RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 EPM2AB3EWF7 344 aa5.03□□□□□ -1.6
VMP1-213ENST00000591877 RS1O15537 224 aa5.03□□□□□ -1.6
VMP1-213ENST00000591877 ORM1P02763 201 aa5.03□□□□□ -1.6
VMP1-213ENST00000591877 PFN1P07737 140 aaKnown RBP5.03□□□□□ -1.6
VMP1-213ENST00000591877 RNASE3P12724 160 aaKnown RBP5.03□□□□□ -1.6
VMP1-213ENST00000591877 SRIP30626 198 aa5.03□□□□□ -1.6
VMP1-213ENST00000591877 FUSP35637 526 aaKnown RBP eCLIP5.03□□□□□ -1.6
VMP1-213ENST00000591877 CEBPGP53567 150 aa5.03□□□□□ -1.6
VMP1-213ENST00000591877 PRNTQ86SH4 94 aa5.03□□□□□ -1.6
VMP1-213ENST00000591877 SMIM7Q9BQ49 75 aa5.03□□□□□ -1.6
VMP1-213ENST00000591877 TCEAL7Q9BRU2 100 aa5.03□□□□□ -1.6
VMP1-213ENST00000591877 DNAH5Q8TE73 4624 aa5.03□□□□□ -1.6
VMP1-213ENST00000591877 APOBP04114 4563 aaKnown RBP5.02□□□□□ -1.61
VMP1-213ENST00000591877 A0A087WWC5 75 aa5.02□□□□□ -1.61
VMP1-213ENST00000591877 IGKV3D-20A0A0C4DH25 116 aa5.02□□□□□ -1.61
VMP1-213ENST00000591877 ZNF727A8MUV8 499 aa5.02□□□□□ -1.61
VMP1-213ENST00000591877 B4DEV8 164 aa5.02□□□□□ -1.61
VMP1-213ENST00000591877 C9JCJ5 164 aa5.02□□□□□ -1.61
VMP1-213ENST00000591877 M0R036 132 aa5.02□□□□□ -1.61
VMP1-213ENST00000591877 DNAH10OSP0CZ25 163 aa5.02□□□□□ -1.61
VMP1-213ENST00000591877 CRIP1P50238 77 aa5.02□□□□□ -1.61
VMP1-213ENST00000591877 UBE2G2P60604 165 aa5.02□□□□□ -1.61
VMP1-213ENST00000591877 SMUG1Q53HV7 270 aa5.02□□□□□ -1.61
VMP1-213ENST00000591877 CFAP126Q5VTH2 177 aa5.02□□□□□ -1.61
VMP1-213ENST00000591877 SLC25A29Q8N8R3 303 aa5.02□□□□□ -1.61
VMP1-213ENST00000591877 NDFIP1Q9BT67 221 aa5.02□□□□□ -1.61
VMP1-213ENST00000591877 SMCO4Q9NRQ5 59 aa5.02□□□□□ -1.61
VMP1-213ENST00000591877 NAT8Q9UHE5 227 aa5.02□□□□□ -1.61
VMP1-213ENST00000591877 LY96Q9Y6Y9 160 aa5.02□□□□□ -1.61
VMP1-213ENST00000591877 A0A087WYN8 130 aa5.01□□□□□ -1.61
VMP1-213ENST00000591877 IGHV3-73A0A0B4J1V6 119 aa5.01□□□□□ -1.61
VMP1-213ENST00000591877 C7orf77A4D0Y5 90 aa5.01□□□□□ -1.61
VMP1-213ENST00000591877 SAPCD1Q5SSQ6 148 aa5.01□□□□□ -1.61
VMP1-213ENST00000591877 PTH2Q96A98 100 aa5.01□□□□□ -1.61
VMP1-213ENST00000591877 RPS10P5Q9NQ39 176 aa5.01□□□□□ -1.61
VMP1-213ENST00000591877 A0A087WTM6 91 aa5□□□□□ -1.61
VMP1-213ENST00000591877 TRBV6-4A0A1B0GX49 114 aa5□□□□□ -1.61
VMP1-213ENST00000591877 PEX7O00628 323 aa5□□□□□ -1.61
VMP1-213ENST00000591877 TMEM241Q24JQ0 296 aa5□□□□□ -1.61
VMP1-213ENST00000591877 Q86TA4 180 aa5□□□□□ -1.61
VMP1-213ENST00000591877 ZC2HC1AQ96GY0 325 aa5□□□□□ -1.61
VMP1-213ENST00000591877 Q9UF83 564 aa5□□□□□ -1.61
VMP1-213ENST00000591877 TRAV9-2A0A087WT02 112 aa4.99□□□□□ -1.61
VMP1-213ENST00000591877 NDUFAF8A1L188 74 aa4.99□□□□□ -1.61
VMP1-213ENST00000591877 FABP5P3A8MUU1 101 aa4.99□□□□□ -1.61
VMP1-213ENST00000591877 K7EP13 123 aa4.99□□□□□ -1.61
VMP1-213ENST00000591877 EVI2AP22794 236 aa4.99□□□□□ -1.61
VMP1-213ENST00000591877 RPL23P62829 140 aaKnown RBP4.99□□□□□ -1.61
VMP1-213ENST00000591877 RHOHQ15669 191 aa4.99□□□□□ -1.61
VMP1-213ENST00000591877 ADIRFQ15847 76 aa4.99□□□□□ -1.61
VMP1-213ENST00000591877 DNLZQ5SXM8 178 aa4.99□□□□□ -1.61
VMP1-213ENST00000591877 ZC2HC1BQ5TFG8 222 aa4.99□□□□□ -1.61
VMP1-213ENST00000591877 UFSP1Q6NVU6 142 aa4.99□□□□□ -1.61
VMP1-213ENST00000591877 SH2D6Q7Z4S9 175 aa4.99□□□□□ -1.61
VMP1-213ENST00000591877 CBLN2Q8IUK8 224 aa4.99□□□□□ -1.61
VMP1-213ENST00000591877 HIST1H2BAQ96A08 127 aa4.99□□□□□ -1.61
VMP1-213ENST00000591877 SAMD10Q9BYL1 202 aa4.99□□□□□ -1.61
VMP1-213ENST00000591877 SCRT2Q9NQ03 307 aa4.99□□□□□ -1.61
VMP1-213ENST00000591877 TMEM242Q9NWH2 141 aa4.99□□□□□ -1.61
VMP1-213ENST00000591877 TRBV20OR9-2A0A075B6H5 130 aa4.98□□□□□ -1.61
VMP1-213ENST00000591877 MT-ND4LP03901 98 aa4.98□□□□□ -1.61
VMP1-213ENST00000591877 S100A9P06702 114 aaKnown RBP4.98□□□□□ -1.61
VMP1-213ENST00000591877 CRYGDP07320 174 aa4.98□□□□□ -1.61
VMP1-213ENST00000591877 LINC00694P0DN24 101 aa4.98□□□□□ -1.61
VMP1-213ENST00000591877 ASIPP42127 132 aa4.98□□□□□ -1.61
VMP1-213ENST00000591877 AKR1C3P42330 323 aa4.98□□□□□ -1.61
VMP1-213ENST00000591877 LINC01556Q5JQF7 62 aa4.98□□□□□ -1.61
VMP1-213ENST00000591877 LINC01551Q86U37 167 aa4.98□□□□□ -1.61
VMP1-213ENST00000591877 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.98□□□□□ -1.61
VMP1-213ENST00000591877 PRADC1Q9BSG0 188 aa4.98□□□□□ -1.61
VMP1-213ENST00000591877 DERL1Q9BUN8 251 aa4.98□□□□□ -1.61
VMP1-213ENST00000591877 PPDPFQ9H3Y8 114 aa4.98□□□□□ -1.61
VMP1-213ENST00000591877 IL36BQ9NZH7 164 aa4.98□□□□□ -1.61
VMP1-213ENST00000591877 TRBV6-1A0A0K0K1D8 114 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 GRIFINA4D1Z8 144 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 LRCOL1A6NCL2 159 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 RPL37AP8A6NKH3 93 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 A8MWV9 139 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 IBA57-AS1B1ANH7 110 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 H3BVH4 76 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 PPP1R2P9O14990 202 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 SH2D1AO60880 128 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 ARMS2P0C7Q2 107 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 MGST1P10620 155 aaKnown RBP4.97□□□□□ -1.61
VMP1-213ENST00000591877 S100A4P26447 101 aaKnown RBP4.97□□□□□ -1.61
VMP1-213ENST00000591877 RPL35P42766 123 aaKnown RBP4.97□□□□□ -1.61
VMP1-213ENST00000591877 KRTAP10-1P60331 282 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 LAGE3Q14657 143 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 LELP1Q5T871 98 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 ZFP2Q6ZN57 461 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 C14orf178Q8N769 122 aaPredicted RBP4.97□□□□□ -1.61
VMP1-213ENST00000591877 ATP6V0E2Q8NHE4 81 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 ISOC2Q96AB3 205 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 SMIM12Q96EX1 92 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 FMC1Q96HJ9 113 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 GTSF1LQ9H1H1 148 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 ZFP30Q9Y2G7 519 aa4.97□□□□□ -1.61
VMP1-213ENST00000591877 COLCA2A8K830 154 aa4.96□□□□□ -1.62
VMP1-213ENST00000591877 H7C423 109 aa4.96□□□□□ -1.62
VMP1-213ENST00000591877 LTAP01374 205 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms