RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 Q6ZRU5 148 aa10.2□□□□□ -0.78
DDX39A-216ENST00000591275 ZC2HC1AQ96GY0 325 aa10.2□□□□□ -0.78
DDX39A-216ENST00000591275 GRIFINA4D1Z8 144 aa10.19□□□□□ -0.78
DDX39A-216ENST00000591275 LTAP01374 205 aa10.19□□□□□ -0.78
DDX39A-216ENST00000591275 ANGP03950 147 aaKnown RBP10.19□□□□□ -0.78
DDX39A-216ENST00000591275 RPS10P46783 165 aaKnown RBP10.19□□□□□ -0.78
DDX39A-216ENST00000591275 UBE2D3P61077 147 aa10.19□□□□□ -0.78
DDX39A-216ENST00000591275 UBE2D2P62837 147 aa10.19□□□□□ -0.78
DDX39A-216ENST00000591275 RPL36AP83881 106 aaKnown RBP10.19□□□□□ -0.78
DDX39A-216ENST00000591275 MPV17L2Q567V2 206 aa10.19□□□□□ -0.78
DDX39A-216ENST00000591275 C9orf163Q8N9P6 203 aa10.19□□□□□ -0.78
DDX39A-216ENST00000591275 RPL36ALQ969Q0 106 aaKnown RBP10.19□□□□□ -0.78
DDX39A-216ENST00000591275 TGIF2-C20orf24A0A0A6YYL0 155 aa10.18□□□□□ -0.78
DDX39A-216ENST00000591275 DGAT2L7PQ6IED9 249 aa10.18□□□□□ -0.78
DDX39A-216ENST00000591275 COX8CQ7Z4L0 72 aa10.18□□□□□ -0.78
DDX39A-216ENST00000591275 V9GYV3 84 aa10.18□□□□□ -0.78
DDX39A-216ENST00000591275 TNXBP22105 4242 aa10.18□□□□□ -0.78
DDX39A-216ENST00000591275 TRBV7-3A0A075B6L6 115 aa10.17□□□□□ -0.78
DDX39A-216ENST00000591275 TRBV6-8A0A0A6YYG3 113 aa10.17□□□□□ -0.78
DDX39A-216ENST00000591275 FAM231BA6NCW3 169 aa10.17□□□□□ -0.78
DDX39A-216ENST00000591275 M0R381 172 aa10.17□□□□□ -0.78
DDX39A-216ENST00000591275 CT83Q5H943 113 aa10.17□□□□□ -0.78
DDX39A-216ENST00000591275 SDIM1Q6ZPB5 146 aa10.17□□□□□ -0.78
DDX39A-216ENST00000591275 TRBV10-1A0A0K0K1A3 114 aa10.16□□□□□ -0.78
DDX39A-216ENST00000591275 CLPSL2Q6UWE3 100 aa10.16□□□□□ -0.78
DDX39A-216ENST00000591275 PHLDA3Q9Y5J5 127 aa10.16□□□□□ -0.78
DDX39A-216ENST00000591275 TMSB15BA0A087X1C1 80 aa10.15□□□□□ -0.78
DDX39A-216ENST00000591275 SMIM27A0A1W2PRY6 76 aa10.15□□□□□ -0.78
DDX39A-216ENST00000591275 C5orf52A6NGY3 159 aa10.15□□□□□ -0.78
DDX39A-216ENST00000591275 PHOX2AO14813 284 aa10.15□□□□□ -0.78
DDX39A-216ENST00000591275 S100A6P06703 90 aa10.15□□□□□ -0.78
DDX39A-216ENST00000591275 CRIP1P50238 77 aa10.15□□□□□ -0.78
DDX39A-216ENST00000591275 DNLZQ5SXM8 178 aa10.15□□□□□ -0.78
DDX39A-216ENST00000591275 RASL11AQ6T310 242 aa10.15□□□□□ -0.78
DDX39A-216ENST00000591275 Q86TA4 180 aa10.15□□□□□ -0.78
DDX39A-216ENST00000591275 CHCHD5Q9BSY4 110 aa10.15□□□□□ -0.78
DDX39A-216ENST00000591275 GATCO43716 136 aaKnown RBP10.14□□□□□ -0.79
DDX39A-216ENST00000591275 SH2D1AO60880 128 aa10.14□□□□□ -0.79
DDX39A-216ENST00000591275 ODF1Q14990 250 aa10.14□□□□□ -0.79
DDX39A-216ENST00000591275 MIAQ16674 131 aa10.14□□□□□ -0.79
DDX39A-216ENST00000591275 NUDT10Q8NFP7 164 aa10.14□□□□□ -0.79
DDX39A-216ENST00000591275 NUDT11Q96G61 164 aa10.14□□□□□ -0.79
DDX39A-216ENST00000591275 GFRA4Q9GZZ7 299 aa10.14□□□□□ -0.79
DDX39A-216ENST00000591275 C19orf71A6NCJ1 209 aa10.13□□□□□ -0.79
DDX39A-216ENST00000591275 FOXA3P55318 350 aaPredicted RBP10.13□□□□□ -0.79
DDX39A-216ENST00000591275 DPH3Q96FX2 82 aa10.13□□□□□ -0.79
DDX39A-216ENST00000591275 A8MWL6 223 aa10.12□□□□□ -0.79
DDX39A-216ENST00000591275 TRGC2P03986 189 aa10.12□□□□□ -0.79
DDX39A-216ENST00000591275 WDR73Q6P4I2 378 aa10.12□□□□□ -0.79
DDX39A-216ENST00000591275 KRTAP26-1Q6PEX3 210 aa10.12□□□□□ -0.79
DDX39A-216ENST00000591275 NEXN-AS1Q8NBZ9 246 aa10.12□□□□□ -0.79
DDX39A-216ENST00000591275 TSKUQ8WUA8 353 aa10.12□□□□□ -0.79
DDX39A-216ENST00000591275 GNB1LQ9BYB4 327 aa10.12□□□□□ -0.79
DDX39A-216ENST00000591275 MT-ND6P03923 174 aa10.11□□□□□ -0.79
DDX39A-216ENST00000591275 CHTF8P0CG12 524 aa10.11□□□□□ -0.79
DDX39A-216ENST00000591275 CIRBPQ14011 172 aaKnown RBP10.11□□□□□ -0.79
DDX39A-216ENST00000591275 ZNF56Q15929 161 aa10.11□□□□□ -0.79
DDX39A-216ENST00000591275 ZFP82Q8N141 532 aa10.11□□□□□ -0.79
DDX39A-216ENST00000591275 LINC00269Q8N2A0 174 aa10.11□□□□□ -0.79
DDX39A-216ENST00000591275 RNASE7Q9H1E1 156 aaKnown RBP10.11□□□□□ -0.79
DDX39A-216ENST00000591275 DPH3P1Q9H4G8 78 aa10.11□□□□□ -0.79
DDX39A-216ENST00000591275 A0A087WYN8 130 aa10.1□□□□□ -0.79
DDX39A-216ENST00000591275 HIST1H2BKO60814 126 aa10.1□□□□□ -0.79
DDX39A-216ENST00000591275 HIST1H2BJP06899 126 aa10.1□□□□□ -0.79
DDX39A-216ENST00000591275 HIST1H2BOP23527 126 aa10.1□□□□□ -0.79
DDX39A-216ENST00000591275 HIST1H2BBP33778 126 aa10.1□□□□□ -0.79
DDX39A-216ENST00000591275 HIST1H2BDP58876 126 aa10.1□□□□□ -0.79
DDX39A-216ENST00000591275 HIST1H2BCP62807 126 aa10.1□□□□□ -0.79
DDX39A-216ENST00000591275 HIST2H2BEQ16778 126 aa10.1□□□□□ -0.79
DDX39A-216ENST00000591275 COA6Q5JTJ3 125 aaKnown RBP10.1□□□□□ -0.79
DDX39A-216ENST00000591275 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.1□□□□□ -0.79
DDX39A-216ENST00000591275 FAM162BQ5T6X4 162 aa10.1□□□□□ -0.79
DDX39A-216ENST00000591275 ATP5L2Q7Z4Y8 100 aa10.1□□□□□ -0.79
DDX39A-216ENST00000591275 HIST1H2BHQ93079 126 aa10.1□□□□□ -0.79
DDX39A-216ENST00000591275 HIST1H2BNQ99877 126 aa10.1□□□□□ -0.79
DDX39A-216ENST00000591275 HIST1H2BMQ99879 126 aa10.1□□□□□ -0.79
DDX39A-216ENST00000591275 PRR34Q9NV39 138 aa10.1□□□□□ -0.79
DDX39A-216ENST00000591275 NAT8BQ9UHF3 227 aa10.1□□□□□ -0.79
DDX39A-216ENST00000591275 IGLV10-54A0A075B6I4 117 aa10.09□□□□□ -0.79
DDX39A-216ENST00000591275 hDV102S1A0JD36 115 aa10.09□□□□□ -0.79
DDX39A-216ENST00000591275 P01737 135 aa10.09□□□□□ -0.79
DDX39A-216ENST00000591275 RBX1P62877 108 aa10.09□□□□□ -0.79
DDX39A-216ENST00000591275 GAGE6Q13070 117 aa10.09□□□□□ -0.79
DDX39A-216ENST00000591275 NTM-AS1Q6ZSK4 140 aa10.09□□□□□ -0.79
DDX39A-216ENST00000591275 TRGC1P0CF51 173 aa10.08□□□□□ -0.8
DDX39A-216ENST00000591275 RAB4BP61018 213 aa10.08□□□□□ -0.8
DDX39A-216ENST00000591275 PKIAP61925 76 aa10.08□□□□□ -0.8
DDX39A-216ENST00000591275 SNRPEP62304 92 aaKnown RBP10.08□□□□□ -0.8
DDX39A-216ENST00000591275 CNBPP62633 177 aaKnown RBP10.08□□□□□ -0.8
DDX39A-216ENST00000591275 LINC01559Q495D7 138 aa10.08□□□□□ -0.8
DDX39A-216ENST00000591275 RPP21Q9H633 154 aaKnown RBP10.08□□□□□ -0.8
DDX39A-216ENST00000591275 TRAPPC1Q9Y5R8 145 aa10.08□□□□□ -0.8
DDX39A-216ENST00000591275 IGHV3-64A0A075B6Q5 118 aa10.07□□□□□ -0.8
DDX39A-216ENST00000591275 PRR27Q6MZM9 219 aa10.07□□□□□ -0.8
DDX39A-216ENST00000591275 A0A1B0GW15 77 aa10.06□□□□□ -0.8
DDX39A-216ENST00000591275 XKRY2A2RUG3 117 aa10.06□□□□□ -0.8
DDX39A-216ENST00000591275 SLPIP03973 132 aa10.06□□□□□ -0.8
DDX39A-216ENST00000591275 S100A8P05109 93 aa10.06□□□□□ -0.8
DDX39A-216ENST00000591275 RPS20P60866 119 aaKnown RBP10.06□□□□□ -0.8
DDX39A-216ENST00000591275 OR10AG1Q8NH19 301 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms