RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 RGS21Q2M5E4 152 aa10.03□□□□□ -0.8
GTF2F1-203ENST00000594213 LYZL1Q6UWQ5 148 aa10.03□□□□□ -0.8
GTF2F1-203ENST00000594213 SMIM12Q96EX1 92 aa10.03□□□□□ -0.8
GTF2F1-203ENST00000594213 DPH3Q96FX2 82 aa10.03□□□□□ -0.8
GTF2F1-203ENST00000594213 GNG13Q9P2W3 67 aa10.03□□□□□ -0.8
GTF2F1-203ENST00000594213 TRBV20OR9-2A0A075B6H5 130 aa10.02□□□□□ -0.81
GTF2F1-203ENST00000594213 TRGC1P0CF51 173 aa10.02□□□□□ -0.81
GTF2F1-203ENST00000594213 NTF3P20783 257 aa10.02□□□□□ -0.81
GTF2F1-203ENST00000594213 WDR73Q6P4I2 378 aa10.02□□□□□ -0.81
GTF2F1-203ENST00000594213 C9orf62Q8N4C0 152 aa10.02□□□□□ -0.81
GTF2F1-203ENST00000594213 DPH3P1Q9H4G8 78 aa10.02□□□□□ -0.81
GTF2F1-203ENST00000594213 KANTRA0A1W2PQU2 76 aa10.01□□□□□ -0.81
GTF2F1-203ENST00000594213 GAGE12HA6NDE8 117 aa10.01□□□□□ -0.81
GTF2F1-203ENST00000594213 PHOX2AO14813 284 aa10.01□□□□□ -0.81
GTF2F1-203ENST00000594213 COTL1Q14019 142 aa10.01□□□□□ -0.81
GTF2F1-203ENST00000594213 CNFNQ9BYD5 112 aa10.01□□□□□ -0.81
GTF2F1-203ENST00000594213 RNF213Q63HN8 5207 aa10□□□□□ -0.81
GTF2F1-203ENST00000594213 XKRY2A2RUG3 117 aa10□□□□□ -0.81
GTF2F1-203ENST00000594213 IFNA1P01562 189 aa10□□□□□ -0.81
GTF2F1-203ENST00000594213 RPS10P46783 165 aaKnown RBP10□□□□□ -0.81
GTF2F1-203ENST00000594213 AMTP48728 403 aa10□□□□□ -0.81
GTF2F1-203ENST00000594213 EIF5AP63241 154 aaKnown RBP10□□□□□ -0.81
GTF2F1-203ENST00000594213 COX6A2Q02221 97 aa10□□□□□ -0.81
GTF2F1-203ENST00000594213 CFAP161Q6P656 301 aa10□□□□□ -0.81
GTF2F1-203ENST00000594213 PRSS3P2Q8NHM4 247 aa10□□□□□ -0.81
GTF2F1-203ENST00000594213 CTRLP40313 264 aa9.99□□□□□ -0.81
GTF2F1-203ENST00000594213 GNG4P50150 75 aa9.99□□□□□ -0.81
GTF2F1-203ENST00000594213 SULT1A2P50226 295 aa9.99□□□□□ -0.81
GTF2F1-203ENST00000594213 GATD1Q8NB37 220 aa9.99□□□□□ -0.81
GTF2F1-203ENST00000594213 UBE2L6O14933 153 aa9.98□□□□□ -0.81
GTF2F1-203ENST00000594213 NUDT10Q8NFP7 164 aa9.98□□□□□ -0.81
GTF2F1-203ENST00000594213 NUDT11Q96G61 164 aa9.98□□□□□ -0.81
GTF2F1-203ENST00000594213 LINC01600Q96MT4 127 aa9.98□□□□□ -0.81
GTF2F1-203ENST00000594213 NDUFS6O75380 124 aaKnown RBP9.97□□□□□ -0.81
GTF2F1-203ENST00000594213 MEF2BQ02080 365 aaPredicted RBP9.97□□□□□ -0.81
GTF2F1-203ENST00000594213 C7orf33Q8WU49 177 aa9.97□□□□□ -0.81
GTF2F1-203ENST00000594213 CHCHD10Q8WYQ3 142 aaPredicted RBP9.97□□□□□ -0.81
GTF2F1-203ENST00000594213 GVQW2A0A096LPI5 108 aaPredicted RBP9.96□□□□□ -0.82
GTF2F1-203ENST00000594213 PDE6DO43924 150 aa9.96□□□□□ -0.82
GTF2F1-203ENST00000594213 HIGD2BQ4VC39 106 aa9.96□□□□□ -0.82
GTF2F1-203ENST00000594213 Q6ZNX1 250 aa9.96□□□□□ -0.82
GTF2F1-203ENST00000594213 BIN3Q9NQY0 253 aa9.96□□□□□ -0.82
GTF2F1-203ENST00000594213 MED9Q9NWA0 146 aa9.96□□□□□ -0.82
GTF2F1-203ENST00000594213 TRAV26-2A0A0B4J265 109 aa9.95□□□□□ -0.82
GTF2F1-203ENST00000594213 PRR3P79522 188 aaKnown RBP9.95□□□□□ -0.82
GTF2F1-203ENST00000594213 MAJINQ3KP22 176 aa9.95□□□□□ -0.82
GTF2F1-203ENST00000594213 IGKV3OR2-268A0A0C4DH90 116 aa9.94□□□□□ -0.82
GTF2F1-203ENST00000594213 H7C423 109 aa9.94□□□□□ -0.82
GTF2F1-203ENST00000594213 NCR2O95944 276 aa9.94□□□□□ -0.82
GTF2F1-203ENST00000594213 FOXI1Q12951 378 aa9.94□□□□□ -0.82
GTF2F1-203ENST00000594213 TWIST1Q15672 202 aa9.94□□□□□ -0.82
GTF2F1-203ENST00000594213 RPL39LQ96EH5 51 aaKnown RBP9.94□□□□□ -0.82
GTF2F1-203ENST00000594213 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.93□□□□□ -0.82
GTF2F1-203ENST00000594213 IGKV2-24A0A0C4DH68 120 aa9.93□□□□□ -0.82
GTF2F1-203ENST00000594213 IGKV2-29A2NJV5 120 aaPredicted RBP9.93□□□□□ -0.82
GTF2F1-203ENST00000594213 BCL2P10415 239 aa9.93□□□□□ -0.82
GTF2F1-203ENST00000594213 FOXA3P55318 350 aaPredicted RBP9.93□□□□□ -0.82
GTF2F1-203ENST00000594213 STPG4Q8N801 248 aa9.93□□□□□ -0.82
GTF2F1-203ENST00000594213 GTSF1Q8WW33 167 aa9.93□□□□□ -0.82
GTF2F1-203ENST00000594213 A0A096LNI7 61 aa9.92□□□□□ -0.82
GTF2F1-203ENST00000594213 FAM231BA6NCW3 169 aa9.92□□□□□ -0.82
GTF2F1-203ENST00000594213 TEX46H3BTG2 121 aa9.92□□□□□ -0.82
GTF2F1-203ENST00000594213 K7EN84 100 aa9.92□□□□□ -0.82
GTF2F1-203ENST00000594213 FGF6P10767 208 aa9.92□□□□□ -0.82
GTF2F1-203ENST00000594213 KRTAP10-8P60410 259 aa9.92□□□□□ -0.82
GTF2F1-203ENST00000594213 ODF1Q14990 250 aa9.92□□□□□ -0.82
GTF2F1-203ENST00000594213 RPP21Q9H633 154 aaKnown RBP9.92□□□□□ -0.82
GTF2F1-203ENST00000594213 AMMECR1LQ6DCA0 310 aa9.91□□□□□ -0.82
GTF2F1-203ENST00000594213 EIF5AL1Q6IS14 154 aaKnown RBP9.91□□□□□ -0.82
GTF2F1-203ENST00000594213 OCC1Q8TAD7 63 aa9.91□□□□□ -0.82
GTF2F1-203ENST00000594213 RNASE7Q9H1E1 156 aaKnown RBP9.91□□□□□ -0.82
GTF2F1-203ENST00000594213 A0A0J9YXV3 536 aa9.9□□□□□ -0.82
GTF2F1-203ENST00000594213 SDHAF1A6NFY7 115 aa9.9□□□□□ -0.82
GTF2F1-203ENST00000594213 SRSF9Q13242 221 aaKnown RBP eCLIP9.9□□□□□ -0.82
GTF2F1-203ENST00000594213 RNASEKQ6P5S7 137 aaKnown RBP9.9□□□□□ -0.82
GTF2F1-203ENST00000594213 OR5A1Q8NGJ0 315 aa9.9□□□□□ -0.82
GTF2F1-203ENST00000594213 LYPD6BQ8NI32 183 aa9.9□□□□□ -0.82
GTF2F1-203ENST00000594213 TRBV6-5A0A0K0K1A5 114 aa9.89□□□□□ -0.83
GTF2F1-203ENST00000594213 APCSP02743 223 aa9.89□□□□□ -0.83
GTF2F1-203ENST00000594213 ESDP10768 282 aa9.89□□□□□ -0.83
GTF2F1-203ENST00000594213 ZNF25P17030 456 aaPredicted RBP9.89□□□□□ -0.83
GTF2F1-203ENST00000594213 LINC00959A0A1B0GUT2 108 aa9.88□□□□□ -0.83
GTF2F1-203ENST00000594213 TEX261Q6UWH6 196 aa9.88□□□□□ -0.83
GTF2F1-203ENST00000594213 SPINK6Q6UWN8 80 aa9.88□□□□□ -0.83
GTF2F1-203ENST00000594213 LINC00474Q9P2X8 69 aa9.88□□□□□ -0.83
GTF2F1-203ENST00000594213 IGHV1-58A0A0C4DH39 117 aa9.87□□□□□ -0.83
GTF2F1-203ENST00000594213 TAGLN2P37802 199 aaKnown RBP9.87□□□□□ -0.83
GTF2F1-203ENST00000594213 XCL1P47992 114 aa9.87□□□□□ -0.83
GTF2F1-203ENST00000594213 LINC00526Q96FQ7 95 aa9.87□□□□□ -0.83
GTF2F1-203ENST00000594213 I3L3M4 83 aa9.86□□□□□ -0.83
GTF2F1-203ENST00000594213 CCL25O15444 150 aa9.86□□□□□ -0.83
GTF2F1-203ENST00000594213 GAS8-AS1O95177 125 aa9.86□□□□□ -0.83
GTF2F1-203ENST00000594213 TSHBP01222 138 aa9.86□□□□□ -0.83
GTF2F1-203ENST00000594213 SMIM15Q7Z3B0 74 aa9.86□□□□□ -0.83
GTF2F1-203ENST00000594213 PMCHP20382 165 aa9.85□□□□□ -0.83
GTF2F1-203ENST00000594213 POLR2KP53803 58 aaKnown RBP9.84□□□□□ -0.83
GTF2F1-203ENST00000594213 FAM231DQ6ZW35 169 aa9.84□□□□□ -0.83
GTF2F1-203ENST00000594213 MRPL52Q86TS9 123 aaKnown RBP9.84□□□□□ -0.83
GTF2F1-203ENST00000594213 CARD19Q96LW7 228 aa9.84□□□□□ -0.83
GTF2F1-203ENST00000594213 FAM210AQ96ND0 272 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms