RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 LGALS9CQ6DKI2 356 aa10.72□□□□□ -0.69
VRK3-207ENST00000594092 SCGB3A1Q96QR1 104 aa10.72□□□□□ -0.69
VRK3-207ENST00000594092 C11orf68Q9H3H3 251 aaKnown RBP10.72□□□□□ -0.69
VRK3-207ENST00000594092 PAM16Q9Y3D7 125 aa10.72□□□□□ -0.69
VRK3-207ENST00000594092 TRBV6-4A0A1B0GX49 114 aa10.72□□□□□ -0.69
VRK3-207ENST00000594092 TSHBP01222 138 aa10.72□□□□□ -0.69
VRK3-207ENST00000594092 PRSS1P07477 247 aa10.72□□□□□ -0.69
VRK3-207ENST00000594092 DEFB104AQ8WTQ1 72 aa10.72□□□□□ -0.69
VRK3-207ENST00000594092 PRO1933Q9H354 126 aa10.71□□□□□ -0.69
VRK3-207ENST00000594092 TEX48A0A1B0GUV7 120 aa10.7□□□□□ -0.7
VRK3-207ENST00000594092 RPL36AP83881 106 aaKnown RBP10.7□□□□□ -0.7
VRK3-207ENST00000594092 Q6ZN92 141 aa10.7□□□□□ -0.7
VRK3-207ENST00000594092 RPL36ALQ969Q0 106 aaKnown RBP10.7□□□□□ -0.7
VRK3-207ENST00000594092 PMCHL2Q9BQD1 86 aa10.7□□□□□ -0.7
VRK3-207ENST00000594092 TRBV7-3A0A075B6L6 115 aa10.7□□□□□ -0.7
VRK3-207ENST00000594092 TRAV9-2A0A087WT02 112 aa10.7□□□□□ -0.7
VRK3-207ENST00000594092 ERASQ7Z444 233 aa10.7□□□□□ -0.7
VRK3-207ENST00000594092 ZNRF2Q8NHG8 242 aa10.7□□□□□ -0.7
VRK3-207ENST00000594092 SPATA45Q537H7 98 aa10.69□□□□□ -0.7
VRK3-207ENST00000594092 HHLA3Q9XRX5 114 aa10.69□□□□□ -0.7
VRK3-207ENST00000594092 HUWE1Q7Z6Z7 4374 aaKnown RBP10.69□□□□□ -0.7
VRK3-207ENST00000594092 A0A0J9YWU9 116 aa10.68□□□□□ -0.7
VRK3-207ENST00000594092 LOC100131303A0A0U1RQF7 123 aa10.68□□□□□ -0.7
VRK3-207ENST00000594092 GAGE12JA6NER3 117 aa10.68□□□□□ -0.7
VRK3-207ENST00000594092 HSBP1L1C9JCN9 74 aa10.68□□□□□ -0.7
VRK3-207ENST00000594092 ATP5G1P05496 136 aa10.68□□□□□ -0.7
VRK3-207ENST00000594092 RPL39P62891 51 aaKnown RBP10.68□□□□□ -0.7
VRK3-207ENST00000594092 GAGE1Q13065 139 aa10.68□□□□□ -0.7
VRK3-207ENST00000594092 GAGE4Q13068 117 aa10.68□□□□□ -0.7
VRK3-207ENST00000594092 GAGE5Q13069 117 aa10.68□□□□□ -0.7
VRK3-207ENST00000594092 C12orf74Q32Q52 190 aa10.68□□□□□ -0.7
VRK3-207ENST00000594092 GAGE13Q4V321 117 aa10.68□□□□□ -0.7
VRK3-207ENST00000594092 C20orf203Q8NBC4 194 aa10.68□□□□□ -0.7
VRK3-207ENST00000594092 PHLDA1Q8WV24 401 aaPredicted RBP10.68□□□□□ -0.7
VRK3-207ENST00000594092 PRADC1Q9BSG0 188 aa10.68□□□□□ -0.7
VRK3-207ENST00000594092 CRYBA4P53673 196 aa10.67□□□□□ -0.7
VRK3-207ENST00000594092 UBE2D3P61077 147 aa10.67□□□□□ -0.7
VRK3-207ENST00000594092 UBE2D2P62837 147 aa10.67□□□□□ -0.7
VRK3-207ENST00000594092 COTL1Q14019 142 aa10.67□□□□□ -0.7
VRK3-207ENST00000594092 ODF1Q14990 250 aa10.67□□□□□ -0.7
VRK3-207ENST00000594092 MAJINQ3KP22 176 aa10.67□□□□□ -0.7
VRK3-207ENST00000594092 TMEM141Q96I45 108 aa10.67□□□□□ -0.7
VRK3-207ENST00000594092 TIMM17AQ99595 171 aa10.67□□□□□ -0.7
VRK3-207ENST00000594092 ZMAT4Q9H898 229 aa10.67□□□□□ -0.7
VRK3-207ENST00000594092 PRO0255Q9UI72 69 aa10.67□□□□□ -0.7
VRK3-207ENST00000594092 TRAV12-1A0A0B4J245 112 aa10.66□□□□□ -0.7
VRK3-207ENST00000594092 IGHV3-38A0A0C4DH36 116 aa10.66□□□□□ -0.7
VRK3-207ENST00000594092 DAZ4Q86SG3 579 aaKnown RBP10.66□□□□□ -0.7
VRK3-207ENST00000594092 DAZ3Q9NR90 486 aaKnown RBP10.66□□□□□ -0.7
VRK3-207ENST00000594092 A0A087WX48 190 aa10.65□□□□□ -0.7
VRK3-207ENST00000594092 IGIPA6NJ69 53 aa10.65□□□□□ -0.7
VRK3-207ENST00000594092 DEFA6Q01524 100 aa10.65□□□□□ -0.7
VRK3-207ENST00000594092 BAALCQ8WXS3 180 aa10.65□□□□□ -0.7
VRK3-207ENST00000594092 hDV102S1A0JD36 115 aa10.65□□□□□ -0.71
VRK3-207ENST00000594092 DNAH9Q9NYC9 4486 aa10.64□□□□□ -0.71
VRK3-207ENST00000594092 F5H768 121 aa10.64□□□□□ -0.71
VRK3-207ENST00000594092 LINC00694P0DN24 101 aa10.64□□□□□ -0.71
VRK3-207ENST00000594092 HTN3P15516 51 aa10.64□□□□□ -0.71
VRK3-207ENST00000594092 B9D2Q9BPU9 175 aa10.64□□□□□ -0.71
VRK3-207ENST00000594092 PAX4O43316 350 aa10.63□□□□□ -0.71
VRK3-207ENST00000594092 GYPEP15421 78 aa10.63□□□□□ -0.71
VRK3-207ENST00000594092 VSIG2Q96IQ7 327 aa10.63□□□□□ -0.71
VRK3-207ENST00000594092 CHCHD7Q9BUK0 85 aa10.63□□□□□ -0.71
VRK3-207ENST00000594092 DPM2O94777 84 aa10.63□□□□□ -0.71
VRK3-207ENST00000594092 IGKCP01834 107 aa10.63□□□□□ -0.71
VRK3-207ENST00000594092 DDTP30046 118 aa10.63□□□□□ -0.71
VRK3-207ENST00000594092 A0A0J9YY99 117 aa10.62□□□□□ -0.71
VRK3-207ENST00000594092 Q6ZTC4 211 aa10.62□□□□□ -0.71
VRK3-207ENST00000594092 LINC00469Q8N7U9 141 aa10.62□□□□□ -0.71
VRK3-207ENST00000594092 C11orf45Q8TAV5 145 aa10.62□□□□□ -0.71
VRK3-207ENST00000594092 MRPL35Q9NZE8 188 aaKnown RBP10.62□□□□□ -0.71
VRK3-207ENST00000594092 CHTOPQ9Y3Y2 248 aaKnown RBP10.62□□□□□ -0.71
VRK3-207ENST00000594092 TRAV26-1A0A087WT03 109 aa10.61□□□□□ -0.71
VRK3-207ENST00000594092 F8VRH5 84 aa10.61□□□□□ -0.71
VRK3-207ENST00000594092 NANOS2P60321 138 aaKnown RBP10.61□□□□□ -0.71
VRK3-207ENST00000594092 PYGO1Q9Y3Y4 419 aa10.61□□□□□ -0.71
VRK3-207ENST00000594092 PRSS29PA6NIE9 313 aa10.61□□□□□ -0.71
VRK3-207ENST00000594092 PLNP26678 52 aa10.61□□□□□ -0.71
VRK3-207ENST00000594092 PMVKQ15126 192 aa10.61□□□□□ -0.71
VRK3-207ENST00000594092 NTM-AS1Q6ZSK4 140 aa10.61□□□□□ -0.71
VRK3-207ENST00000594092 MIEN1Q9BRT3 115 aa10.61□□□□□ -0.71
VRK3-207ENST00000594092 IGLC3P0DOY3 106 aa10.6□□□□□ -0.71
VRK3-207ENST00000594092 PAPPA-AS1Q5QFB9 102 aa10.6□□□□□ -0.71
VRK3-207ENST00000594092 SPANXA1Q9NS26 97 aa10.6□□□□□ -0.71
VRK3-207ENST00000594092 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.59□□□□□ -0.71
VRK3-207ENST00000594092 IGKV2-29A2NJV5 120 aaPredicted RBP10.59□□□□□ -0.71
VRK3-207ENST00000594092 NPSP0C0P6 89 aa10.59□□□□□ -0.71
VRK3-207ENST00000594092 GTSF1LQ9H1H1 148 aa10.59□□□□□ -0.71
VRK3-207ENST00000594092 UQCR10Q9UDW1 63 aa10.59□□□□□ -0.71
VRK3-207ENST00000594092 LBHQ53QV2 105 aaPredicted RBP10.58□□□□□ -0.72
VRK3-207ENST00000594092 CST9LQ9H4G1 147 aa10.58□□□□□ -0.72
VRK3-207ENST00000594092 MEGF8Q7Z7M0 2845 aa10.58□□□□□ -0.72
VRK3-207ENST00000594092 IGLV4-3A0A075B6K6 122 aa10.58□□□□□ -0.72
VRK3-207ENST00000594092 STPG4Q8N801 248 aa10.58□□□□□ -0.72
VRK3-207ENST00000594092 ATP6V0E2Q8NHE4 81 aa10.58□□□□□ -0.72
VRK3-207ENST00000594092 C14orf144Q96I85 54 aa10.58□□□□□ -0.72
VRK3-207ENST00000594092 UBE2D4Q9Y2X8 147 aa10.58□□□□□ -0.72
VRK3-207ENST00000594092 COL7A1Q02388 2944 aa10.57□□□□□ -0.72
VRK3-207ENST00000594092 OPRPNQ99935 248 aaPredicted RBP10.57□□□□□ -0.72
VRK3-207ENST00000594092 VCX2Q9H322 139 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms