5.15	□□□□□ -1.59
LINC00649-208	ENST00000596365	GAGE6	Q13070	117 aa		5.15	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms