RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 IGHV1-24A0A0C4DH33 117 aa13.3□□□□□ -0.28
PNKP-207ENST00000596014 LINC00587B1AMM8 73 aa13.3□□□□□ -0.28
PNKP-207ENST00000596014 LINC00694P0DN24 101 aa13.3□□□□□ -0.28
PNKP-207ENST00000596014 SMIM15Q7Z3B0 74 aa13.3□□□□□ -0.28
PNKP-207ENST00000596014 RNF185Q96GF1 192 aa13.3□□□□□ -0.28
PNKP-207ENST00000596014 TSTD3H0UI37 97 aa13.29□□□□□ -0.28
PNKP-207ENST00000596014 LINC00614P0C842 121 aa13.29□□□□□ -0.28
PNKP-207ENST00000596014 ZNRF2Q8NHG8 242 aa13.29□□□□□ -0.28
PNKP-207ENST00000596014 MRPS16Q9Y3D3 137 aaKnown RBP13.29□□□□□ -0.28
PNKP-207ENST00000596014 C3orf79P0CE67 100 aa13.28□□□□□ -0.28
PNKP-207ENST00000596014 CTAG1AP78358 180 aa13.28□□□□□ -0.28
PNKP-207ENST00000596014 SUMO4Q6EEV6 95 aa13.28□□□□□ -0.28
PNKP-207ENST00000596014 TEX43Q6ZNM6 134 aa13.28□□□□□ -0.28
PNKP-207ENST00000596014 Q8N976 141 aa13.28□□□□□ -0.28
PNKP-207ENST00000596014 ATP6V0E2Q8NHE4 81 aa13.28□□□□□ -0.28
PNKP-207ENST00000596014 UPK3BQ9BT76 320 aa13.28□□□□□ -0.28
PNKP-207ENST00000596014 PRO1933Q9H354 126 aa13.28□□□□□ -0.28
PNKP-207ENST00000596014 NCR2O95944 276 aa13.28□□□□□ -0.28
PNKP-207ENST00000596014 PMCHL1Q16048 86 aa13.28□□□□□ -0.28
PNKP-207ENST00000596014 TRBV7-3A0A075B6L6 115 aa13.27□□□□□ -0.29
PNKP-207ENST00000596014 SMKR1H3BMG3 65 aa13.27□□□□□ -0.29
PNKP-207ENST00000596014 M0QY20 66 aa13.27□□□□□ -0.29
PNKP-207ENST00000596014 RAB4AP20338 218 aa13.27□□□□□ -0.29
PNKP-207ENST00000596014 RPL36AP83881 106 aaKnown RBP13.27□□□□□ -0.29
PNKP-207ENST00000596014 FA2HQ7L5A8 372 aa13.27□□□□□ -0.29
PNKP-207ENST00000596014 NEXN-AS1Q8NBZ9 246 aa13.27□□□□□ -0.29
PNKP-207ENST00000596014 RPL36ALQ969Q0 106 aaKnown RBP13.27□□□□□ -0.29
PNKP-207ENST00000596014 H7C1H1 209 aa13.26□□□□□ -0.29
PNKP-207ENST00000596014 NPYP01303 97 aa13.26□□□□□ -0.29
PNKP-207ENST00000596014 CKS2P33552 79 aa13.26□□□□□ -0.29
PNKP-207ENST00000596014 TIRAPP58753 221 aa13.26□□□□□ -0.29
PNKP-207ENST00000596014 ZNF664Q8N3J9 261 aa13.26□□□□□ -0.29
PNKP-207ENST00000596014 IGLV2-18A0A075B6J9 118 aa13.25□□□□□ -0.29
PNKP-207ENST00000596014 PPBPP02775 128 aa13.25□□□□□ -0.29
PNKP-207ENST00000596014 GTSF1LQ9H1H1 148 aa13.25□□□□□ -0.29
PNKP-207ENST00000596014 Q9H8V8 135 aa13.25□□□□□ -0.29
PNKP-207ENST00000596014 AP5S1Q9NUS5 200 aa13.25□□□□□ -0.29
PNKP-207ENST00000596014 UBE2D3P61077 147 aa13.24□□□□□ -0.29
PNKP-207ENST00000596014 UBE2D2P62837 147 aa13.24□□□□□ -0.29
PNKP-207ENST00000596014 PRSS3P2Q8NHM4 247 aa13.24□□□□□ -0.29
PNKP-207ENST00000596014 LAMTOR2Q9Y2Q5 125 aa13.24□□□□□ -0.29
PNKP-207ENST00000596014 IFI27P40305 119 aaPredicted RBP13.23□□□□□ -0.29
PNKP-207ENST00000596014 TRAV26-2A0A0B4J265 109 aa13.22□□□□□ -0.29
PNKP-207ENST00000596014 BTF3P20290 206 aaKnown RBP13.22□□□□□ -0.29
PNKP-207ENST00000596014 DNAJC30Q96LL9 226 aa13.22□□□□□ -0.29
PNKP-207ENST00000596014 MAP1LC3AQ9H492 121 aa13.22□□□□□ -0.29
PNKP-207ENST00000596014 DNAH2Q9P225 4427 aa13.22□□□□□ -0.29
PNKP-207ENST00000596014 LOC389332A0A1B0GUA5 103 aa13.21□□□□□ -0.29
PNKP-207ENST00000596014 M0R2N4 97 aa13.21□□□□□ -0.29
PNKP-207ENST00000596014 LEPROTL1O95214 131 aa13.21□□□□□ -0.29
PNKP-207ENST00000596014 DDTP30046 118 aa13.21□□□□□ -0.29
PNKP-207ENST00000596014 VAMP8Q9BV40 100 aa13.21□□□□□ -0.29
PNKP-207ENST00000596014 TNFRSF18Q9Y5U5 241 aa13.21□□□□□ -0.29
PNKP-207ENST00000596014 SIVA1O15304 175 aa13.21□□□□□ -0.3
PNKP-207ENST00000596014 LELP1Q5T871 98 aa13.21□□□□□ -0.3
PNKP-207ENST00000596014 LINC00173Q6ZV60 143 aa13.2□□□□□ -0.3
PNKP-207ENST00000596014 WFDC10BQ8IUB3 73 aa13.2□□□□□ -0.3
PNKP-207ENST00000596014 NBDYA0A0U1RRE5 68 aa13.19□□□□□ -0.3
PNKP-207ENST00000596014 GAS8-AS1O95177 125 aa13.19□□□□□ -0.3
PNKP-207ENST00000596014 TNFRSF6BO95407 300 aa13.19□□□□□ -0.3
PNKP-207ENST00000596014 Q6ZR54 194 aa13.19□□□□□ -0.3
PNKP-207ENST00000596014 TMEM70Q9BUB7 260 aa13.19□□□□□ -0.3
PNKP-207ENST00000596014 HSPB8Q9UJY1 196 aa13.19□□□□□ -0.3
PNKP-207ENST00000596014 TRAV8-6A0A0B4J262 113 aa13.18□□□□□ -0.3
PNKP-207ENST00000596014 IGHV3-38A0A0C4DH36 116 aa13.18□□□□□ -0.3
PNKP-207ENST00000596014 DAZ4Q86SG3 579 aaKnown RBP13.18□□□□□ -0.3
PNKP-207ENST00000596014 MRAP2Q96G30 205 aa13.18□□□□□ -0.3
PNKP-207ENST00000596014 DAZ3Q9NR90 486 aaKnown RBP13.18□□□□□ -0.3
PNKP-207ENST00000596014 A0A096LNJ9 63 aa13.18□□□□□ -0.3
PNKP-207ENST00000596014 SPATA12Q7Z6I5 190 aa13.18□□□□□ -0.3
PNKP-207ENST00000596014 RPL39LQ96EH5 51 aaKnown RBP13.18□□□□□ -0.3
PNKP-207ENST00000596014 PAM16Q9Y3D7 125 aa13.18□□□□□ -0.3
PNKP-207ENST00000596014 DNAH10Q8IVF4 4471 aa13.17□□□□□ -0.3
PNKP-207ENST00000596014 LINC01546A6NGU7 62 aa13.16□□□□□ -0.3
PNKP-207ENST00000596014 SYS1-DBNDD2H3BUS1 97 aa13.16□□□□□ -0.3
PNKP-207ENST00000596014 NRACQ8N912 160 aa13.16□□□□□ -0.3
PNKP-207ENST00000596014 NXT2Q9NPJ8 142 aaKnown RBP13.16□□□□□ -0.3
PNKP-207ENST00000596014 HBDP02042 147 aa13.15□□□□□ -0.3
PNKP-207ENST00000596014 MAP1LC3CQ9BXW4 147 aa13.15□□□□□ -0.3
PNKP-207ENST00000596014 C20orf202A1L168 122 aa13.15□□□□□ -0.31
PNKP-207ENST00000596014 DNAH10OSP0CZ25 163 aa13.15□□□□□ -0.31
PNKP-207ENST00000596014 KRTAP1-5Q9BYS1 174 aa13.15□□□□□ -0.31
PNKP-207ENST00000596014 TRBV6-8A0A0A6YYG3 113 aa13.14□□□□□ -0.31
PNKP-207ENST00000596014 TTC32Q5I0X7 151 aa13.14□□□□□ -0.31
PNKP-207ENST00000596014 SPATA45Q537H7 98 aa13.13□□□□□ -0.31
PNKP-207ENST00000596014 PET117Q6UWS5 81 aa13.13□□□□□ -0.31
PNKP-207ENST00000596014 Q8N8P6 123 aa13.13□□□□□ -0.31
PNKP-207ENST00000596014 FRAS1Q86XX4 4008 aa13.13□□□□□ -0.31
PNKP-207ENST00000596014 TRBV6-5A0A0K0K1A5 114 aa13.12□□□□□ -0.31
PNKP-207ENST00000596014 PRSS47A8MTI9 375 aa13.12□□□□□ -0.31
PNKP-207ENST00000596014 TMEM97Q5BJF2 176 aa13.12□□□□□ -0.31
PNKP-207ENST00000596014 NTM-AS1Q6ZSK4 140 aa13.12□□□□□ -0.31
PNKP-207ENST00000596014 ATOH7Q8N100 152 aa13.12□□□□□ -0.31
PNKP-207ENST00000596014 LINC01556Q5JQF7 62 aa13.12□□□□□ -0.31
PNKP-207ENST00000596014 TRAV9-2A0A087WT02 112 aa13.11□□□□□ -0.31
PNKP-207ENST00000596014 SDHAF1A6NFY7 115 aa13.1□□□□□ -0.31
PNKP-207ENST00000596014 K7EP13 123 aa13.1□□□□□ -0.31
PNKP-207ENST00000596014 C14orf144Q96I85 54 aa13.1□□□□□ -0.31
PNKP-207ENST00000596014 SMIM2Q9BVW6 85 aa13.1□□□□□ -0.31
PNKP-207ENST00000596014 ST20Q9HBF5 79 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms