RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 RNASE7Q9H1E1 156 aaKnown RBP15.08■□□□□ 0
MBD3-211ENST00000592965 TWIST1Q15672 202 aa15.07■□□□□ 0
MBD3-211ENST00000592965 TMEM250H0YL14 139 aa15.06■□□□□ 0
MBD3-211ENST00000592965 DEFB104AQ8WTQ1 72 aa15.06■□□□□ 0
MBD3-211ENST00000592965 TRAV8-4A0A0B4J246 113 aa15.05■□□□□ -0
MBD3-211ENST00000592965 KRTAP10-4P60372 401 aaPredicted RBP15.05■□□□□ -0
MBD3-211ENST00000592965 TEX261Q6UWH6 196 aa15.05■□□□□ -0
MBD3-211ENST00000592965 IGLV4-60A0A075B6I1 120 aa15.04■□□□□ -0
MBD3-211ENST00000592965 COTL1Q14019 142 aa15.04■□□□□ -0
MBD3-211ENST00000592965 C9orf163Q8N9P6 203 aa15.04■□□□□ -0
MBD3-211ENST00000592965 CLRN3Q8NCR9 226 aa15.04■□□□□ -0
MBD3-211ENST00000592965 GTSF1Q8WW33 167 aa15.04■□□□□ -0
MBD3-211ENST00000592965 FAM210AQ96ND0 272 aa15.04■□□□□ -0
MBD3-211ENST00000592965 IGLV10-54A0A075B6I4 117 aa15.03■□□□□ -0
MBD3-211ENST00000592965 AMTP48728 403 aa15.03■□□□□ -0
MBD3-211ENST00000592965 GATD1Q8NB37 220 aa15.03■□□□□ -0
MBD3-211ENST00000592965 GFRA4Q9GZZ7 299 aa15.03■□□□□ -0
MBD3-211ENST00000592965 J3QL48 77 aa15.02■□□□□ -0
MBD3-211ENST00000592965 UBE2L6O14933 153 aa15.02■□□□□ -0
MBD3-211ENST00000592965 KRTAP29-1A8MX34 341 aaPredicted RBP15.01□□□□□ -0.01
MBD3-211ENST00000592965 SRP19P09132 144 aaKnown RBP15.01□□□□□ -0.01
MBD3-211ENST00000592965 FAM231DQ6ZW35 169 aa15.01□□□□□ -0.01
MBD3-211ENST00000592965 EIF5A2Q9GZV4 153 aaKnown RBP15.01□□□□□ -0.01
MBD3-211ENST00000592965 LRP1Q07954 4544 aaKnown RBP15.01□□□□□ -0.01
MBD3-211ENST00000592965 PKHD1L1Q86WI1 4243 aa15□□□□□ -0.01
MBD3-211ENST00000592965 TRAV26-2A0A0B4J265 109 aa15□□□□□ -0.01
MBD3-211ENST00000592965 CEBPGP53567 150 aa15□□□□□ -0.01
MBD3-211ENST00000592965 SMIM15Q7Z3B0 74 aa15□□□□□ -0.01
MBD3-211ENST00000592965 GATCO43716 136 aaKnown RBP14.99□□□□□ -0.01
MBD3-211ENST00000592965 NDUFS6O75380 124 aaKnown RBP14.99□□□□□ -0.01
MBD3-211ENST00000592965 CNBPP62633 177 aaKnown RBP14.99□□□□□ -0.01
MBD3-211ENST00000592965 C9JQL5 133 aa14.98□□□□□ -0.01
MBD3-211ENST00000592965 FAT3Q8TDW7 4589 aa14.98□□□□□ -0.01
MBD3-211ENST00000592965 A8MWL6 223 aa14.97□□□□□ -0.01
MBD3-211ENST00000592965 NCR2O95944 276 aa14.97□□□□□ -0.01
MBD3-211ENST00000592965 CT83Q5H943 113 aa14.97□□□□□ -0.01
MBD3-211ENST00000592965 RPL39LQ96EH5 51 aaKnown RBP14.97□□□□□ -0.01
MBD3-211ENST00000592965 hDV102S1A0JD36 115 aa14.96□□□□□ -0.01
MBD3-211ENST00000592965 FOXA3P55318 350 aaPredicted RBP14.96□□□□□ -0.01
MBD3-211ENST00000592965 SRSF3P84103 164 aaKnown RBP14.96□□□□□ -0.01
MBD3-211ENST00000592965 SDIM1Q6ZPB5 146 aa14.96□□□□□ -0.01
MBD3-211ENST00000592965 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.96□□□□□ -0.01
MBD3-211ENST00000592965 SMIM7Q9BQ49 75 aa14.95□□□□□ -0.02
MBD3-211ENST00000592965 LINC01551Q86U37 167 aa14.93□□□□□ -0.02
MBD3-211ENST00000592965 AP5S1Q9NUS5 200 aa14.93□□□□□ -0.02
MBD3-211ENST00000592965 SDHAF1A6NFY7 115 aa14.92□□□□□ -0.02
MBD3-211ENST00000592965 ZNF727A8MUV8 499 aa14.92□□□□□ -0.02
MBD3-211ENST00000592965 H7C423 109 aa14.92□□□□□ -0.02
MBD3-211ENST00000592965 PANO1I0J062 215 aa14.92□□□□□ -0.02
MBD3-211ENST00000592965 APCSP02743 223 aa14.92□□□□□ -0.02
MBD3-211ENST00000592965 RPL37AP61513 92 aaKnown RBP14.92□□□□□ -0.02
MBD3-211ENST00000592965 CIRBPQ14011 172 aaKnown RBP14.91□□□□□ -0.02
MBD3-211ENST00000592965 AMMECR1LQ6DCA0 310 aa14.91□□□□□ -0.02
MBD3-211ENST00000592965 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.9□□□□□ -0.02
MBD3-211ENST00000592965 TRBV6-5A0A0K0K1A5 114 aa14.9□□□□□ -0.02
MBD3-211ENST00000592965 SLPIP03973 132 aa14.9□□□□□ -0.02
MBD3-211ENST00000592965 BORCS7Q96B45 105 aa14.9□□□□□ -0.02
MBD3-211ENST00000592965 IGHV3-64A0A075B6Q5 118 aa14.89□□□□□ -0.03
MBD3-211ENST00000592965 GAGE12HA6NDE8 117 aa14.89□□□□□ -0.03
MBD3-211ENST00000592965 C15orf56Q8N910 161 aa14.89□□□□□ -0.03
MBD3-211ENST00000592965 TSKUQ8WUA8 353 aa14.89□□□□□ -0.03
MBD3-211ENST00000592965 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.88□□□□□ -0.03
MBD3-211ENST00000592965 IGKV2-29A2NJV5 120 aaPredicted RBP14.88□□□□□ -0.03
MBD3-211ENST00000592965 FAM231BA6NCW3 169 aa14.88□□□□□ -0.03
MBD3-211ENST00000592965 I3L3M4 83 aa14.88□□□□□ -0.03
MBD3-211ENST00000592965 FGF6P10767 208 aa14.88□□□□□ -0.03
MBD3-211ENST00000592965 CFAP161Q6P656 301 aa14.88□□□□□ -0.03
MBD3-211ENST00000592965 IGKV3OR2-268A0A0C4DH90 116 aa14.87□□□□□ -0.03
MBD3-211ENST00000592965 A0A1B0GUT8 65 aa14.87□□□□□ -0.03
MBD3-211ENST00000592965 HIGD1CA8MV81 97 aa14.87□□□□□ -0.03
MBD3-211ENST00000592965 OXTP01178 125 aa14.87□□□□□ -0.03
MBD3-211ENST00000592965 ZNF25P17030 456 aaPredicted RBP14.87□□□□□ -0.03
MBD3-211ENST00000592965 RNASEKQ6P5S7 137 aaKnown RBP14.87□□□□□ -0.03
MBD3-211ENST00000592965 TMEM191AQ9H0A3 160 aa14.87□□□□□ -0.03
MBD3-211ENST00000592965 OSTCQ9NRP0 149 aa14.87□□□□□ -0.03
MBD3-211ENST00000592965 CHCHD10Q8WYQ3 142 aaPredicted RBP14.86□□□□□ -0.03
MBD3-211ENST00000592965 PMCHP20382 165 aa14.85□□□□□ -0.03
MBD3-211ENST00000592965 RPL23P62829 140 aaKnown RBP14.85□□□□□ -0.03
MBD3-211ENST00000592965 RNF185Q96GF1 192 aa14.85□□□□□ -0.03
MBD3-211ENST00000592965 GAS8-AS1O95177 125 aa14.84□□□□□ -0.03
MBD3-211ENST00000592965 ESDP10768 282 aa14.84□□□□□ -0.03
MBD3-211ENST00000592965 PEA15Q15121 130 aa14.84□□□□□ -0.03
MBD3-211ENST00000592965 ISOC2Q96AB3 205 aa14.84□□□□□ -0.03
MBD3-211ENST00000592965 SMDT1Q9H4I9 107 aa14.84□□□□□ -0.03
MBD3-211ENST00000592965 ST20Q9HBF5 79 aa14.84□□□□□ -0.03
MBD3-211ENST00000592965 TSHBP01222 138 aa14.83□□□□□ -0.04
MBD3-211ENST00000592965 TMEM241Q24JQ0 296 aa14.83□□□□□ -0.04
MBD3-211ENST00000592965 MRAP2Q96G30 205 aa14.83□□□□□ -0.04
MBD3-211ENST00000592965 V9GYV3 84 aa14.83□□□□□ -0.04
MBD3-211ENST00000592965 IFITM2Q01629 132 aa14.82□□□□□ -0.04
MBD3-211ENST00000592965 FAM74A3Q4VXF1 159 aa14.82□□□□□ -0.04
MBD3-211ENST00000592965 OR5A1Q8NGJ0 315 aa14.82□□□□□ -0.04
MBD3-211ENST00000592965 SPACA4Q8TDM5 124 aa14.82□□□□□ -0.04
MBD3-211ENST00000592965 BTF3L4Q96K17 158 aa14.82□□□□□ -0.04
MBD3-211ENST00000592965 TMEM242Q9NWH2 141 aa14.82□□□□□ -0.04
MBD3-211ENST00000592965 GVQW2A0A096LPI5 108 aaPredicted RBP14.81□□□□□ -0.04
MBD3-211ENST00000592965 CHTF8P0CG12 524 aa14.81□□□□□ -0.04
MBD3-211ENST00000592965 HNRNPA3P51991 378 aaKnown RBP14.81□□□□□ -0.04
MBD3-211ENST00000592965 TRBV27A0A0K0K1C4 114 aa14.8□□□□□ -0.04
MBD3-211ENST00000592965 RAB4AP20338 218 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms