RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 DGAT2L7PQ6IED9 249 aa9.67□□□□□ -0.86
SF3A2-207ENST00000592839 GATD1Q8NB37 220 aa9.67□□□□□ -0.86
SF3A2-207ENST00000592839 TMEM243Q9BU79 118 aa9.67□□□□□ -0.86
SF3A2-207ENST00000592839 H7C423 109 aa9.66□□□□□ -0.86
SF3A2-207ENST00000592839 REG3AQ06141 175 aa9.66□□□□□ -0.86
SF3A2-207ENST00000592839 TWIST1Q15672 202 aa9.66□□□□□ -0.86
SF3A2-207ENST00000592839 OSTCQ9NRP0 149 aa9.66□□□□□ -0.86
SF3A2-207ENST00000592839 USP17L23D6RBM5 183 aa9.65□□□□□ -0.86
SF3A2-207ENST00000592839 GATCO43716 136 aaKnown RBP9.65□□□□□ -0.86
SF3A2-207ENST00000592839 GAGE6Q13070 117 aa9.65□□□□□ -0.86
SF3A2-207ENST00000592839 COTL1Q14019 142 aa9.65□□□□□ -0.86
SF3A2-207ENST00000592839 LINC00269Q8N2A0 174 aa9.65□□□□□ -0.86
SF3A2-207ENST00000592839 TSKUQ8WUA8 353 aa9.65□□□□□ -0.86
SF3A2-207ENST00000592839 SMIM7Q9BQ49 75 aa9.65□□□□□ -0.86
SF3A2-207ENST00000592839 CHAC1Q9BUX1 264 aa9.65□□□□□ -0.86
SF3A2-207ENST00000592839 SRP19P09132 144 aaKnown RBP9.64□□□□□ -0.87
SF3A2-207ENST00000592839 CNBPP62633 177 aaKnown RBP9.64□□□□□ -0.87
SF3A2-207ENST00000592839 SCXQ7RTU7 201 aa9.64□□□□□ -0.87
SF3A2-207ENST00000592839 C9orf163Q8N9P6 203 aa9.64□□□□□ -0.87
SF3A2-207ENST00000592839 CLRN3Q8NCR9 226 aa9.64□□□□□ -0.87
SF3A2-207ENST00000592839 IGLV4-60A0A075B6I1 120 aa9.63□□□□□ -0.87
SF3A2-207ENST00000592839 FAM74A3Q4VXF1 159 aa9.63□□□□□ -0.87
SF3A2-207ENST00000592839 SMIM15Q7Z3B0 74 aa9.63□□□□□ -0.87
SF3A2-207ENST00000592839 TMEM191AQ9H0A3 160 aa9.63□□□□□ -0.87
SF3A2-207ENST00000592839 SMDT1Q9H4I9 107 aa9.63□□□□□ -0.87
SF3A2-207ENST00000592839 PRSS1P07477 247 aa9.62□□□□□ -0.87
SF3A2-207ENST00000592839 AMTP48728 403 aa9.62□□□□□ -0.87
SF3A2-207ENST00000592839 KRTAP10-4P60372 401 aaPredicted RBP9.62□□□□□ -0.87
SF3A2-207ENST00000592839 HAMPP81172 84 aa9.62□□□□□ -0.87
SF3A2-207ENST00000592839 EIF5A2Q9GZV4 153 aaKnown RBP9.62□□□□□ -0.87
SF3A2-207ENST00000592839 TRAV26-2A0A0B4J265 109 aa9.61□□□□□ -0.87
SF3A2-207ENST00000592839 A0A1B0GUT8 65 aa9.61□□□□□ -0.87
SF3A2-207ENST00000592839 ZNF727A8MUV8 499 aa9.61□□□□□ -0.87
SF3A2-207ENST00000592839 HIGD1CA8MV81 97 aa9.61□□□□□ -0.87
SF3A2-207ENST00000592839 CIRBPQ14011 172 aaKnown RBP9.61□□□□□ -0.87
SF3A2-207ENST00000592839 V9GYV3 84 aa9.61□□□□□ -0.87
SF3A2-207ENST00000592839 SDHAF1A6NFY7 115 aa9.6□□□□□ -0.87
SF3A2-207ENST00000592839 HLA-DQA1P01909 254 aa9.6□□□□□ -0.87
SF3A2-207ENST00000592839 PLA2G1BP04054 148 aaKnown RBP9.6□□□□□ -0.87
SF3A2-207ENST00000592839 ZNF25P17030 456 aaPredicted RBP9.6□□□□□ -0.87
SF3A2-207ENST00000592839 LINC00528Q8N1L1 170 aa9.6□□□□□ -0.87
SF3A2-207ENST00000592839 CIRBP-AS1Q8TBR5 109 aa9.6□□□□□ -0.87
SF3A2-207ENST00000592839 ISOC2Q96AB3 205 aa9.6□□□□□ -0.87
SF3A2-207ENST00000592839 RPL39LQ96EH5 51 aaKnown RBP9.6□□□□□ -0.87
SF3A2-207ENST00000592839 PKHD1L1Q86WI1 4243 aa9.59□□□□□ -0.87
SF3A2-207ENST00000592839 TRBV27A0A0K0K1C4 114 aa9.59□□□□□ -0.87
SF3A2-207ENST00000592839 UBE2L6O14933 153 aa9.59□□□□□ -0.87
SF3A2-207ENST00000592839 ESDP10768 282 aa9.59□□□□□ -0.87
SF3A2-207ENST00000592839 POLR2KP53803 58 aaKnown RBP9.59□□□□□ -0.87
SF3A2-207ENST00000592839 LINC01620Q4KN68 170 aa9.59□□□□□ -0.87
SF3A2-207ENST00000592839 MRAP2Q96G30 205 aa9.59□□□□□ -0.87
SF3A2-207ENST00000592839 RNF185Q96GF1 192 aa9.59□□□□□ -0.87
SF3A2-207ENST00000592839 CLPSL2Q6UWE3 100 aa9.58□□□□□ -0.88
SF3A2-207ENST00000592839 BORCS7Q96B45 105 aa9.58□□□□□ -0.88
SF3A2-207ENST00000592839 I3L3M4 83 aa9.57□□□□□ -0.88
SF3A2-207ENST00000592839 J3QL48 77 aa9.57□□□□□ -0.88
SF3A2-207ENST00000592839 APCSP02743 223 aa9.57□□□□□ -0.88
SF3A2-207ENST00000592839 RAB4AP20338 218 aa9.57□□□□□ -0.88
SF3A2-207ENST00000592839 RPL23P62829 140 aaKnown RBP9.57□□□□□ -0.88
SF3A2-207ENST00000592839 SDIM1Q6ZPB5 146 aa9.57□□□□□ -0.88
SF3A2-207ENST00000592839 MRPL52Q86TS9 123 aaKnown RBP9.57□□□□□ -0.88
SF3A2-207ENST00000592839 TMEM241Q24JQ0 296 aa9.56□□□□□ -0.88
SF3A2-207ENST00000592839 NUP35Q8NFH5 326 aa9.56□□□□□ -0.88
SF3A2-207ENST00000592839 SMIM27A0A1W2PRY6 76 aa9.55□□□□□ -0.88
SF3A2-207ENST00000592839 C9JQL5 133 aa9.55□□□□□ -0.88
SF3A2-207ENST00000592839 PPP1R17O96001 155 aa9.55□□□□□ -0.88
SF3A2-207ENST00000592839 TSHBP01222 138 aa9.55□□□□□ -0.88
SF3A2-207ENST00000592839 FGF6P10767 208 aa9.55□□□□□ -0.88
SF3A2-207ENST00000592839 CEBPGP53567 150 aa9.55□□□□□ -0.88
SF3A2-207ENST00000592839 C15orf56Q8N910 161 aa9.55□□□□□ -0.88
SF3A2-207ENST00000592839 DEFB104AQ8WTQ1 72 aa9.55□□□□□ -0.88
SF3A2-207ENST00000592839 NAT8Q9UHE5 227 aa9.55□□□□□ -0.88
SF3A2-207ENST00000592839 NAT8BQ9UHF3 227 aa9.55□□□□□ -0.88
SF3A2-207ENST00000592839 FAT3Q8TDW7 4589 aa9.55□□□□□ -0.88
SF3A2-207ENST00000592839 LRP1Q07954 4544 aaKnown RBP9.54□□□□□ -0.88
SF3A2-207ENST00000592839 IGLV10-54A0A075B6I4 117 aa9.54□□□□□ -0.88
SF3A2-207ENST00000592839 KRTAP29-1A8MX34 341 aaPredicted RBP9.54□□□□□ -0.88
SF3A2-207ENST00000592839 GAS8-AS1O95177 125 aa9.54□□□□□ -0.88
SF3A2-207ENST00000592839 RIGQ13278 110 aa9.54□□□□□ -0.88
SF3A2-207ENST00000592839 OR5A1Q8NGJ0 315 aa9.54□□□□□ -0.88
SF3A2-207ENST00000592839 ST20Q9HBF5 79 aa9.54□□□□□ -0.88
SF3A2-207ENST00000592839 CSDC2Q9Y534 153 aaKnown RBP9.54□□□□□ -0.88
SF3A2-207ENST00000592839 A0A1B0GW15 77 aa9.53□□□□□ -0.88
SF3A2-207ENST00000592839 SLPIP03973 132 aa9.53□□□□□ -0.88
SF3A2-207ENST00000592839 RPS10P46783 165 aaKnown RBP9.53□□□□□ -0.88
SF3A2-207ENST00000592839 RPL32P62910 135 aaKnown RBP9.53□□□□□ -0.88
SF3A2-207ENST00000592839 AMN1Q8IY45 258 aa9.53□□□□□ -0.88
SF3A2-207ENST00000592839 NRACQ8N912 160 aa9.53□□□□□ -0.88
SF3A2-207ENST00000592839 TRBV24-1A0A075B6N3 115 aa9.52□□□□□ -0.89
SF3A2-207ENST00000592839 GVQW2A0A096LPI5 108 aaPredicted RBP9.52□□□□□ -0.89
SF3A2-207ENST00000592839 PEA15Q15121 130 aa9.52□□□□□ -0.89
SF3A2-207ENST00000592839 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.52□□□□□ -0.89
SF3A2-207ENST00000592839 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.51□□□□□ -0.89
SF3A2-207ENST00000592839 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.51□□□□□ -0.89
SF3A2-207ENST00000592839 IGKV2-29A2NJV5 120 aaPredicted RBP9.51□□□□□ -0.89
SF3A2-207ENST00000592839 LINC00862A6NCI5 91 aa9.51□□□□□ -0.89
SF3A2-207ENST00000592839 PMCHP20382 165 aa9.51□□□□□ -0.89
SF3A2-207ENST00000592839 SRSF3P84103 164 aaKnown RBP9.51□□□□□ -0.89
SF3A2-207ENST00000592839 FAM104BQ5XKR9 115 aa9.51□□□□□ -0.89
SF3A2-207ENST00000592839 AMMECR1LQ6DCA0 310 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms