RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 PPP1R17O96001 155 aa7.95□□□□□ -1.14
LIG3-213ENST00000590630 ANGP03950 147 aaKnown RBP7.95□□□□□ -1.14
LIG3-213ENST00000590630 ADCYAP1P18509 176 aa7.95□□□□□ -1.14
LIG3-213ENST00000590630 AMTP48728 403 aa7.95□□□□□ -1.14
LIG3-213ENST00000590630 CAMPP49913 170 aa7.95□□□□□ -1.14
LIG3-213ENST00000590630 Q0VG73 95 aa7.95□□□□□ -1.14
LIG3-213ENST00000590630 FAM104BQ5XKR9 115 aa7.95□□□□□ -1.14
LIG3-213ENST00000590630 ATP5L2Q7Z4Y8 100 aa7.95□□□□□ -1.14
LIG3-213ENST00000590630 SPATA12Q7Z6I5 190 aa7.95□□□□□ -1.14
LIG3-213ENST00000590630 SVBPQ8N300 66 aa7.95□□□□□ -1.14
LIG3-213ENST00000590630 ST20Q9HBF5 79 aa7.95□□□□□ -1.14
LIG3-213ENST00000590630 A0A1B0GXF2 115 aa7.94□□□□□ -1.14
LIG3-213ENST00000590630 C16orf90A8MZG2 172 aa7.94□□□□□ -1.14
LIG3-213ENST00000590630 SNAPINO95295 136 aa7.94□□□□□ -1.14
LIG3-213ENST00000590630 APOC3P02656 99 aa7.94□□□□□ -1.14
LIG3-213ENST00000590630 RBX1P62877 108 aa7.94□□□□□ -1.14
LIG3-213ENST00000590630 GAGE6Q13070 117 aa7.94□□□□□ -1.14
LIG3-213ENST00000590630 MRPL54Q6P161 138 aaKnown RBP7.94□□□□□ -1.14
LIG3-213ENST00000590630 ATRAIDQ6UW56 229 aa7.94□□□□□ -1.14
LIG3-213ENST00000590630 Q8N976 141 aa7.94□□□□□ -1.14
LIG3-213ENST00000590630 UBE2WQ96B02 151 aa7.94□□□□□ -1.14
LIG3-213ENST00000590630 SEC11CQ9BY50 192 aa7.94□□□□□ -1.14
LIG3-213ENST00000590630 A0A1B0GUV1 79 aa7.93□□□□□ -1.14
LIG3-213ENST00000590630 LRCOL1A6NCL2 159 aa7.93□□□□□ -1.14
LIG3-213ENST00000590630 PCP4L1A6NKN8 68 aa7.93□□□□□ -1.14
LIG3-213ENST00000590630 I3L3M4 83 aa7.93□□□□□ -1.14
LIG3-213ENST00000590630 UBE2L6O14933 153 aa7.93□□□□□ -1.14
LIG3-213ENST00000590630 GAS8-AS1O95177 125 aa7.93□□□□□ -1.14
LIG3-213ENST00000590630 CRPP02741 224 aa7.93□□□□□ -1.14
LIG3-213ENST00000590630 RPS10P46783 165 aaKnown RBP7.93□□□□□ -1.14
LIG3-213ENST00000590630 C10orf91Q5T1B1 145 aa7.93□□□□□ -1.14
LIG3-213ENST00000590630 CDPF1Q6NVV7 123 aa7.93□□□□□ -1.14
LIG3-213ENST00000590630 LINC00469Q8N7U9 141 aa7.93□□□□□ -1.14
LIG3-213ENST00000590630 C12orf57Q99622 126 aa7.93□□□□□ -1.14
LIG3-213ENST00000590630 TMEM70Q9BUB7 260 aa7.93□□□□□ -1.14
LIG3-213ENST00000590630 PGPEP1Q9NXJ5 209 aa7.93□□□□□ -1.14
LIG3-213ENST00000590630 CARHSP1Q9Y2V2 147 aaKnown RBP7.93□□□□□ -1.14
LIG3-213ENST00000590630 TRBV27A0A0K0K1C4 114 aa7.92□□□□□ -1.14
LIG3-213ENST00000590630 APCSP02743 223 aa7.92□□□□□ -1.14
LIG3-213ENST00000590630 SMIM6P0DI80 62 aa7.92□□□□□ -1.14
LIG3-213ENST00000590630 PMCHP20382 165 aa7.92□□□□□ -1.14
LIG3-213ENST00000590630 POLR2KP53803 58 aaKnown RBP7.92□□□□□ -1.14
LIG3-213ENST00000590630 KRTAP10-2P60368 255 aa7.92□□□□□ -1.14
LIG3-213ENST00000590630 MIAQ16674 131 aa7.92□□□□□ -1.14
LIG3-213ENST00000590630 MRPL51Q4U2R6 128 aaKnown RBP7.92□□□□□ -1.14
LIG3-213ENST00000590630 ENHOQ6UWT2 76 aa7.92□□□□□ -1.14
LIG3-213ENST00000590630 NRACQ8N912 160 aa7.92□□□□□ -1.14
LIG3-213ENST00000590630 DEFB104AQ8WTQ1 72 aa7.92□□□□□ -1.14
LIG3-213ENST00000590630 PRR34Q9NV39 138 aa7.92□□□□□ -1.14
LIG3-213ENST00000590630 IGKV2D-24A0A075B6R9 120 aa7.91□□□□□ -1.14
LIG3-213ENST00000590630 SMKR1H3BMG3 65 aa7.91□□□□□ -1.14
LIG3-213ENST00000590630 H7C423 109 aa7.91□□□□□ -1.14
LIG3-213ENST00000590630 CKS2P33552 79 aa7.91□□□□□ -1.14
LIG3-213ENST00000590630 SUMO2P61956 95 aaKnown RBP7.91□□□□□ -1.14
LIG3-213ENST00000590630 IMMP2LQ96T52 175 aa7.91□□□□□ -1.14
LIG3-213ENST00000590630 C1orf43Q9BWL3 253 aa7.91□□□□□ -1.14
LIG3-213ENST00000590630 CTDSP1Q9GZU7 261 aa7.91□□□□□ -1.14
LIG3-213ENST00000590630 KIAA1109Q2LD37 5005 aa7.91□□□□□ -1.14
LIG3-213ENST00000590630 DYNC1H1Q14204 4646 aaKnown RBP7.9□□□□□ -1.14
LIG3-213ENST00000590630 TRBV24-1A0A075B6N3 115 aa7.9□□□□□ -1.14
LIG3-213ENST00000590630 VCYO14598 125 aa7.9□□□□□ -1.14
LIG3-213ENST00000590630 TSHBP01222 138 aa7.9□□□□□ -1.14
LIG3-213ENST00000590630 PPBPP02775 128 aa7.9□□□□□ -1.14
LIG3-213ENST00000590630 LINC00269Q8N2A0 174 aa7.9□□□□□ -1.14
LIG3-213ENST00000590630 BTF3L4Q96K17 158 aa7.9□□□□□ -1.14
LIG3-213ENST00000590630 S100A6P06703 90 aa7.89□□□□□ -1.15
LIG3-213ENST00000590630 AKR1D1P51857 326 aa7.89□□□□□ -1.15
LIG3-213ENST00000590630 REG3AQ06141 175 aa7.89□□□□□ -1.15
LIG3-213ENST00000590630 Q8N814 137 aa7.89□□□□□ -1.15
LIG3-213ENST00000590630 MAPKAPK5-AS1Q8N8E1 139 aa7.89□□□□□ -1.15
LIG3-213ENST00000590630 C20orf203Q8NBC4 194 aa7.89□□□□□ -1.15
LIG3-213ENST00000590630 NTN5Q8WTR8 489 aaPredicted RBP7.89□□□□□ -1.15
LIG3-213ENST00000590630 KIR2DL4Q99706 377 aa7.89□□□□□ -1.15
LIG3-213ENST00000590630 C20orf78Q9BR46 151 aa7.89□□□□□ -1.15
LIG3-213ENST00000590630 TMEM242Q9NWH2 141 aa7.89□□□□□ -1.15
LIG3-213ENST00000590630 IGLV4-60A0A075B6I1 120 aa7.88□□□□□ -1.15
LIG3-213ENST00000590630 D6R8Y8 96 aa7.88□□□□□ -1.15
LIG3-213ENST00000590630 PHOX2AO14813 284 aa7.88□□□□□ -1.15
LIG3-213ENST00000590630 ESDP10768 282 aa7.88□□□□□ -1.15
LIG3-213ENST00000590630 ZNF25P17030 456 aaPredicted RBP7.88□□□□□ -1.15
LIG3-213ENST00000590630 RPL32P62910 135 aaKnown RBP7.88□□□□□ -1.15
LIG3-213ENST00000590630 AMMECR1LQ6DCA0 310 aa7.88□□□□□ -1.15
LIG3-213ENST00000590630 CLPSL2Q6UWE3 100 aa7.88□□□□□ -1.15
LIG3-213ENST00000590630 ORMDL3Q8N138 153 aa7.88□□□□□ -1.15
LIG3-213ENST00000590630 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.87□□□□□ -1.15
LIG3-213ENST00000590630 TRAV9-1A0A075B6T8 112 aa7.87□□□□□ -1.15
LIG3-213ENST00000590630 TRAV8-4A0A0B4J246 113 aa7.87□□□□□ -1.15
LIG3-213ENST00000590630 IGKV2-29A2NJV5 120 aaPredicted RBP7.87□□□□□ -1.15
LIG3-213ENST00000590630 C7orf77A4D0Y5 90 aa7.87□□□□□ -1.15
LIG3-213ENST00000590630 TCAPO15273 167 aa7.87□□□□□ -1.15
LIG3-213ENST00000590630 TNFRSF6BO95407 300 aa7.87□□□□□ -1.15
LIG3-213ENST00000590630 FGF6P10767 208 aa7.87□□□□□ -1.15
LIG3-213ENST00000590630 FCER1GP30273 86 aa7.87□□□□□ -1.15
LIG3-213ENST00000590630 RAB5BP61020 215 aa7.87□□□□□ -1.15
LIG3-213ENST00000590630 DNAH5Q8TE73 4624 aa7.87□□□□□ -1.15
LIG3-213ENST00000590630 LRP1BQ9NZR2 4599 aa7.86□□□□□ -1.15
LIG3-213ENST00000590630 S100PP25815 95 aa7.86□□□□□ -1.15
LIG3-213ENST00000590630 WFDC2Q14508 124 aa7.86□□□□□ -1.15
LIG3-213ENST00000590630 RHEBQ15382 184 aa7.86□□□□□ -1.15
LIG3-213ENST00000590630 RNASEKQ6P5S7 137 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms