RNA–Protein interactions for RNA: ENST00000592078.1

CXXC1-217, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-217ENST00000592078 A0A0J9YY99 117 aa10.62□□□□□ -0.71
CXXC1-217ENST00000592078 TRBV27A0A0K0K1C4 114 aa10.62□□□□□ -0.71
CXXC1-217ENST00000592078 SUMO2P61956 95 aaKnown RBP10.62□□□□□ -0.71
CXXC1-217ENST00000592078 TMEM70Q9BUB7 260 aa10.62□□□□□ -0.71
CXXC1-217ENST00000592078 ST20Q9HBF5 79 aa10.62□□□□□ -0.71
CXXC1-217ENST00000592078 GAGE12JA6NER3 117 aa10.61□□□□□ -0.71
CXXC1-217ENST00000592078 SDHAF1A6NFY7 115 aa10.61□□□□□ -0.71
CXXC1-217ENST00000592078 NUDT3O95989 172 aa10.61□□□□□ -0.71
CXXC1-217ENST00000592078 SRIP30626 198 aa10.61□□□□□ -0.71
CXXC1-217ENST00000592078 TIRAPP58753 221 aa10.61□□□□□ -0.71
CXXC1-217ENST00000592078 GAGE1Q13065 139 aa10.61□□□□□ -0.71
CXXC1-217ENST00000592078 GAGE4Q13068 117 aa10.61□□□□□ -0.71
CXXC1-217ENST00000592078 GAGE5Q13069 117 aa10.61□□□□□ -0.71
CXXC1-217ENST00000592078 GAGE13Q4V321 117 aa10.61□□□□□ -0.71
CXXC1-217ENST00000592078 SPATA12Q7Z6I5 190 aa10.61□□□□□ -0.71
CXXC1-217ENST00000592078 DAZ4Q86SG3 579 aaKnown RBP10.61□□□□□ -0.71
CXXC1-217ENST00000592078 Q9H8V8 135 aa10.61□□□□□ -0.71
CXXC1-217ENST00000592078 DAZ3Q9NR90 486 aaKnown RBP10.61□□□□□ -0.71
CXXC1-217ENST00000592078 ICOSQ9Y6W8 199 aa10.61□□□□□ -0.71
CXXC1-217ENST00000592078 VCYO14598 125 aa10.6□□□□□ -0.71
CXXC1-217ENST00000592078 Q0VG73 95 aa10.6□□□□□ -0.71
CXXC1-217ENST00000592078 LINC01546A6NGU7 62 aa10.59□□□□□ -0.71
CXXC1-217ENST00000592078 ATP6V0E2Q8NHE4 81 aa10.59□□□□□ -0.71
CXXC1-217ENST00000592078 C18orf32Q8TCD1 76 aa10.59□□□□□ -0.71
CXXC1-217ENST00000592078 SMIM2Q9BVW6 85 aa10.59□□□□□ -0.71
CXXC1-217ENST00000592078 LINC00588Q9Y4M8 146 aa10.59□□□□□ -0.71
CXXC1-217ENST00000592078 EPM2AB3EWF7 344 aa10.58□□□□□ -0.72
CXXC1-217ENST00000592078 NEGR1Q7Z3B1 354 aa10.58□□□□□ -0.72
CXXC1-217ENST00000592078 Q8N8P6 123 aa10.58□□□□□ -0.72
CXXC1-217ENST00000592078 UPK3BQ9BT76 320 aa10.58□□□□□ -0.72
CXXC1-217ENST00000592078 GTSF1LQ9H1H1 148 aa10.58□□□□□ -0.72
CXXC1-217ENST00000592078 MAP1LC3AQ9H492 121 aa10.58□□□□□ -0.72
CXXC1-217ENST00000592078 PGPEP1Q9NXJ5 209 aa10.58□□□□□ -0.72
CXXC1-217ENST00000592078 C1orf196B1AJZ1 125 aa10.57□□□□□ -0.72
CXXC1-217ENST00000592078 I3L3M4 83 aa10.57□□□□□ -0.72
CXXC1-217ENST00000592078 TMEM97Q5BJF2 176 aa10.57□□□□□ -0.72
CXXC1-217ENST00000592078 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.57□□□□□ -0.72
CXXC1-217ENST00000592078 NXT2Q9NPJ8 142 aaKnown RBP10.57□□□□□ -0.72
CXXC1-217ENST00000592078 HSPG2P98160 4391 aa10.56□□□□□ -0.72
CXXC1-217ENST00000592078 K7EMI3 77 aa10.56□□□□□ -0.72
CXXC1-217ENST00000592078 EREGO14944 169 aa10.56□□□□□ -0.72
CXXC1-217ENST00000592078 TCAPO15273 167 aa10.56□□□□□ -0.72
CXXC1-217ENST00000592078 HIST1H2BKO60814 126 aa10.56□□□□□ -0.72
CXXC1-217ENST00000592078 HIST1H2BJP06899 126 aa10.56□□□□□ -0.72
CXXC1-217ENST00000592078 HIST1H2BOP23527 126 aa10.56□□□□□ -0.72
CXXC1-217ENST00000592078 HIST1H2BBP33778 126 aa10.56□□□□□ -0.72
CXXC1-217ENST00000592078 HIST1H2BDP58876 126 aa10.56□□□□□ -0.72
CXXC1-217ENST00000592078 HIST1H2BCP62807 126 aa10.56□□□□□ -0.72
CXXC1-217ENST00000592078 HIST2H2BEQ16778 126 aa10.56□□□□□ -0.72
CXXC1-217ENST00000592078 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.56□□□□□ -0.72
CXXC1-217ENST00000592078 HIST1H2BHQ93079 126 aa10.56□□□□□ -0.72
CXXC1-217ENST00000592078 HIST1H2BNQ99877 126 aa10.56□□□□□ -0.72
CXXC1-217ENST00000592078 HIST1H2BMQ99879 126 aa10.56□□□□□ -0.72
CXXC1-217ENST00000592078 PMCHP20382 165 aa10.55□□□□□ -0.72
CXXC1-217ENST00000592078 IFI27P40305 119 aaPredicted RBP10.55□□□□□ -0.72
CXXC1-217ENST00000592078 CDPF1Q6NVV7 123 aa10.55□□□□□ -0.72
CXXC1-217ENST00000592078 LYPD5Q6UWN5 251 aa10.55□□□□□ -0.72
CXXC1-217ENST00000592078 NTM-AS1Q6ZSK4 140 aa10.55□□□□□ -0.72
CXXC1-217ENST00000592078 URB1-AS1Q96HZ7 61 aa10.55□□□□□ -0.72
CXXC1-217ENST00000592078 LOC389332A0A1B0GUA5 103 aa10.54□□□□□ -0.72
CXXC1-217ENST00000592078 TSHBP01222 138 aa10.54□□□□□ -0.72
CXXC1-217ENST00000592078 IQCJQ1A5X6 159 aa10.54□□□□□ -0.72
CXXC1-217ENST00000592078 COA6Q5JTJ3 125 aaKnown RBP10.54□□□□□ -0.72
CXXC1-217ENST00000592078 NIT1Q86X76 327 aa10.54□□□□□ -0.72
CXXC1-217ENST00000592078 KIR2DL4Q99706 377 aa10.54□□□□□ -0.72
CXXC1-217ENST00000592078 LINC00614P0C842 121 aa10.53□□□□□ -0.72
CXXC1-217ENST00000592078 ESDP10768 282 aa10.53□□□□□ -0.72
CXXC1-217ENST00000592078 RAB5BP61020 215 aa10.53□□□□□ -0.72
CXXC1-217ENST00000592078 COTL1Q14019 142 aa10.53□□□□□ -0.72
CXXC1-217ENST00000592078 ESRGQ1W209 222 aa10.53□□□□□ -0.72
CXXC1-217ENST00000592078 PRSS3P2Q8NHM4 247 aa10.53□□□□□ -0.72
CXXC1-217ENST00000592078 TRBV6-8A0A0A6YYG3 113 aa10.52□□□□□ -0.73
CXXC1-217ENST00000592078 IGHV3-38A0A0C4DH36 116 aa10.52□□□□□ -0.73
CXXC1-217ENST00000592078 INAFM2P0DMQ5 153 aa10.52□□□□□ -0.73
CXXC1-217ENST00000592078 LELP1Q5T871 98 aa10.52□□□□□ -0.73
CXXC1-217ENST00000592078 MRPS16Q9Y3D3 137 aaKnown RBP10.52□□□□□ -0.73
CXXC1-217ENST00000592078 LINC00310P59036 64 aa10.51□□□□□ -0.73
CXXC1-217ENST00000592078 CHCHD1Q96BP2 118 aaKnown RBP10.51□□□□□ -0.73
CXXC1-217ENST00000592078 CHCHD7Q9BUK0 85 aa10.51□□□□□ -0.73
CXXC1-217ENST00000592078 LAGE3Q14657 143 aa10.5□□□□□ -0.73
CXXC1-217ENST00000592078 IGHV1-24A0A0C4DH33 117 aa10.49□□□□□ -0.73
CXXC1-217ENST00000592078 H7C423 109 aa10.49□□□□□ -0.73
CXXC1-217ENST00000592078 ORMDL2Q53FV1 153 aa10.49□□□□□ -0.73
CXXC1-217ENST00000592078 FA2HQ7L5A8 372 aa10.49□□□□□ -0.73
CXXC1-217ENST00000592078 BAGE3Q86Y29 109 aa10.49□□□□□ -0.73
CXXC1-217ENST00000592078 AP5S1Q9NUS5 200 aa10.49□□□□□ -0.73
CXXC1-217ENST00000592078 FCER1GP30273 86 aa10.48□□□□□ -0.73
CXXC1-217ENST00000592078 KRTAP10-2P60368 255 aa10.48□□□□□ -0.73
CXXC1-217ENST00000592078 NFE4Q86UQ8 179 aa10.48□□□□□ -0.73
CXXC1-217ENST00000592078 C20orf203Q8NBC4 194 aa10.48□□□□□ -0.73
CXXC1-217ENST00000592078 TRBV25-1A0A075B6N4 114 aa10.47□□□□□ -0.73
CXXC1-217ENST00000592078 K7EP13 123 aa10.47□□□□□ -0.73
CXXC1-217ENST00000592078 G0S2P27469 103 aa10.47□□□□□ -0.73
CXXC1-217ENST00000592078 AMTP48728 403 aa10.47□□□□□ -0.73
CXXC1-217ENST00000592078 TMEM243Q9BU79 118 aa10.47□□□□□ -0.73
CXXC1-217ENST00000592078 LRP1BQ9NZR2 4599 aa10.46□□□□□ -0.73
CXXC1-217ENST00000592078 DMBT1Q9UGM3 2413 aaPredicted RBP10.46□□□□□ -0.73
CXXC1-217ENST00000592078 NUPR1O60356 82 aa10.46□□□□□ -0.73
CXXC1-217ENST00000592078 SERF1AO75920 110 aa10.46□□□□□ -0.73
CXXC1-217ENST00000592078 DEFB104AQ8WTQ1 72 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms