RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 FA2HQ7L5A8 372 aa7.47□□□□□ -1.21
USE1-204ENST00000594399 PRSS3P2Q8NHM4 247 aa7.47□□□□□ -1.21
USE1-204ENST00000594399 DEFB104AQ8WTQ1 72 aa7.47□□□□□ -1.21
USE1-204ENST00000594399 MRPS16Q9Y3D3 137 aaKnown RBP7.47□□□□□ -1.21
USE1-204ENST00000594399 K7EMI3 77 aa7.46□□□□□ -1.22
USE1-204ENST00000594399 HIST1H2BKO60814 126 aa7.46□□□□□ -1.22
USE1-204ENST00000594399 HIST1H2BJP06899 126 aa7.46□□□□□ -1.22
USE1-204ENST00000594399 HIST1H2BOP23527 126 aa7.46□□□□□ -1.22
USE1-204ENST00000594399 HIST1H2BBP33778 126 aa7.46□□□□□ -1.22
USE1-204ENST00000594399 HIST1H2BDP58876 126 aa7.46□□□□□ -1.22
USE1-204ENST00000594399 HIST1H2BCP62807 126 aa7.46□□□□□ -1.22
USE1-204ENST00000594399 Q0VG73 95 aa7.46□□□□□ -1.22
USE1-204ENST00000594399 HIST2H2BEQ16778 126 aa7.46□□□□□ -1.22
USE1-204ENST00000594399 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.46□□□□□ -1.22
USE1-204ENST00000594399 UBE2DNLQ8IWF7 75 aa7.46□□□□□ -1.22
USE1-204ENST00000594399 HIST1H2BHQ93079 126 aa7.46□□□□□ -1.22
USE1-204ENST00000594399 HIST1H2BNQ99877 126 aa7.46□□□□□ -1.22
USE1-204ENST00000594399 HIST1H2BMQ99879 126 aa7.46□□□□□ -1.22
USE1-204ENST00000594399 TMEM243Q9BU79 118 aa7.46□□□□□ -1.22
USE1-204ENST00000594399 LINC00588Q9Y4M8 146 aa7.46□□□□□ -1.22
USE1-204ENST00000594399 TRAV8-6A0A0B4J262 113 aa7.45□□□□□ -1.22
USE1-204ENST00000594399 RAB5BP61020 215 aa7.45□□□□□ -1.22
USE1-204ENST00000594399 ORMDL2Q53FV1 153 aa7.45□□□□□ -1.22
USE1-204ENST00000594399 RNASEKQ6P5S7 137 aaKnown RBP7.45□□□□□ -1.22
USE1-204ENST00000594399 BAGE3Q86Y29 109 aa7.45□□□□□ -1.22
USE1-204ENST00000594399 CHCHD5Q9BSY4 110 aa7.45□□□□□ -1.22
USE1-204ENST00000594399 ALMS1Q8TCU4 4167 aa7.44□□□□□ -1.22
USE1-204ENST00000594399 LINC01546A6NGU7 62 aa7.44□□□□□ -1.22
USE1-204ENST00000594399 UBE2L6O14933 153 aa7.44□□□□□ -1.22
USE1-204ENST00000594399 LINC00614P0C842 121 aa7.44□□□□□ -1.22
USE1-204ENST00000594399 LAGE3Q14657 143 aa7.44□□□□□ -1.22
USE1-204ENST00000594399 NIT1Q86X76 327 aa7.44□□□□□ -1.22
USE1-204ENST00000594399 CHCHD1Q96BP2 118 aaKnown RBP7.44□□□□□ -1.22
USE1-204ENST00000594399 UPK3BQ9BT76 320 aa7.44□□□□□ -1.22
USE1-204ENST00000594399 CHCHD7Q9BUK0 85 aa7.44□□□□□ -1.22
USE1-204ENST00000594399 AP5S1Q9NUS5 200 aa7.44□□□□□ -1.22
USE1-204ENST00000594399 LYSTQ99698 3801 aa7.44□□□□□ -1.22
USE1-204ENST00000594399 ESDP10768 282 aa7.43□□□□□ -1.22
USE1-204ENST00000594399 PKIAP61925 76 aa7.43□□□□□ -1.22
USE1-204ENST00000594399 WFDC10BQ8IUB3 73 aa7.43□□□□□ -1.22
USE1-204ENST00000594399 URB1-AS1Q96HZ7 61 aa7.43□□□□□ -1.22
USE1-204ENST00000594399 RYR2Q92736 4967 aa7.42□□□□□ -1.22
USE1-204ENST00000594399 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.42□□□□□ -1.22
USE1-204ENST00000594399 IGKV2-29A2NJV5 120 aaPredicted RBP7.42□□□□□ -1.22
USE1-204ENST00000594399 H7C423 109 aa7.42□□□□□ -1.22
USE1-204ENST00000594399 SERF1AO75920 110 aa7.42□□□□□ -1.22
USE1-204ENST00000594399 GAGE6Q13070 117 aa7.42□□□□□ -1.22
USE1-204ENST00000594399 LGALS9CQ6DKI2 356 aa7.42□□□□□ -1.22
USE1-204ENST00000594399 C20orf203Q8NBC4 194 aa7.42□□□□□ -1.22
USE1-204ENST00000594399 TMEM18Q96B42 140 aa7.42□□□□□ -1.22
USE1-204ENST00000594399 HSBP1O75506 76 aa7.41□□□□□ -1.22
USE1-204ENST00000594399 BTF3P20290 206 aaKnown RBP7.41□□□□□ -1.22
USE1-204ENST00000594399 G0S2P27469 103 aa7.41□□□□□ -1.22
USE1-204ENST00000594399 C2orf66Q6UXQ4 117 aa7.41□□□□□ -1.22
USE1-204ENST00000594399 LINC00476Q8WZB0 136 aa7.41□□□□□ -1.22
USE1-204ENST00000594399 CYSLTR1Q9Y271 337 aa7.41□□□□□ -1.22
USE1-204ENST00000594399 A0A087WX48 190 aa7.4□□□□□ -1.22
USE1-204ENST00000594399 TMEM262E9PQX1 116 aa7.4□□□□□ -1.22
USE1-204ENST00000594399 SIVA1O15304 175 aa7.4□□□□□ -1.22
USE1-204ENST00000594399 HBDP02042 147 aa7.4□□□□□ -1.22
USE1-204ENST00000594399 FGF6P10767 208 aa7.4□□□□□ -1.22
USE1-204ENST00000594399 LINC00310P59036 64 aa7.4□□□□□ -1.22
USE1-204ENST00000594399 RPL39P62891 51 aaKnown RBP7.4□□□□□ -1.22
USE1-204ENST00000594399 SMAGPQ0VAQ4 97 aa7.4□□□□□ -1.22
USE1-204ENST00000594399 MPV17L2Q567V2 206 aa7.4□□□□□ -1.22
USE1-204ENST00000594399 LINC01549A6NIU2 74 aa7.39□□□□□ -1.23
USE1-204ENST00000594399 DNAH10OSP0CZ25 163 aa7.39□□□□□ -1.23
USE1-204ENST00000594399 ZNF25P17030 456 aaPredicted RBP7.39□□□□□ -1.23
USE1-204ENST00000594399 NDUFA6P56556 154 aa7.39□□□□□ -1.23
USE1-204ENST00000594399 PMCHL1Q16048 86 aa7.39□□□□□ -1.23
USE1-204ENST00000594399 LINC01556Q5JQF7 62 aa7.39□□□□□ -1.23
USE1-204ENST00000594399 COA6Q5JTJ3 125 aaKnown RBP7.39□□□□□ -1.23
USE1-204ENST00000594399 AMMECR1LQ6DCA0 310 aa7.39□□□□□ -1.23
USE1-204ENST00000594399 MRPL52Q86TS9 123 aaKnown RBP7.39□□□□□ -1.23
USE1-204ENST00000594399 TOMM6Q96B49 74 aa7.39□□□□□ -1.23
USE1-204ENST00000594399 Q9H8V8 135 aa7.39□□□□□ -1.23
USE1-204ENST00000594399 SPANXA1Q9NS26 97 aa7.39□□□□□ -1.23
USE1-204ENST00000594399 UBE2D4Q9Y2X8 147 aa7.39□□□□□ -1.23
USE1-204ENST00000594399 SACSQ9NZJ4 4579 aa7.39□□□□□ -1.23
USE1-204ENST00000594399 VPS13DQ5THJ4 4388 aa7.38□□□□□ -1.23
USE1-204ENST00000594399 DNAH1Q9P2D7 4330 aa7.38□□□□□ -1.23
USE1-204ENST00000594399 A0A096LNJ9 63 aa7.38□□□□□ -1.23
USE1-204ENST00000594399 LY6G6CO95867 125 aa7.38□□□□□ -1.23
USE1-204ENST00000594399 IGHV3-30P01768 117 aa7.38□□□□□ -1.23
USE1-204ENST00000594399 IGHV3-33P01772 117 aa7.38□□□□□ -1.23
USE1-204ENST00000594399 S100A6P06703 90 aa7.38□□□□□ -1.23
USE1-204ENST00000594399 IGHV3-30-3P0DP02 117 aa7.38□□□□□ -1.23
USE1-204ENST00000594399 IGHV3-30-5P0DP03 117 aa7.38□□□□□ -1.23
USE1-204ENST00000594399 RBX1P62877 108 aa7.38□□□□□ -1.23
USE1-204ENST00000594399 Q8N3U1 123 aa7.38□□□□□ -1.23
USE1-204ENST00000594399 OR5A1Q8NGJ0 315 aa7.38□□□□□ -1.23
USE1-204ENST00000594399 TMEM101Q96IK0 257 aa7.38□□□□□ -1.23
USE1-204ENST00000594399 TIMM21Q9BVV7 248 aa7.38□□□□□ -1.23
USE1-204ENST00000594399 A0A1B0GUV1 79 aa7.37□□□□□ -1.23
USE1-204ENST00000594399 DGAT2L7PQ6IED9 249 aa7.37□□□□□ -1.23
USE1-204ENST00000594399 Q8N976 141 aa7.37□□□□□ -1.23
USE1-204ENST00000594399 CSDC2Q9Y534 153 aaKnown RBP7.37□□□□□ -1.23
USE1-204ENST00000594399 DNAH6Q9C0G6 4158 aa7.37□□□□□ -1.23
USE1-204ENST00000594399 IGLV4-60A0A075B6I1 120 aa7.36□□□□□ -1.23
USE1-204ENST00000594399 K7EP13 123 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms