RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 A0A1B0GUT8 65 aa17.93■□□□□ 0.46
SMAD4-213ENST00000591914 MIAQ16674 131 aa17.93■□□□□ 0.46
SMAD4-213ENST00000591914 COTL1Q14019 142 aa17.92■□□□□ 0.46
SMAD4-213ENST00000591914 RPL39LQ96EH5 51 aaKnown RBP17.92■□□□□ 0.46
SMAD4-213ENST00000591914 NAT8Q9UHE5 227 aa17.92■□□□□ 0.46
SMAD4-213ENST00000591914 LINC00269Q8N2A0 174 aa17.91■□□□□ 0.46
SMAD4-213ENST00000591914 DEFB104AQ8WTQ1 72 aa17.9■□□□□ 0.46
SMAD4-213ENST00000591914 TMEM70Q9BUB7 260 aa17.9■□□□□ 0.46
SMAD4-213ENST00000591914 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.89■□□□□ 0.45
SMAD4-213ENST00000591914 A0A1B0GUV1 79 aa17.89■□□□□ 0.45
SMAD4-213ENST00000591914 AMTP48728 403 aa17.89■□□□□ 0.45
SMAD4-213ENST00000591914 ADIRFQ15847 76 aa17.89■□□□□ 0.45
SMAD4-213ENST00000591914 TMEM191AQ9H0A3 160 aa17.89■□□□□ 0.45
SMAD4-213ENST00000591914 CLPSL2Q6UWE3 100 aa17.88■□□□□ 0.45
SMAD4-213ENST00000591914 C20orf203Q8NBC4 194 aa17.87■□□□□ 0.45
SMAD4-213ENST00000591914 NUP35Q8NFH5 326 aa17.87■□□□□ 0.45
SMAD4-213ENST00000591914 IGLV4-60A0A075B6I1 120 aa17.85■□□□□ 0.45
SMAD4-213ENST00000591914 TRBV6-5A0A0K0K1A5 114 aa17.85■□□□□ 0.45
SMAD4-213ENST00000591914 SDHAF1A6NFY7 115 aa17.85■□□□□ 0.45
SMAD4-213ENST00000591914 REG3AQ06141 175 aa17.85■□□□□ 0.45
SMAD4-213ENST00000591914 KRTAP26-1Q6PEX3 210 aa17.85■□□□□ 0.45
SMAD4-213ENST00000591914 RNF185Q96GF1 192 aa17.85■□□□□ 0.45
SMAD4-213ENST00000591914 UBE2L6O14933 153 aa17.84■□□□□ 0.45
SMAD4-213ENST00000591914 NCR2O95944 276 aa17.84■□□□□ 0.45
SMAD4-213ENST00000591914 NAT8BQ9UHF3 227 aa17.84■□□□□ 0.45
SMAD4-213ENST00000591914 GAS8-AS1O95177 125 aa17.83■□□□□ 0.44
SMAD4-213ENST00000591914 RAB4AP20338 218 aa17.83■□□□□ 0.44
SMAD4-213ENST00000591914 RIGQ13278 110 aa17.83■□□□□ 0.44
SMAD4-213ENST00000591914 HLA-DQA1P01909 254 aa17.82■□□□□ 0.44
SMAD4-213ENST00000591914 C14orf177Q52M58 125 aa17.82■□□□□ 0.44
SMAD4-213ENST00000591914 FAM30AQ9NZY2 134 aa17.82■□□□□ 0.44
SMAD4-213ENST00000591914 DNAH8Q96JB1 4490 aa17.82■□□□□ 0.44
SMAD4-213ENST00000591914 SMIM27A0A1W2PRY6 76 aa17.81■□□□□ 0.44
SMAD4-213ENST00000591914 AMN1Q8IY45 258 aa17.81■□□□□ 0.44
SMAD4-213ENST00000591914 MRAP2Q96G30 205 aa17.81■□□□□ 0.44
SMAD4-213ENST00000591914 HAMPP81172 84 aa17.8■□□□□ 0.44
SMAD4-213ENST00000591914 Q6ZSA8 131 aa17.8■□□□□ 0.44
SMAD4-213ENST00000591914 TRAV8-4A0A0B4J246 113 aa17.79■□□□□ 0.44
SMAD4-213ENST00000591914 EPM2AB3EWF7 344 aa17.79■□□□□ 0.44
SMAD4-213ENST00000591914 USP17L23D6RBM5 183 aa17.79■□□□□ 0.44
SMAD4-213ENST00000591914 I3L3M4 83 aa17.79■□□□□ 0.44
SMAD4-213ENST00000591914 ST20Q9HBF5 79 aa17.79■□□□□ 0.44
SMAD4-213ENST00000591914 APCSP02743 223 aa17.78■□□□□ 0.44
SMAD4-213ENST00000591914 FAT1Q14517 4588 aa17.78■□□□□ 0.44
SMAD4-213ENST00000591914 IGLV10-54A0A075B6I4 117 aa17.77■□□□□ 0.44
SMAD4-213ENST00000591914 H7C423 109 aa17.77■□□□□ 0.44
SMAD4-213ENST00000591914 PMCHP20382 165 aa17.77■□□□□ 0.44
SMAD4-213ENST00000591914 RPS10P46783 165 aaKnown RBP17.77■□□□□ 0.44
SMAD4-213ENST00000591914 LINC01620Q4KN68 170 aa17.77■□□□□ 0.44
SMAD4-213ENST00000591914 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.75■□□□□ 0.43
SMAD4-213ENST00000591914 IGKV2-29A2NJV5 120 aaPredicted RBP17.75■□□□□ 0.43
SMAD4-213ENST00000591914 POLR2KP53803 58 aaKnown RBP17.75■□□□□ 0.43
SMAD4-213ENST00000591914 RAB14P61106 215 aa17.75■□□□□ 0.43
SMAD4-213ENST00000591914 TRBV27A0A0K0K1C4 114 aa17.74■□□□□ 0.43
SMAD4-213ENST00000591914 TSHBP01222 138 aa17.74■□□□□ 0.43
SMAD4-213ENST00000591914 SMR3BP02814 79 aaPredicted RBP17.73■□□□□ 0.43
SMAD4-213ENST00000591914 AMMECR1LQ6DCA0 310 aa17.73■□□□□ 0.43
SMAD4-213ENST00000591914 A0A1B0GW15 77 aa17.72■□□□□ 0.43
SMAD4-213ENST00000591914 SMKR1H3BMG3 65 aa17.72■□□□□ 0.43
SMAD4-213ENST00000591914 PRSS1P07477 247 aa17.72■□□□□ 0.43
SMAD4-213ENST00000591914 FGF6P10767 208 aa17.72■□□□□ 0.43
SMAD4-213ENST00000591914 ESDP10768 282 aa17.72■□□□□ 0.43
SMAD4-213ENST00000591914 Q5VSD8 79 aa17.72■□□□□ 0.43
SMAD4-213ENST00000591914 FAM104BQ5XKR9 115 aa17.72■□□□□ 0.43
SMAD4-213ENST00000591914 TMEM242Q9NWH2 141 aa17.72■□□□□ 0.43
SMAD4-213ENST00000591914 PPP1R17O96001 155 aa17.71■□□□□ 0.43
SMAD4-213ENST00000591914 NRACQ8N912 160 aa17.71■□□□□ 0.43
SMAD4-213ENST00000591914 CAMPP49913 170 aa17.7■□□□□ 0.42
SMAD4-213ENST00000591914 RNASEKQ6P5S7 137 aaKnown RBP17.7■□□□□ 0.42
SMAD4-213ENST00000591914 ZNF25P17030 456 aaPredicted RBP17.69■□□□□ 0.42
SMAD4-213ENST00000591914 MRPL51Q4U2R6 128 aaKnown RBP17.69■□□□□ 0.42
SMAD4-213ENST00000591914 VPS13BQ7Z7G8 4022 aa17.69■□□□□ 0.42
SMAD4-213ENST00000591914 DGAT2L7PQ6IED9 249 aa17.68■□□□□ 0.42
SMAD4-213ENST00000591914 CLRN3Q8NCR9 226 aa17.68■□□□□ 0.42
SMAD4-213ENST00000591914 SUMO2P61956 95 aaKnown RBP17.67■□□□□ 0.42
SMAD4-213ENST00000591914 CLLU1Q5K131 121 aa17.67■□□□□ 0.42
SMAD4-213ENST00000591914 A0A1B0GXF2 115 aa17.66■□□□□ 0.42
SMAD4-213ENST00000591914 VCYO14598 125 aa17.66■□□□□ 0.42
SMAD4-213ENST00000591914 HBBP68871 147 aa17.66■□□□□ 0.42
SMAD4-213ENST00000591914 IGKV3OR2-268A0A0C4DH90 116 aa17.65■□□□□ 0.42
SMAD4-213ENST00000591914 LINC00862A6NCI5 91 aa17.65■□□□□ 0.42
SMAD4-213ENST00000591914 FAM229AH3BQW9 127 aa17.65■□□□□ 0.42
SMAD4-213ENST00000591914 S100A8P05109 93 aa17.65■□□□□ 0.42
SMAD4-213ENST00000591914 MRPL54Q6P161 138 aaKnown RBP17.65■□□□□ 0.42
SMAD4-213ENST00000591914 PPP1R2P9O14990 202 aa17.64■□□□□ 0.41
SMAD4-213ENST00000591914 PNRC1Q12796 327 aaPredicted RBP17.64■□□□□ 0.41
SMAD4-213ENST00000591914 MRPL52Q86TS9 123 aaKnown RBP17.64■□□□□ 0.41
SMAD4-213ENST00000591914 BTF3L4Q96K17 158 aa17.64■□□□□ 0.41
SMAD4-213ENST00000591914 TMEM101Q96IK0 257 aa17.63■□□□□ 0.41
SMAD4-213ENST00000591914 TRBV24-1A0A075B6N3 115 aa17.62■□□□□ 0.41
SMAD4-213ENST00000591914 C7orf77A4D0Y5 90 aa17.62■□□□□ 0.41
SMAD4-213ENST00000591914 GAGE12HA6NDE8 117 aa17.62■□□□□ 0.41
SMAD4-213ENST00000591914 F8W036 122 aa17.62■□□□□ 0.41
SMAD4-213ENST00000591914 SCXQ7RTU7 201 aa17.62■□□□□ 0.41
SMAD4-213ENST00000591914 C9orf163Q8N9P6 203 aa17.62■□□□□ 0.41
SMAD4-213ENST00000591914 OR5A1Q8NGJ0 315 aa17.62■□□□□ 0.41
SMAD4-213ENST00000591914 CHAC1Q9BUX1 264 aa17.62■□□□□ 0.41
SMAD4-213ENST00000591914 SRRM2Q9UQ35 2752 aaKnown RBP17.61■□□□□ 0.41
SMAD4-213ENST00000591914 FCER1GP30273 86 aa17.61■□□□□ 0.41
SMAD4-213ENST00000591914 CKS2P33552 79 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms