RNA–Protein interactions for RNA: ENST00000595541.1

SIN3B-206, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2 BASIC

Gene SIN3B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-206ENST00000595541 H7C423 109 aa12.05□□□□□ -0.48
SIN3B-206ENST00000595541 MRPS36P82909 103 aaKnown RBP12.05□□□□□ -0.48
SIN3B-206ENST00000595541 K7EQG2 157 aa12.04□□□□□ -0.48
SIN3B-206ENST00000595541 GAGE2BQ13066 116 aa12.04□□□□□ -0.48
SIN3B-206ENST00000595541 GAGE2EQ4V326 116 aa12.04□□□□□ -0.48
SIN3B-206ENST00000595541 CLEC2BQ92478 149 aa12.04□□□□□ -0.48
SIN3B-206ENST00000595541 GAGE2DQ9UEU5 116 aa12.04□□□□□ -0.48
SIN3B-206ENST00000595541 NACAE9PAV3 2078 aa12.04□□□□□ -0.48
SIN3B-206ENST00000595541 Q6ZSN1 163 aa12.04□□□□□ -0.48
SIN3B-206ENST00000595541 UTP20O75691 2785 aaKnown RBP12.04□□□□□ -0.48
SIN3B-206ENST00000595541 NDUFV3P56181 108 aaKnown RBP12.03□□□□□ -0.48
SIN3B-206ENST00000595541 SNCGO76070 127 aa12.03□□□□□ -0.48
SIN3B-206ENST00000595541 PSMB8P28062 276 aa12.03□□□□□ -0.48
SIN3B-206ENST00000595541 RPL13AP40429 203 aaKnown RBP12.03□□□□□ -0.48
SIN3B-206ENST00000595541 LINC01600Q96MT4 127 aa12.03□□□□□ -0.48
SIN3B-206ENST00000595541 NDUFA12Q9UI09 145 aa12.03□□□□□ -0.48
SIN3B-206ENST00000595541 ICOSQ9Y6W8 199 aa12.03□□□□□ -0.48
SIN3B-206ENST00000595541 DAND5Q8N907 189 aa12.02□□□□□ -0.48
SIN3B-206ENST00000595541 IGHV1-58A0A0C4DH39 117 aa12.01□□□□□ -0.49
SIN3B-206ENST00000595541 CCDC179H3BU77 68 aa12.01□□□□□ -0.49
SIN3B-206ENST00000595541 LY6DQ14210 128 aa12.01□□□□□ -0.49
SIN3B-206ENST00000595541 C15orf53Q8NAA6 179 aa12.01□□□□□ -0.49
SIN3B-206ENST00000595541 SNRPD3P62318 126 aaKnown RBP12.01□□□□□ -0.49
SIN3B-206ENST00000595541 C2orf82Q6UX34 121 aa12.01□□□□□ -0.49
SIN3B-206ENST00000595541 PYGO1Q9Y3Y4 419 aa12.01□□□□□ -0.49
SIN3B-206ENST00000595541 MXRA5Q9NR99 2828 aa12.01□□□□□ -0.49
SIN3B-206ENST00000595541 TRAV8-4A0A0B4J246 113 aa12.01□□□□□ -0.49
SIN3B-206ENST00000595541 SYNJ2BPP57105 145 aa12.01□□□□□ -0.49
SIN3B-206ENST00000595541 H3BMM0 161 aa12□□□□□ -0.49
SIN3B-206ENST00000595541 UBE2WQ96B02 151 aa12□□□□□ -0.49
SIN3B-206ENST00000595541 VSIG2Q96IQ7 327 aa12□□□□□ -0.49
SIN3B-206ENST00000595541 TNFRSF18Q9Y5U5 241 aa12□□□□□ -0.49
SIN3B-206ENST00000595541 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.99□□□□□ -0.49
SIN3B-206ENST00000595541 IGHV4-30-2A0A087WSY4 118 aa11.99□□□□□ -0.49
SIN3B-206ENST00000595541 IGKV2-29A2NJV5 120 aaPredicted RBP11.99□□□□□ -0.49
SIN3B-206ENST00000595541 CHCHD7Q9BUK0 85 aa11.99□□□□□ -0.49
SIN3B-206ENST00000595541 MIAQ16674 131 aa11.99□□□□□ -0.49
SIN3B-206ENST00000595541 TTC32Q5I0X7 151 aa11.99□□□□□ -0.49
SIN3B-206ENST00000595541 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.99□□□□□ -0.49
SIN3B-206ENST00000595541 DUX3Q96PT4 197 aa11.99□□□□□ -0.49
SIN3B-206ENST00000595541 SPANXDQ9BXN6 97 aa11.99□□□□□ -0.49
SIN3B-206ENST00000595541 SPANXCQ9NY87 97 aa11.99□□□□□ -0.49
SIN3B-206ENST00000595541 FLNCQ14315 2725 aa11.98□□□□□ -0.49
SIN3B-206ENST00000595541 IGHV3-38A0A0C4DH36 116 aa11.98□□□□□ -0.49
SIN3B-206ENST00000595541 C10orf105Q8TEF2 133 aa11.98□□□□□ -0.49
SIN3B-206ENST00000595541 IGHV4-59P01825 116 aa11.97□□□□□ -0.49
SIN3B-206ENST00000595541 UBE2D4Q9Y2X8 147 aa11.97□□□□□ -0.49
SIN3B-206ENST00000595541 TMEM61Q8N0U2 210 aa11.97□□□□□ -0.49
SIN3B-206ENST00000595541 USP9YO00507 2555 aaPredicted RBP11.97□□□□□ -0.49
SIN3B-206ENST00000595541 GAGE12JA6NER3 117 aa11.96□□□□□ -0.49
SIN3B-206ENST00000595541 GAGE7O76087 117 aa11.96□□□□□ -0.49
SIN3B-206ENST00000595541 GAGE12FP0CL80 117 aa11.96□□□□□ -0.49
SIN3B-206ENST00000595541 GAGE12GP0CL81 117 aa11.96□□□□□ -0.49
SIN3B-206ENST00000595541 GAGE12IP0CL82 117 aa11.96□□□□□ -0.49
SIN3B-206ENST00000595541 IFITM1P13164 125 aa11.96□□□□□ -0.49
SIN3B-206ENST00000595541 GAGE4Q13068 117 aa11.96□□□□□ -0.49
SIN3B-206ENST00000595541 PIMREGQ9BSJ6 248 aa11.96□□□□□ -0.49
SIN3B-206ENST00000595541 LINC00467Q9BRT7 94 aa11.96□□□□□ -0.49
SIN3B-206ENST00000595541 CDKN2A-AS1Q9UH64 79 aa11.96□□□□□ -0.5
SIN3B-206ENST00000595541 TRGV11A0A075B6L2 103 aa11.95□□□□□ -0.5
SIN3B-206ENST00000595541 TINCRA0A1B0GVN0 87 aa11.95□□□□□ -0.5
SIN3B-206ENST00000595541 RBMY1BA6NDE4 496 aaKnown RBP11.95□□□□□ -0.5
SIN3B-206ENST00000595541 RBMY1EA6NEQ0 496 aaKnown RBP11.95□□□□□ -0.5
SIN3B-206ENST00000595541 RBMY1DP0C7P1 496 aaKnown RBP11.95□□□□□ -0.5
SIN3B-206ENST00000595541 CITED2Q99967 270 aaPredicted RBP11.95□□□□□ -0.5
SIN3B-206ENST00000595541 CFAP46Q8IYW2 2715 aa11.94□□□□□ -0.5
SIN3B-206ENST00000595541 LST1O00453 97 aa11.94□□□□□ -0.5
SIN3B-206ENST00000595541 MSMBP08118 114 aa11.94□□□□□ -0.5
SIN3B-206ENST00000595541 Q6Q795 121 aa11.93□□□□□ -0.5
SIN3B-206ENST00000595541 EDA2RQ9HAV5 297 aa11.93□□□□□ -0.5
SIN3B-206ENST00000595541 COX6A2Q02221 97 aa11.93□□□□□ -0.5
SIN3B-206ENST00000595541 A0A0U1RRA0 63 aa11.92□□□□□ -0.5
SIN3B-206ENST00000595541 DEFB112Q30KQ8 113 aa11.92□□□□□ -0.5
SIN3B-206ENST00000595541 YAE1D1Q9NRH1 226 aa11.92□□□□□ -0.5
SIN3B-206ENST00000595541 H3BT86 120 aa11.92□□□□□ -0.5
SIN3B-206ENST00000595541 RNF152Q8N8N0 203 aa11.92□□□□□ -0.5
SIN3B-206ENST00000595541 ZNF625Q96I27 306 aaPredicted RBP11.92□□□□□ -0.5
SIN3B-206ENST00000595541 UCNP55089 124 aa11.91□□□□□ -0.5
SIN3B-206ENST00000595541 TMEM101Q96IK0 257 aa11.91□□□□□ -0.5
SIN3B-206ENST00000595541 COX6CP09669 75 aa11.91□□□□□ -0.5
SIN3B-206ENST00000595541 GNLYP22749 145 aa11.91□□□□□ -0.5
SIN3B-206ENST00000595541 HOXD3P31249 432 aaPredicted RBP11.91□□□□□ -0.5
SIN3B-206ENST00000595541 DEFB131AP59861 70 aa11.91□□□□□ -0.5
SIN3B-206ENST00000595541 C18orf65Q6ZTR6 163 aa11.9□□□□□ -0.5
SIN3B-206ENST00000595541 POLQO75417 2590 aa11.9□□□□□ -0.51
SIN3B-206ENST00000595541 NDUFA7O95182 113 aa11.9□□□□□ -0.51
SIN3B-206ENST00000595541 ATP5J2P56134 94 aa11.9□□□□□ -0.51
SIN3B-206ENST00000595541 CCL19Q99731 98 aa11.9□□□□□ -0.51
SIN3B-206ENST00000595541 DEFB136Q30KP8 78 aa11.89□□□□□ -0.51
SIN3B-206ENST00000595541 DEFB121Q5J5C9 76 aa11.89□□□□□ -0.51
SIN3B-206ENST00000595541 Q8N2B8 174 aa11.89□□□□□ -0.51
SIN3B-206ENST00000595541 SPANXA1Q9NS26 97 aa11.89□□□□□ -0.51
SIN3B-206ENST00000595541 C2CD3Q4AC94 2353 aa11.89□□□□□ -0.51
SIN3B-206ENST00000595541 CENPEQ02224 2701 aa11.89□□□□□ -0.51
SIN3B-206ENST00000595541 PPDPFQ9H3Y8 114 aa11.88□□□□□ -0.51
SIN3B-206ENST00000595541 USP9XQ93008 2570 aaPredicted RBP11.88□□□□□ -0.51
SIN3B-206ENST00000595541 SOSTDC1Q6X4U4 206 aa11.88□□□□□ -0.51
SIN3B-206ENST00000595541 HIST2H2BDQ6DRA6 164 aa11.87□□□□□ -0.51
SIN3B-206ENST00000595541 NRGNQ92686 78 aa11.87□□□□□ -0.51
SIN3B-206ENST00000595541 CHCHD5Q9BSY4 110 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms