RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 COTL1Q14019 142 aa11.52□□□□□ -0.57
PRKCSH-211ENST00000590098 WDR73Q6P4I2 378 aa11.52□□□□□ -0.57
PRKCSH-211ENST00000590098 C9orf62Q8N4C0 152 aa11.52□□□□□ -0.57
PRKCSH-211ENST00000590098 TRBV20OR9-2A0A075B6H5 130 aa11.51□□□□□ -0.57
PRKCSH-211ENST00000590098 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.51□□□□□ -0.57
PRKCSH-211ENST00000590098 BCL2P10415 239 aa11.51□□□□□ -0.57
PRKCSH-211ENST00000590098 AMTP48728 403 aa11.51□□□□□ -0.57
PRKCSH-211ENST00000590098 CNBPP62633 177 aaKnown RBP11.51□□□□□ -0.57
PRKCSH-211ENST00000590098 TWIST1Q15672 202 aa11.51□□□□□ -0.57
PRKCSH-211ENST00000590098 NUDT10Q8NFP7 164 aa11.51□□□□□ -0.57
PRKCSH-211ENST00000590098 NUDT11Q96G61 164 aa11.51□□□□□ -0.57
PRKCSH-211ENST00000590098 IGHV3-64A0A075B6Q5 118 aa11.5□□□□□ -0.57
PRKCSH-211ENST00000590098 CTRLP40313 264 aa11.5□□□□□ -0.57
PRKCSH-211ENST00000590098 DPH3Q96FX2 82 aa11.5□□□□□ -0.57
PRKCSH-211ENST00000590098 GFRA4Q9GZZ7 299 aa11.5□□□□□ -0.57
PRKCSH-211ENST00000590098 PANO1I0J062 215 aa11.49□□□□□ -0.57
PRKCSH-211ENST00000590098 TAGLN2P37802 199 aaKnown RBP11.49□□□□□ -0.57
PRKCSH-211ENST00000590098 RPP21Q9H633 154 aaKnown RBP11.48□□□□□ -0.57
PRKCSH-211ENST00000590098 HNRNPA3P51991 378 aaKnown RBP11.47□□□□□ -0.57
PRKCSH-211ENST00000590098 SLC51BQ86UW2 128 aa11.47□□□□□ -0.57
PRKCSH-211ENST00000590098 CNFNQ9BYD5 112 aa11.47□□□□□ -0.57
PRKCSH-211ENST00000590098 CFAP161Q6P656 301 aa11.46□□□□□ -0.57
PRKCSH-211ENST00000590098 SMIM15Q7Z3B0 74 aa11.46□□□□□ -0.57
PRKCSH-211ENST00000590098 GATD1Q8NB37 220 aa11.46□□□□□ -0.57
PRKCSH-211ENST00000590098 RNASE7Q9H1E1 156 aaKnown RBP11.46□□□□□ -0.57
PRKCSH-211ENST00000590098 TRAV26-2A0A0B4J265 109 aa11.45□□□□□ -0.58
PRKCSH-211ENST00000590098 IGKV3OR2-268A0A0C4DH90 116 aa11.45□□□□□ -0.58
PRKCSH-211ENST00000590098 GAGE12HA6NDE8 117 aa11.45□□□□□ -0.58
PRKCSH-211ENST00000590098 CIRBPQ14011 172 aaKnown RBP11.45□□□□□ -0.58
PRKCSH-211ENST00000590098 AMMECR1LQ6DCA0 310 aa11.45□□□□□ -0.58
PRKCSH-211ENST00000590098 RNF185Q96GF1 192 aa11.45□□□□□ -0.58
PRKCSH-211ENST00000590098 UBR4Q5T4S7 5183 aa11.44□□□□□ -0.58
PRKCSH-211ENST00000590098 K7EN84 100 aa11.44□□□□□ -0.58
PRKCSH-211ENST00000590098 SLPIP03973 132 aa11.44□□□□□ -0.58
PRKCSH-211ENST00000590098 TCTE3Q8IZS6 198 aa11.44□□□□□ -0.58
PRKCSH-211ENST00000590098 OCC1Q8TAD7 63 aa11.44□□□□□ -0.58
PRKCSH-211ENST00000590098 NCR2O95944 276 aa11.43□□□□□ -0.58
PRKCSH-211ENST00000590098 PLA2G2DQ9UNK4 145 aa11.43□□□□□ -0.58
PRKCSH-211ENST00000590098 A0A087WYN8 130 aa11.42□□□□□ -0.58
PRKCSH-211ENST00000590098 CHTF8P0CG12 524 aa11.42□□□□□ -0.58
PRKCSH-211ENST00000590098 RNASEKQ6P5S7 137 aaKnown RBP11.42□□□□□ -0.58
PRKCSH-211ENST00000590098 TEX261Q6UWH6 196 aa11.42□□□□□ -0.58
PRKCSH-211ENST00000590098 RPL39LQ96EH5 51 aaKnown RBP11.42□□□□□ -0.58
PRKCSH-211ENST00000590098 APCSP02743 223 aa11.41□□□□□ -0.58
PRKCSH-211ENST00000590098 Q6ZNX1 250 aa11.41□□□□□ -0.58
PRKCSH-211ENST00000590098 C15orf56Q8N910 161 aa11.41□□□□□ -0.58
PRKCSH-211ENST00000590098 SPACA4Q8TDM5 124 aa11.41□□□□□ -0.58
PRKCSH-211ENST00000590098 GTSF1Q8WW33 167 aa11.41□□□□□ -0.58
PRKCSH-211ENST00000590098 H7C423 109 aa11.4□□□□□ -0.58
PRKCSH-211ENST00000590098 GATCO43716 136 aaKnown RBP11.4□□□□□ -0.58
PRKCSH-211ENST00000590098 RPS10P46783 165 aaKnown RBP11.4□□□□□ -0.58
PRKCSH-211ENST00000590098 Q6ZRU5 148 aa11.4□□□□□ -0.58
PRKCSH-211ENST00000590098 CHCHD10Q8WYQ3 142 aaPredicted RBP11.4□□□□□ -0.58
PRKCSH-211ENST00000590098 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.39□□□□□ -0.59
PRKCSH-211ENST00000590098 IGKV2-29A2NJV5 120 aaPredicted RBP11.39□□□□□ -0.59
PRKCSH-211ENST00000590098 SDHAF1A6NFY7 115 aa11.39□□□□□ -0.59
PRKCSH-211ENST00000590098 FOXA3P55318 350 aaPredicted RBP11.39□□□□□ -0.59
PRKCSH-211ENST00000590098 HIGD2BQ4VC39 106 aa11.39□□□□□ -0.59
PRKCSH-211ENST00000590098 A8MWL6 223 aa11.38□□□□□ -0.59
PRKCSH-211ENST00000590098 TMEM250H0YL14 139 aa11.38□□□□□ -0.59
PRKCSH-211ENST00000590098 FGF6P10767 208 aa11.38□□□□□ -0.59
PRKCSH-211ENST00000590098 PMCHP20382 165 aa11.38□□□□□ -0.59
PRKCSH-211ENST00000590098 COX6A2Q02221 97 aa11.38□□□□□ -0.59
PRKCSH-211ENST00000590098 C7orf33Q8WU49 177 aa11.38□□□□□ -0.59
PRKCSH-211ENST00000590098 I3L3M4 83 aa11.37□□□□□ -0.59
PRKCSH-211ENST00000590098 BORCS7Q96B45 105 aa11.37□□□□□ -0.59
PRKCSH-211ENST00000590098 TMEM101Q96IK0 257 aa11.37□□□□□ -0.59
PRKCSH-211ENST00000590098 BTF3L4Q96K17 158 aa11.37□□□□□ -0.59
PRKCSH-211ENST00000590098 PLAC8Q9NZF1 115 aa11.37□□□□□ -0.59
PRKCSH-211ENST00000590098 NDUFS6O75380 124 aaKnown RBP11.36□□□□□ -0.59
PRKCSH-211ENST00000590098 ZNF25P17030 456 aaPredicted RBP11.36□□□□□ -0.59
PRKCSH-211ENST00000590098 BLOC1S1P78537 153 aa11.36□□□□□ -0.59
PRKCSH-211ENST00000590098 FAM231DQ6ZW35 169 aa11.36□□□□□ -0.59
PRKCSH-211ENST00000590098 GVQW2A0A096LPI5 108 aaPredicted RBP11.35□□□□□ -0.59
PRKCSH-211ENST00000590098 CEBPGP53567 150 aa11.35□□□□□ -0.59
PRKCSH-211ENST00000590098 MAJINQ3KP22 176 aa11.35□□□□□ -0.59
PRKCSH-211ENST00000590098 OR5A1Q8NGJ0 315 aa11.35□□□□□ -0.59
PRKCSH-211ENST00000590098 IGKV2-24A0A0C4DH68 120 aa11.34□□□□□ -0.59
PRKCSH-211ENST00000590098 TRBV6-5A0A0K0K1A5 114 aa11.34□□□□□ -0.59
PRKCSH-211ENST00000590098 PHOX2AO14813 284 aa11.34□□□□□ -0.59
PRKCSH-211ENST00000590098 PRSS3P2Q8NHM4 247 aa11.34□□□□□ -0.59
PRKCSH-211ENST00000590098 MT1HL1P0DM35 61 aa11.33□□□□□ -0.6
PRKCSH-211ENST00000590098 XCL1P47992 114 aa11.33□□□□□ -0.6
PRKCSH-211ENST00000590098 FOXI1Q12951 378 aa11.33□□□□□ -0.6
PRKCSH-211ENST00000590098 CT83Q5H943 113 aa11.33□□□□□ -0.6
PRKCSH-211ENST00000590098 ALKAL2Q6UX46 152 aa11.33□□□□□ -0.6
PRKCSH-211ENST00000590098 ST20Q9HBF5 79 aa11.33□□□□□ -0.6
PRKCSH-211ENST00000590098 FAM231BA6NCW3 169 aa11.32□□□□□ -0.6
PRKCSH-211ENST00000590098 FAM210AQ96ND0 272 aa11.32□□□□□ -0.6
PRKCSH-211ENST00000590098 CCL25O15444 150 aa11.31□□□□□ -0.6
PRKCSH-211ENST00000590098 STPG4Q8N801 248 aa11.31□□□□□ -0.6
PRKCSH-211ENST00000590098 MRAP2Q96G30 205 aa11.31□□□□□ -0.6
PRKCSH-211ENST00000590098 PKIGQ9Y2B9 76 aa11.31□□□□□ -0.6
PRKCSH-211ENST00000590098 IGHV1-58A0A0C4DH39 117 aa11.3□□□□□ -0.6
PRKCSH-211ENST00000590098 LINC00959A0A1B0GUT2 108 aa11.3□□□□□ -0.6
PRKCSH-211ENST00000590098 A0A1B0GUT8 65 aa11.3□□□□□ -0.6
PRKCSH-211ENST00000590098 TSHBP01222 138 aa11.3□□□□□ -0.6
PRKCSH-211ENST00000590098 ESDP10768 282 aa11.3□□□□□ -0.6
PRKCSH-211ENST00000590098 SS18Q15532 418 aa11.3□□□□□ -0.6
PRKCSH-211ENST00000590098 AKAP14Q86UN6 197 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms