RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 LINC00315P59091 139 aa11.26□□□□□ -0.61
CIRBP-228ENST00000590347 KLK9Q9UKQ9 250 aa11.26□□□□□ -0.61
CIRBP-228ENST00000590347 UTP20O75691 2785 aaKnown RBP11.26□□□□□ -0.61
CIRBP-228ENST00000590347 Q8N2B8 174 aa11.26□□□□□ -0.61
CIRBP-228ENST00000590347 C2orf48Q96LS8 159 aa11.26□□□□□ -0.61
CIRBP-228ENST00000590347 DPM3Q9P2X0 92 aa11.26□□□□□ -0.61
CIRBP-228ENST00000590347 TRAV21A0A0B4J279 112 aa11.25□□□□□ -0.61
CIRBP-228ENST00000590347 TRACP01848 142 aa11.25□□□□□ -0.61
CIRBP-228ENST00000590347 HTN1P15515 57 aa11.25□□□□□ -0.61
CIRBP-228ENST00000590347 SPANXA1Q9NS26 97 aa11.25□□□□□ -0.61
CIRBP-228ENST00000590347 FLNCQ14315 2725 aa11.25□□□□□ -0.61
CIRBP-228ENST00000590347 TRBV7-1A0A0A6YYK4 115 aa11.25□□□□□ -0.61
CIRBP-228ENST00000590347 TMEM141Q96I45 108 aa11.25□□□□□ -0.61
CIRBP-228ENST00000590347 FAM19A4Q96LR4 140 aa11.25□□□□□ -0.61
CIRBP-228ENST00000590347 VPS13CQ709C8 3753 aa11.24□□□□□ -0.61
CIRBP-228ENST00000590347 FAM240AA0A1B0GVK7 77 aa11.24□□□□□ -0.61
CIRBP-228ENST00000590347 CCDC140Q96MF4 163 aa11.24□□□□□ -0.61
CIRBP-228ENST00000590347 TIMM17AQ99595 171 aa11.24□□□□□ -0.61
CIRBP-228ENST00000590347 IGHV1-69DA0A0B4J2H0 117 aa11.24□□□□□ -0.61
CIRBP-228ENST00000590347 TIRAPP58753 221 aa11.24□□□□□ -0.61
CIRBP-228ENST00000590347 LINC00643Q86TS7 51 aa11.24□□□□□ -0.61
CIRBP-228ENST00000590347 TMEM61Q8N0U2 210 aa11.24□□□□□ -0.61
CIRBP-228ENST00000590347 DPH3Q96FX2 82 aa11.24□□□□□ -0.61
CIRBP-228ENST00000590347 MYO18BQ8IUG5 2567 aa11.23□□□□□ -0.61
CIRBP-228ENST00000590347 TRAV12-2A0A075B6T6 113 aa11.23□□□□□ -0.61
CIRBP-228ENST00000590347 LY6LH3BQJ8 138 aa11.23□□□□□ -0.61
CIRBP-228ENST00000590347 CIRBPQ14011 172 aaKnown RBP11.23□□□□□ -0.61
CIRBP-228ENST00000590347 IGHV7-81A0A0B4J1V7 117 aa11.23□□□□□ -0.61
CIRBP-228ENST00000590347 CD28P10747 220 aa11.23□□□□□ -0.61
CIRBP-228ENST00000590347 TMEM219Q86XT9 240 aa11.23□□□□□ -0.61
CIRBP-228ENST00000590347 Q9UF83 564 aa11.22□□□□□ -0.61
CIRBP-228ENST00000590347 BAALC-AS2P0C853 105 aa11.22□□□□□ -0.61
CIRBP-228ENST00000590347 IGLV4-3A0A075B6K6 122 aa11.22□□□□□ -0.61
CIRBP-228ENST00000590347 ATP6V0E1O15342 81 aa11.22□□□□□ -0.61
CIRBP-228ENST00000590347 TRBV12-3P01733 135 aa11.22□□□□□ -0.61
CIRBP-228ENST00000590347 C9orf129Q5T035 196 aaKnown RBP11.22□□□□□ -0.61
CIRBP-228ENST00000590347 UNQ9165/PRO28630Q6UXU0 137 aa11.22□□□□□ -0.61
CIRBP-228ENST00000590347 KIF25-AS1Q9Y6Z4 181 aa11.22□□□□□ -0.61
CIRBP-228ENST00000590347 DCANP1Q8TF63 244 aa11.21□□□□□ -0.62
CIRBP-228ENST00000590347 CITED2Q99967 270 aaPredicted RBP11.21□□□□□ -0.62
CIRBP-228ENST00000590347 PEMTQ9UBM1 199 aa11.21□□□□□ -0.62
CIRBP-228ENST00000590347 WFDC9Q8NEX5 89 aa11.2□□□□□ -0.62
CIRBP-228ENST00000590347 EDN2P20800 178 aa11.2□□□□□ -0.62
CIRBP-228ENST00000590347 PROK1P58294 105 aa11.2□□□□□ -0.62
CIRBP-228ENST00000590347 ADORA2A-AS1P86434 159 aa11.2□□□□□ -0.62
CIRBP-228ENST00000590347 FAM218AQ96MZ4 157 aa11.2□□□□□ -0.62
CIRBP-228ENST00000590347 IGHV3-11P01762 117 aa11.2□□□□□ -0.62
CIRBP-228ENST00000590347 MIAQ16674 131 aa11.2□□□□□ -0.62
CIRBP-228ENST00000590347 FAM208BQ5VWN6 2430 aa11.19□□□□□ -0.62
CIRBP-228ENST00000590347 PRM2P04554 102 aa11.19□□□□□ -0.62
CIRBP-228ENST00000590347 TMEM190Q8WZ59 177 aa11.19□□□□□ -0.62
CIRBP-228ENST00000590347 DEFB121Q5J5C9 76 aa11.18□□□□□ -0.62
CIRBP-228ENST00000590347 PKIGQ9Y2B9 76 aa11.18□□□□□ -0.62
CIRBP-228ENST00000590347 C14orf132Q9NPU4 83 aa11.18□□□□□ -0.62
CIRBP-228ENST00000590347 KNCNA6PVL3 124 aa11.18□□□□□ -0.62
CIRBP-228ENST00000590347 KAAG1Q9UBP8 84 aa11.18□□□□□ -0.62
CIRBP-228ENST00000590347 POLQO75417 2590 aa11.17□□□□□ -0.62
CIRBP-228ENST00000590347 NPBQ8NG41 125 aa11.17□□□□□ -0.62
CIRBP-228ENST00000590347 CRYGAP11844 174 aa11.17□□□□□ -0.62
CIRBP-228ENST00000590347 Q5XG85 94 aa11.17□□□□□ -0.62
CIRBP-228ENST00000590347 IMUPQ9GZP8 106 aa11.17□□□□□ -0.62
CIRBP-228ENST00000590347 IGHV3-38A0A0C4DH36 116 aa11.16□□□□□ -0.62
CIRBP-228ENST00000590347 HIST1H4AP62805 103 aaKnown RBP11.16□□□□□ -0.62
CIRBP-228ENST00000590347 C20orf203Q8NBC4 194 aa11.16□□□□□ -0.62
CIRBP-228ENST00000590347 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.16□□□□□ -0.62
CIRBP-228ENST00000590347 IGKV2-29A2NJV5 120 aaPredicted RBP11.16□□□□□ -0.62
CIRBP-228ENST00000590347 CELSR2Q9HCU4 2923 aa11.16□□□□□ -0.62
CIRBP-228ENST00000590347 PPP1R17O96001 155 aa11.15□□□□□ -0.62
CIRBP-228ENST00000590347 HILS1P60008 231 aa11.15□□□□□ -0.62
CIRBP-228ENST00000590347 FAM223AQ8IWN6 122 aa11.15□□□□□ -0.62
CIRBP-228ENST00000590347 IGSF10Q6WRI0 2623 aa11.15□□□□□ -0.62
CIRBP-228ENST00000590347 TRBV27A0A0K0K1C4 114 aa11.15□□□□□ -0.62
CIRBP-228ENST00000590347 RNF5Q99942 180 aa11.15□□□□□ -0.62
CIRBP-228ENST00000590347 USP9XQ93008 2570 aaPredicted RBP11.15□□□□□ -0.63
CIRBP-228ENST00000590347 IGHV4OR15-8A0A075B7B6 117 aa11.14□□□□□ -0.63
CIRBP-228ENST00000590347 A0A087WW49 117 aa11.14□□□□□ -0.63
CIRBP-228ENST00000590347 TINCRA0A1B0GVN0 87 aa11.14□□□□□ -0.63
CIRBP-228ENST00000590347 A0A1W2PPR1 153 aa11.14□□□□□ -0.63
CIRBP-228ENST00000590347 C5orf38Q86SI9 138 aa11.14□□□□□ -0.63
CIRBP-228ENST00000590347 C1orf43Q9BWL3 253 aa11.14□□□□□ -0.63
CIRBP-228ENST00000590347 PYGO1Q9Y3Y4 419 aa11.14□□□□□ -0.63
CIRBP-228ENST00000590347 CSPG4Q6UVK1 2322 aa11.14□□□□□ -0.63
CIRBP-228ENST00000590347 SYNJ2BPP57105 145 aa11.14□□□□□ -0.63
CIRBP-228ENST00000590347 ITLN2Q8WWU7 325 aaPredicted RBP11.14□□□□□ -0.63
CIRBP-228ENST00000590347 C22orf24Q9Y442 160 aa11.14□□□□□ -0.63
CIRBP-228ENST00000590347 IGHV3OR16-10A0A075B7F0 116 aa11.13□□□□□ -0.63
CIRBP-228ENST00000590347 M0QY20 66 aa11.13□□□□□ -0.63
CIRBP-228ENST00000590347 IGHV1-58A0A0C4DH39 117 aa11.13□□□□□ -0.63
CIRBP-228ENST00000590347 ATOX1O00244 68 aa11.13□□□□□ -0.63
CIRBP-228ENST00000590347 EPG5Q9HCE0 2579 aa11.13□□□□□ -0.63
CIRBP-228ENST00000590347 PIK3CD-AS1Q5SR53 167 aa11.13□□□□□ -0.63
CIRBP-228ENST00000590347 Q8N9W7 124 aa11.13□□□□□ -0.63
CIRBP-228ENST00000590347 LINC01600Q96MT4 127 aa11.13□□□□□ -0.63
CIRBP-228ENST00000590347 CDKN2A-AS1Q9UH64 79 aa11.13□□□□□ -0.63
CIRBP-228ENST00000590347 ACYP1P07311 99 aa11.12□□□□□ -0.63
CIRBP-228ENST00000590347 RPL18AQ02543 176 aaKnown RBP11.12□□□□□ -0.63
CIRBP-228ENST00000590347 SOSTDC1Q6X4U4 206 aa11.12□□□□□ -0.63
CIRBP-228ENST00000590347 VSIG2Q96IQ7 327 aa11.12□□□□□ -0.63
CIRBP-228ENST00000590347 UCNP55089 124 aa11.11□□□□□ -0.63
CIRBP-228ENST00000590347 FHL2Q14192 279 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms