RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 NOP10Q9NPE3 64 aaKnown RBP7.46□□□□□ -1.22
VPS25-206ENST00000591584 TRGV2A0A075B6R0 118 aa7.45□□□□□ -1.22
VPS25-206ENST00000591584 PLAC8L1A1L4L8 177 aa7.45□□□□□ -1.22
VPS25-206ENST00000591584 A6NDN8 102 aa7.45□□□□□ -1.22
VPS25-206ENST00000591584 Q6ZSN1 163 aa7.45□□□□□ -1.22
VPS25-206ENST00000591584 Q6ZTI0 123 aa7.45□□□□□ -1.22
VPS25-206ENST00000591584 PCP2Q8IVA1 136 aa7.45□□□□□ -1.22
VPS25-206ENST00000591584 AMELXQ99217 191 aa7.45□□□□□ -1.22
VPS25-206ENST00000591584 WFDC10AQ9H1F0 79 aa7.45□□□□□ -1.22
VPS25-206ENST00000591584 GTSF1LQ9H1H1 148 aa7.45□□□□□ -1.22
VPS25-206ENST00000591584 IGLV4-69A0A075B6H9 119 aa7.44□□□□□ -1.22
VPS25-206ENST00000591584 IGLV4-3A0A075B6K6 122 aa7.44□□□□□ -1.22
VPS25-206ENST00000591584 MYMXA0A1B0GTQ4 84 aa7.44□□□□□ -1.22
VPS25-206ENST00000591584 H7C423 109 aa7.44□□□□□ -1.22
VPS25-206ENST00000591584 MRPS36P82909 103 aaKnown RBP7.44□□□□□ -1.22
VPS25-206ENST00000591584 GAGE1Q13065 139 aa7.44□□□□□ -1.22
VPS25-206ENST00000591584 LINC00612Q8N6U2 182 aa7.44□□□□□ -1.22
VPS25-206ENST00000591584 ZNRF2Q8NHG8 242 aa7.44□□□□□ -1.22
VPS25-206ENST00000591584 ORAOV1Q8WV07 137 aa7.44□□□□□ -1.22
VPS25-206ENST00000591584 ZNF479Q96JC4 524 aa7.44□□□□□ -1.22
VPS25-206ENST00000591584 PRADC1Q9BSG0 188 aa7.44□□□□□ -1.22
VPS25-206ENST00000591584 CHCHD7Q9BUK0 85 aa7.44□□□□□ -1.22
VPS25-206ENST00000591584 CSDC2Q9Y534 153 aaKnown RBP7.44□□□□□ -1.22
VPS25-206ENST00000591584 TRBV25-1A0A075B6N4 114 aa7.43□□□□□ -1.22
VPS25-206ENST00000591584 IGKV2D-26A0A0A0MRZ7 120 aa7.43□□□□□ -1.22
VPS25-206ENST00000591584 UBE2D4Q9Y2X8 147 aa7.43□□□□□ -1.22
VPS25-206ENST00000591584 TRAV8-6A0A0B4J262 113 aa7.42□□□□□ -1.22
VPS25-206ENST00000591584 TRGV4A0A0C4DH28 118 aa7.42□□□□□ -1.22
VPS25-206ENST00000591584 GAGE12BA1L429 117 aa7.42□□□□□ -1.22
VPS25-206ENST00000591584 LYRM9A8MSI8 78 aa7.42□□□□□ -1.22
VPS25-206ENST00000591584 GAGE7O76087 117 aa7.42□□□□□ -1.22
VPS25-206ENST00000591584 GAGE12FP0CL80 117 aa7.42□□□□□ -1.22
VPS25-206ENST00000591584 GAGE12GP0CL81 117 aa7.42□□□□□ -1.22
VPS25-206ENST00000591584 GAGE12IP0CL82 117 aa7.42□□□□□ -1.22
VPS25-206ENST00000591584 UBE2D3P61077 147 aa7.42□□□□□ -1.22
VPS25-206ENST00000591584 UBE2D2P62837 147 aa7.42□□□□□ -1.22
VPS25-206ENST00000591584 SLC25A29Q8N8R3 303 aa7.42□□□□□ -1.22
VPS25-206ENST00000591584 MTORP42345 2549 aa7.42□□□□□ -1.22
VPS25-206ENST00000591584 TINCRA0A1B0GVN0 87 aa7.41□□□□□ -1.22
VPS25-206ENST00000591584 H3BRM9 83 aa7.41□□□□□ -1.22
VPS25-206ENST00000591584 TMEM170BQ5T4T1 132 aa7.41□□□□□ -1.22
VPS25-206ENST00000591584 DGAT2L7PQ6IED9 249 aa7.41□□□□□ -1.22
VPS25-206ENST00000591584 PLEKHB2Q96CS7 222 aa7.41□□□□□ -1.22
VPS25-206ENST00000591584 CHAC1Q9BUX1 264 aa7.41□□□□□ -1.22
VPS25-206ENST00000591584 TM2D2Q9BX73 214 aa7.41□□□□□ -1.22
VPS25-206ENST00000591584 COX11Q9Y6N1 276 aa7.41□□□□□ -1.22
VPS25-206ENST00000591584 NOTCH2Q04721 2471 aa7.4□□□□□ -1.22
VPS25-206ENST00000591584 HECTD1Q9ULT8 2610 aa7.4□□□□□ -1.22
VPS25-206ENST00000591584 LEPROTO15243 131 aa7.4□□□□□ -1.22
VPS25-206ENST00000591584 ZNF25P17030 456 aaPredicted RBP7.4□□□□□ -1.22
VPS25-206ENST00000591584 FHL2Q14192 279 aa7.4□□□□□ -1.22
VPS25-206ENST00000591584 SHISA2Q6UWI4 295 aa7.4□□□□□ -1.22
VPS25-206ENST00000591584 PHLDA1Q8WV24 401 aaPredicted RBP7.4□□□□□ -1.22
VPS25-206ENST00000591584 X6R8D5 127 aa7.4□□□□□ -1.22
VPS25-206ENST00000591584 GCN1Q92616 2671 aaKnown RBP7.39□□□□□ -1.23
VPS25-206ENST00000591584 WNK1Q9H4A3 2382 aa7.39□□□□□ -1.23
VPS25-206ENST00000591584 TMEM223A0PJW6 202 aa7.39□□□□□ -1.23
VPS25-206ENST00000591584 GAGE12JA6NER3 117 aa7.39□□□□□ -1.23
VPS25-206ENST00000591584 MIFP14174 115 aa7.39□□□□□ -1.23
VPS25-206ENST00000591584 LGALS3P17931 250 aaKnown RBP7.39□□□□□ -1.23
VPS25-206ENST00000591584 TIRAPP58753 221 aa7.39□□□□□ -1.23
VPS25-206ENST00000591584 GAGE4Q13068 117 aa7.39□□□□□ -1.23
VPS25-206ENST00000591584 GAGE5Q13069 117 aa7.39□□□□□ -1.23
VPS25-206ENST00000591584 GAGE13Q4V321 117 aa7.39□□□□□ -1.23
VPS25-206ENST00000591584 FAM19A3Q7Z5A8 133 aa7.39□□□□□ -1.23
VPS25-206ENST00000591584 CEND1Q8N111 149 aa7.39□□□□□ -1.23
VPS25-206ENST00000591584 MAPKAPK5-AS1Q8N8E1 139 aa7.39□□□□□ -1.23
VPS25-206ENST00000591584 FN1P02751 2386 aaKnown RBP7.38□□□□□ -1.23
VPS25-206ENST00000591584 ZNF815PA8K554 130 aa7.38□□□□□ -1.23
VPS25-206ENST00000591584 A8MZ25 164 aa7.38□□□□□ -1.23
VPS25-206ENST00000591584 TAX1BP3O14907 124 aa7.38□□□□□ -1.23
VPS25-206ENST00000591584 SMIM13P0DJ93 91 aa7.38□□□□□ -1.23
VPS25-206ENST00000591584 ZNF22P17026 224 aaPredicted RBP7.38□□□□□ -1.23
VPS25-206ENST00000591584 TCTAP57738 103 aa7.38□□□□□ -1.23
VPS25-206ENST00000591584 SCGB1D4Q6XE38 83 aa7.38□□□□□ -1.23
VPS25-206ENST00000591584 DEFB104AQ8WTQ1 72 aa7.38□□□□□ -1.23
VPS25-206ENST00000591584 TMEM101Q96IK0 257 aa7.38□□□□□ -1.23
VPS25-206ENST00000591584 OPRPNQ99935 248 aaPredicted RBP7.38□□□□□ -1.23
VPS25-206ENST00000591584 TMEM243Q9BU79 118 aa7.38□□□□□ -1.23
VPS25-206ENST00000591584 TP73-AS1Q9UF72 201 aa7.38□□□□□ -1.23
VPS25-206ENST00000591584 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.37□□□□□ -1.23
VPS25-206ENST00000591584 IGHV3-38A0A0C4DH36 116 aa7.37□□□□□ -1.23
VPS25-206ENST00000591584 A0A0J9YXV3 536 aa7.37□□□□□ -1.23
VPS25-206ENST00000591584 TEX48A0A1B0GUV7 120 aa7.37□□□□□ -1.23
VPS25-206ENST00000591584 IGKV2-29A2NJV5 120 aaPredicted RBP7.37□□□□□ -1.23
VPS25-206ENST00000591584 J3QQQ9 107 aa7.37□□□□□ -1.23
VPS25-206ENST00000591584 UBE2L6O14933 153 aa7.37□□□□□ -1.23
VPS25-206ENST00000591584 PTTG1IPP53801 180 aa7.37□□□□□ -1.23
VPS25-206ENST00000591584 HERVK_113P63121 156 aa7.37□□□□□ -1.23
VPS25-206ENST00000591584 SBSPONQ8IVN8 264 aa7.37□□□□□ -1.23
VPS25-206ENST00000591584 FAM104AQ969W3 186 aa7.37□□□□□ -1.23
VPS25-206ENST00000591584 HIST1H4GQ99525 98 aa7.37□□□□□ -1.23
VPS25-206ENST00000591584 Q9UF83 564 aa7.37□□□□□ -1.23
VPS25-206ENST00000591584 IGHV1-58A0A0C4DH39 117 aa7.36□□□□□ -1.23
VPS25-206ENST00000591584 LINC00694P0DN24 101 aa7.36□□□□□ -1.23
VPS25-206ENST00000591584 GCSHP23434 173 aa7.36□□□□□ -1.23
VPS25-206ENST00000591584 UBE2D1P51668 147 aa7.36□□□□□ -1.23
VPS25-206ENST00000591584 LINC00469Q8N7U9 141 aa7.36□□□□□ -1.23
VPS25-206ENST00000591584 C3orf56Q8N813 242 aa7.36□□□□□ -1.23
VPS25-206ENST00000591584 TTTY13Q9BZ97 58 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms