RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 GATD1Q8NB37 220 aa6.7□□□□□ -1.34
USE1-203ENST00000593597 PRSS3P2Q8NHM4 247 aa6.7□□□□□ -1.34
USE1-203ENST00000593597 MANBALQ9NQG1 85 aa6.7□□□□□ -1.34
USE1-203ENST00000593597 NIT2Q9NQR4 276 aa6.7□□□□□ -1.34
USE1-203ENST00000593597 TRAV1-1A0A0B4J248 108 aa6.69□□□□□ -1.34
USE1-203ENST00000593597 TRAV26-2A0A0B4J265 109 aa6.69□□□□□ -1.34
USE1-203ENST00000593597 H7C1H1 209 aa6.69□□□□□ -1.34
USE1-203ENST00000593597 NTF3P20783 257 aa6.69□□□□□ -1.34
USE1-203ENST00000593597 CTRLP40313 264 aa6.69□□□□□ -1.34
USE1-203ENST00000593597 AMTP48728 403 aa6.69□□□□□ -1.34
USE1-203ENST00000593597 RPS20P60866 119 aaKnown RBP6.69□□□□□ -1.34
USE1-203ENST00000593597 COX6A2Q02221 97 aa6.69□□□□□ -1.34
USE1-203ENST00000593597 Q6ZNX1 250 aa6.69□□□□□ -1.34
USE1-203ENST00000593597 RPL39LQ96EH5 51 aaKnown RBP6.69□□□□□ -1.34
USE1-203ENST00000593597 RNF185Q96GF1 192 aa6.69□□□□□ -1.34
USE1-203ENST00000593597 DPH3P1Q9H4G8 78 aa6.69□□□□□ -1.34
USE1-203ENST00000593597 KANTRA0A1W2PQU2 76 aa6.68□□□□□ -1.34
USE1-203ENST00000593597 K7EN84 100 aa6.68□□□□□ -1.34
USE1-203ENST00000593597 FOXA3P55318 350 aaPredicted RBP6.68□□□□□ -1.34
USE1-203ENST00000593597 CNFNQ9BYD5 112 aa6.68□□□□□ -1.34
USE1-203ENST00000593597 LPAP08519 4548 aa6.68□□□□□ -1.34
USE1-203ENST00000593597 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.67□□□□□ -1.34
USE1-203ENST00000593597 A0A096LNI7 61 aa6.67□□□□□ -1.34
USE1-203ENST00000593597 IGKV3OR2-268A0A0C4DH90 116 aa6.67□□□□□ -1.34
USE1-203ENST00000593597 IGKV2-29A2NJV5 120 aaPredicted RBP6.67□□□□□ -1.34
USE1-203ENST00000593597 TRGC1P0CF51 173 aa6.67□□□□□ -1.34
USE1-203ENST00000593597 GNG4P50150 75 aa6.67□□□□□ -1.34
USE1-203ENST00000593597 PRR3P79522 188 aaKnown RBP6.67□□□□□ -1.34
USE1-203ENST00000593597 MEF2BQ02080 365 aaPredicted RBP6.67□□□□□ -1.34
USE1-203ENST00000593597 COTL1Q14019 142 aa6.67□□□□□ -1.34
USE1-203ENST00000593597 C9orf62Q8N4C0 152 aa6.67□□□□□ -1.34
USE1-203ENST00000593597 NUDT10Q8NFP7 164 aa6.67□□□□□ -1.34
USE1-203ENST00000593597 SMIM12Q96EX1 92 aa6.67□□□□□ -1.34
USE1-203ENST00000593597 NUDT11Q96G61 164 aa6.67□□□□□ -1.34
USE1-203ENST00000593597 AP5S1Q9NUS5 200 aa6.67□□□□□ -1.34
USE1-203ENST00000593597 GVQW2A0A096LPI5 108 aaPredicted RBP6.66□□□□□ -1.34
USE1-203ENST00000593597 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.66□□□□□ -1.34
USE1-203ENST00000593597 IGKV2-24A0A0C4DH68 120 aa6.66□□□□□ -1.34
USE1-203ENST00000593597 F2Z2F3 143 aa6.66□□□□□ -1.34
USE1-203ENST00000593597 GAS8-AS1O95177 125 aa6.66□□□□□ -1.34
USE1-203ENST00000593597 IFNA1P01562 189 aa6.66□□□□□ -1.34
USE1-203ENST00000593597 SULT1A2P50226 295 aa6.66□□□□□ -1.34
USE1-203ENST00000593597 FOXI1Q12951 378 aa6.66□□□□□ -1.34
USE1-203ENST00000593597 GTSF1Q8WW33 167 aa6.66□□□□□ -1.34
USE1-203ENST00000593597 CHCHD10Q8WYQ3 142 aaPredicted RBP6.66□□□□□ -1.34
USE1-203ENST00000593597 RNASE7Q9H1E1 156 aaKnown RBP6.66□□□□□ -1.34
USE1-203ENST00000593597 UBE2L6O14933 153 aa6.65□□□□□ -1.34
USE1-203ENST00000593597 NDUFS6O75380 124 aaKnown RBP6.65□□□□□ -1.34
USE1-203ENST00000593597 BCL2P10415 239 aa6.65□□□□□ -1.34
USE1-203ENST00000593597 RPS10P46783 165 aaKnown RBP6.65□□□□□ -1.34
USE1-203ENST00000593597 MAJINQ3KP22 176 aa6.65□□□□□ -1.34
USE1-203ENST00000593597 WDR73Q6P4I2 378 aa6.65□□□□□ -1.34
USE1-203ENST00000593597 LINC01600Q96MT4 127 aa6.65□□□□□ -1.34
USE1-203ENST00000593597 FAM231BA6NCW3 169 aa6.64□□□□□ -1.35
USE1-203ENST00000593597 TWIST1Q15672 202 aa6.64□□□□□ -1.35
USE1-203ENST00000593597 STPG4Q8N801 248 aa6.64□□□□□ -1.35
USE1-203ENST00000593597 LINC00526Q96FQ7 95 aa6.64□□□□□ -1.35
USE1-203ENST00000593597 RPP21Q9H633 154 aaKnown RBP6.64□□□□□ -1.35
USE1-203ENST00000593597 MED9Q9NWA0 146 aa6.64□□□□□ -1.35
USE1-203ENST00000593597 XKRY2A2RUG3 117 aa6.63□□□□□ -1.35
USE1-203ENST00000593597 PDE6DO43924 150 aa6.63□□□□□ -1.35
USE1-203ENST00000593597 FGF6P10767 208 aa6.63□□□□□ -1.35
USE1-203ENST00000593597 KRTAP10-8P60410 259 aa6.63□□□□□ -1.35
USE1-203ENST00000593597 EIF5AP63241 154 aaKnown RBP6.63□□□□□ -1.35
USE1-203ENST00000593597 LYPD6BQ8NI32 183 aa6.63□□□□□ -1.35
USE1-203ENST00000593597 OCC1Q8TAD7 63 aa6.63□□□□□ -1.35
USE1-203ENST00000593597 C7orf33Q8WU49 177 aa6.63□□□□□ -1.35
USE1-203ENST00000593597 DPH3Q96FX2 82 aa6.63□□□□□ -1.35
USE1-203ENST00000593597 SDHAF1A6NFY7 115 aa6.62□□□□□ -1.35
USE1-203ENST00000593597 A0A0J9YXV3 536 aa6.61□□□□□ -1.35
USE1-203ENST00000593597 NCR2O95944 276 aa6.61□□□□□ -1.35
USE1-203ENST00000593597 TSHBP01222 138 aa6.61□□□□□ -1.35
USE1-203ENST00000593597 APCSP02743 223 aa6.61□□□□□ -1.35
USE1-203ENST00000593597 ESDP10768 282 aa6.61□□□□□ -1.35
USE1-203ENST00000593597 RNASEKQ6P5S7 137 aaKnown RBP6.61□□□□□ -1.35
USE1-203ENST00000593597 CFAP161Q6P656 301 aa6.61□□□□□ -1.35
USE1-203ENST00000593597 OR5A1Q8NGJ0 315 aa6.61□□□□□ -1.35
USE1-203ENST00000593597 LINC00959A0A1B0GUT2 108 aa6.6□□□□□ -1.35
USE1-203ENST00000593597 CCL25O15444 150 aa6.6□□□□□ -1.35
USE1-203ENST00000593597 XCL1P47992 114 aa6.6□□□□□ -1.35
USE1-203ENST00000593597 SRSF9Q13242 221 aaKnown RBP eCLIP6.6□□□□□ -1.35
USE1-203ENST00000593597 AMMECR1LQ6DCA0 310 aa6.6□□□□□ -1.35
USE1-203ENST00000593597 BIN3Q9NQY0 253 aa6.6□□□□□ -1.35
USE1-203ENST00000593597 TMEM242Q9NWH2 141 aa6.6□□□□□ -1.35
USE1-203ENST00000593597 TRBV6-5A0A0K0K1A5 114 aa6.59□□□□□ -1.35
USE1-203ENST00000593597 H7C423 109 aa6.59□□□□□ -1.35
USE1-203ENST00000593597 ZNF25P17030 456 aaPredicted RBP6.58□□□□□ -1.36
USE1-203ENST00000593597 CARD19Q96LW7 228 aa6.58□□□□□ -1.36
USE1-203ENST00000593597 IGHV1-58A0A0C4DH39 117 aa6.57□□□□□ -1.36
USE1-203ENST00000593597 A0A1W2PNN7 141 aa6.57□□□□□ -1.36
USE1-203ENST00000593597 TEX46H3BTG2 121 aa6.57□□□□□ -1.36
USE1-203ENST00000593597 I3L3M4 83 aa6.57□□□□□ -1.36
USE1-203ENST00000593597 POLR2KP53803 58 aaKnown RBP6.57□□□□□ -1.36
USE1-203ENST00000593597 SPINK6Q6UWN8 80 aa6.57□□□□□ -1.36
USE1-203ENST00000593597 FAM231DQ6ZW35 169 aa6.57□□□□□ -1.36
USE1-203ENST00000593597 MRPL52Q86TS9 123 aaKnown RBP6.57□□□□□ -1.36
USE1-203ENST00000593597 CDC42SE2Q9NRR3 84 aa6.57□□□□□ -1.36
USE1-203ENST00000593597 GATCO43716 136 aaKnown RBP6.56□□□□□ -1.36
USE1-203ENST00000593597 PMCHP20382 165 aa6.56□□□□□ -1.36
USE1-203ENST00000593597 PTTG1IPP53801 180 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms