RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 COX7A1P24310 79 aa2.32□□□□□ -2.04
VMP1-212ENST00000591782 C16orf47Q6ZP98 133 aaPredicted RBP2.32□□□□□ -2.04
VMP1-212ENST00000591782 DYNAPQ8N1N2 210 aa2.32□□□□□ -2.04
VMP1-212ENST00000591782 Q8N6K4 173 aa2.32□□□□□ -2.04
VMP1-212ENST00000591782 ITLN2Q8WWU7 325 aaPredicted RBP2.32□□□□□ -2.04
VMP1-212ENST00000591782 RNASE6Q93091 150 aaKnown RBP2.32□□□□□ -2.04
VMP1-212ENST00000591782 FAM167A-AS1Q96KT0 104 aa2.32□□□□□ -2.04
VMP1-212ENST00000591782 WFDC6Q9BQY6 131 aa2.32□□□□□ -2.04
VMP1-212ENST00000591782 TIMM8BQ9Y5J9 83 aaPredicted RBP2.32□□□□□ -2.04
VMP1-212ENST00000591782 FLNBO75369 2602 aaKnown RBP2.32□□□□□ -2.04
VMP1-212ENST00000591782 CD163L1Q9NR16 1453 aa2.32□□□□□ -2.04
VMP1-212ENST00000591782 NUP214P35658 2090 aaPredicted RBP2.32□□□□□ -2.04
VMP1-212ENST00000591782 FASNP49327 2511 aaKnown RBP2.31□□□□□ -2.04
VMP1-212ENST00000591782 MYOFQ9NZM1 2061 aa2.31□□□□□ -2.04
VMP1-212ENST00000591782 IGKV1-27A0A075B6S5 117 aa2.31□□□□□ -2.04
VMP1-212ENST00000591782 IGLV3-32A0A0A0MS00 114 aa2.31□□□□□ -2.04
VMP1-212ENST00000591782 IGKV1-8A0A0C4DH67 115 aa2.31□□□□□ -2.04
VMP1-212ENST00000591782 PANO1I0J062 215 aa2.31□□□□□ -2.04
VMP1-212ENST00000591782 WISP3O95389 354 aaPredicted RBP2.31□□□□□ -2.04
VMP1-212ENST00000591782 IGLV1-47P01700 117 aa2.31□□□□□ -2.04
VMP1-212ENST00000591782 MIFP14174 115 aa2.31□□□□□ -2.04
VMP1-212ENST00000591782 BSPH1Q075Z2 132 aa2.31□□□□□ -2.04
VMP1-212ENST00000591782 EGFEM1PQ0D2K5 195 aa2.31□□□□□ -2.04
VMP1-212ENST00000591782 KISS1Q15726 138 aa2.31□□□□□ -2.04
VMP1-212ENST00000591782 LINC00173Q6ZV60 143 aa2.31□□□□□ -2.04
VMP1-212ENST00000591782 FAM223AQ8IWN6 122 aa2.31□□□□□ -2.04
VMP1-212ENST00000591782 SPTSSBQ8NFR3 76 aa2.31□□□□□ -2.04
VMP1-212ENST00000591782 PSENENQ9NZ42 101 aa2.31□□□□□ -2.04
VMP1-212ENST00000591782 ZDBF2Q9HCK1 2354 aa2.31□□□□□ -2.04
VMP1-212ENST00000591782 EPG5Q9HCE0 2579 aa2.31□□□□□ -2.04
VMP1-212ENST00000591782 ZNF831Q5JPB2 1677 aa2.31□□□□□ -2.04
VMP1-212ENST00000591782 REV3LO60673 3130 aa2.31□□□□□ -2.04
VMP1-212ENST00000591782 HEATR1Q9H583 2144 aaKnown RBP2.3□□□□□ -2.04
VMP1-212ENST00000591782 IGKV1D-17A0A075B6S4 117 aa2.3□□□□□ -2.04
VMP1-212ENST00000591782 TRAV12-1A0A0B4J245 112 aa2.3□□□□□ -2.04
VMP1-212ENST00000591782 IGHV5-51A0A0C4DH38 117 aa2.3□□□□□ -2.04
VMP1-212ENST00000591782 hDV103S1A0JD37 113 aa2.3□□□□□ -2.04
VMP1-212ENST00000591782 CPSF4LA6NMK7 179 aaKnown RBP2.3□□□□□ -2.04
VMP1-212ENST00000591782 A6NN06 94 aa2.3□□□□□ -2.04
VMP1-212ENST00000591782 K7ERS5 55 aa2.3□□□□□ -2.04
VMP1-212ENST00000591782 PIN1P1O15428 100 aa2.3□□□□□ -2.04
VMP1-212ENST00000591782 ZNF861PO60384 105 aa2.3□□□□□ -2.04
VMP1-212ENST00000591782 SPINK4O60575 86 aa2.3□□□□□ -2.04
VMP1-212ENST00000591782 C17orf82Q86X59 251 aaPredicted RBP2.3□□□□□ -2.04
VMP1-212ENST00000591782 CCL4L1Q8NHW4 92 aa2.3□□□□□ -2.04
VMP1-212ENST00000591782 RETNLBQ9BQ08 111 aa2.3□□□□□ -2.04
VMP1-212ENST00000591782 C11orf1Q9H5F2 150 aa2.3□□□□□ -2.04
VMP1-212ENST00000591782 RPP21Q9H633 154 aaKnown RBP2.3□□□□□ -2.04
VMP1-212ENST00000591782 NDUFA12Q9UI09 145 aa2.3□□□□□ -2.04
VMP1-212ENST00000591782 UBE2D4Q9Y2X8 147 aa2.3□□□□□ -2.04
VMP1-212ENST00000591782 SSC5DA1L4H1 1573 aa2.3□□□□□ -2.04
VMP1-212ENST00000591782 ZNF462Q96JM2 2506 aa2.3□□□□□ -2.04
VMP1-212ENST00000591782 HTTP42858 3142 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 USP9XQ93008 2570 aaPredicted RBP2.29□□□□□ -2.04
VMP1-212ENST00000591782 ARID1AO14497 2285 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 COL5A1P20908 1838 aaPredicted RBP2.29□□□□□ -2.04
VMP1-212ENST00000591782 TRAV23DV6A0A075B6W5 121 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 IGHV7-81A0A0B4J1V7 117 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 FAM223BA6NKX1 122 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 HIGD1CA8MV81 97 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 D6R8Y8 96 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 F8VRH5 84 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 K7EMI3 77 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 IGHV3-48P01763 117 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 IGKV1-16P04430 117 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 MSMBP08118 114 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 IGHV3-43DP0DP04 118 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 NPPCP23582 126 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 SPINT3P49223 89 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 PATE2Q6UY27 113 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 RPS27LQ71UM5 84 aaKnown RBP2.29□□□□□ -2.04
VMP1-212ENST00000591782 LYZL2Q7Z4W2 148 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 MUSTN1Q8IVN3 82 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 SMIM14Q96QK8 99 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 UBL5Q9BZL1 73 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 CDC42SE1Q9NRR8 79 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 ZNF355PQ9NSJ1 428 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 LINC00474Q9P2X8 69 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 ASPMQ8IZT6 3477 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 EML5Q05BV3 1969 aa2.29□□□□□ -2.04
VMP1-212ENST00000591782 BPTFQ12830 3046 aa2.28□□□□□ -2.04
VMP1-212ENST00000591782 IGHV1OR15-1A0A075B7D0 117 aa2.28□□□□□ -2.04
VMP1-212ENST00000591782 IGHV3-72A0A0B4J1Y9 119 aa2.28□□□□□ -2.04
VMP1-212ENST00000591782 A0A1B0GUT8 65 aa2.28□□□□□ -2.04
VMP1-212ENST00000591782 HCG22E2RYF7 251 aa2.28□□□□□ -2.04
VMP1-212ENST00000591782 M0R3E3 92 aa2.28□□□□□ -2.04
VMP1-212ENST00000591782 NDUFB1O75438 58 aa2.28□□□□□ -2.04
VMP1-212ENST00000591782 IGHV3-33P01772 117 aa2.28□□□□□ -2.04
VMP1-212ENST00000591782 BGLAPP02818 100 aa2.28□□□□□ -2.04
VMP1-212ENST00000591782 ARL14EPLP0DKL9 152 aa2.28□□□□□ -2.04
VMP1-212ENST00000591782 ZNF22P17026 224 aaPredicted RBP2.28□□□□□ -2.04
VMP1-212ENST00000591782 SYCNQ0VAF6 134 aa2.28□□□□□ -2.04
VMP1-212ENST00000591782 FXYD3Q14802 87 aa2.28□□□□□ -2.04
VMP1-212ENST00000591782 C9orf116Q5BN46 136 aaPredicted RBP2.28□□□□□ -2.04
VMP1-212ENST00000591782 TMEM61Q8N0U2 210 aa2.28□□□□□ -2.04
VMP1-212ENST00000591782 CYSTM1Q9H1C7 97 aa2.28□□□□□ -2.04
VMP1-212ENST00000591782 ICOSQ9Y6W8 199 aa2.28□□□□□ -2.04
VMP1-212ENST00000591782 XIRP2A4UGR9 3374 aa2.28□□□□□ -2.04
VMP1-212ENST00000591782 CEP290O15078 2479 aa2.28□□□□□ -2.04
VMP1-212ENST00000591782 NAV2Q8IVL1 2488 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms