RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 IQCJQ1A5X6 159 aa9.33□□□□□ -0.92
VMP1-210ENST00000589823 NTM-AS1Q6ZSK4 140 aa9.33□□□□□ -0.92
VMP1-210ENST00000589823 WFDC10BQ8IUB3 73 aa9.33□□□□□ -0.92
VMP1-210ENST00000589823 CHCHD5Q9BSY4 110 aa9.33□□□□□ -0.92
VMP1-210ENST00000589823 ALKBH7Q9BT30 221 aaPredicted RBP9.33□□□□□ -0.92
VMP1-210ENST00000589823 Q9H8V8 135 aa9.33□□□□□ -0.92
VMP1-210ENST00000589823 LOC389332A0A1B0GUA5 103 aa9.32□□□□□ -0.92
VMP1-210ENST00000589823 PRSS47A8MTI9 375 aa9.32□□□□□ -0.92
VMP1-210ENST00000589823 TMEM243Q9BU79 118 aa9.32□□□□□ -0.92
VMP1-210ENST00000589823 UBE2L6O14933 153 aa9.31□□□□□ -0.92
VMP1-210ENST00000589823 TSHBP01222 138 aa9.31□□□□□ -0.92
VMP1-210ENST00000589823 PKIAP61925 76 aa9.31□□□□□ -0.92
VMP1-210ENST00000589823 SACSQ9NZJ4 4579 aa9.3□□□□□ -0.92
VMP1-210ENST00000589823 IGLV2-18A0A075B6J9 118 aa9.3□□□□□ -0.92
VMP1-210ENST00000589823 TMEM262E9PQX1 116 aa9.3□□□□□ -0.92
VMP1-210ENST00000589823 NIT1Q86X76 327 aa9.3□□□□□ -0.92
VMP1-210ENST00000589823 Q8N8P6 123 aa9.3□□□□□ -0.92
VMP1-210ENST00000589823 NXT2Q9NPJ8 142 aaKnown RBP9.3□□□□□ -0.92
VMP1-210ENST00000589823 DNAH6Q9C0G6 4158 aa9.3□□□□□ -0.92
VMP1-210ENST00000589823 TRAV9-2A0A087WT02 112 aa9.29□□□□□ -0.92
VMP1-210ENST00000589823 A0A087WX48 190 aa9.29□□□□□ -0.92
VMP1-210ENST00000589823 TRGC2P03986 189 aa9.29□□□□□ -0.92
VMP1-210ENST00000589823 DNAH10OSP0CZ25 163 aa9.29□□□□□ -0.92
VMP1-210ENST00000589823 GAGE6Q13070 117 aa9.29□□□□□ -0.92
VMP1-210ENST00000589823 TTC32Q5I0X7 151 aa9.29□□□□□ -0.92
VMP1-210ENST00000589823 LINC01556Q5JQF7 62 aa9.29□□□□□ -0.92
VMP1-210ENST00000589823 PRSS3P2Q8NHM4 247 aa9.29□□□□□ -0.92
VMP1-210ENST00000589823 IGHV3-30P01768 117 aa9.28□□□□□ -0.92
VMP1-210ENST00000589823 IGHV3-33P01772 117 aa9.28□□□□□ -0.92
VMP1-210ENST00000589823 IGHV3-30-3P0DP02 117 aa9.28□□□□□ -0.92
VMP1-210ENST00000589823 IGHV3-30-5P0DP03 117 aa9.28□□□□□ -0.92
VMP1-210ENST00000589823 IFI27P40305 119 aaPredicted RBP9.28□□□□□ -0.92
VMP1-210ENST00000589823 CHCHD7Q9BUK0 85 aa9.28□□□□□ -0.92
VMP1-210ENST00000589823 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.27□□□□□ -0.93
VMP1-210ENST00000589823 IGKV2-29A2NJV5 120 aaPredicted RBP9.27□□□□□ -0.93
VMP1-210ENST00000589823 H7C423 109 aa9.27□□□□□ -0.93
VMP1-210ENST00000589823 K7EMI3 77 aa9.27□□□□□ -0.93
VMP1-210ENST00000589823 K7EP13 123 aa9.27□□□□□ -0.93
VMP1-210ENST00000589823 ESDP10768 282 aa9.27□□□□□ -0.93
VMP1-210ENST00000589823 TMEM18Q96B42 140 aa9.27□□□□□ -0.93
VMP1-210ENST00000589823 NBDYA0A0U1RRE5 68 aa9.26□□□□□ -0.93
VMP1-210ENST00000589823 M0R2N4 97 aa9.26□□□□□ -0.93
VMP1-210ENST00000589823 ORMDL2Q53FV1 153 aa9.26□□□□□ -0.93
VMP1-210ENST00000589823 AMMECR1LQ6DCA0 310 aa9.26□□□□□ -0.93
VMP1-210ENST00000589823 FA2HQ7L5A8 372 aa9.26□□□□□ -0.93
VMP1-210ENST00000589823 C10orf126Q8N4M7 172 aa9.26□□□□□ -0.93
VMP1-210ENST00000589823 C18orf32Q8TCD1 76 aa9.26□□□□□ -0.93
VMP1-210ENST00000589823 KMT2AQ03164 3969 aa9.26□□□□□ -0.93
VMP1-210ENST00000589823 SMAGPQ0VAQ4 97 aa9.25□□□□□ -0.93
VMP1-210ENST00000589823 LAGE3Q14657 143 aa9.25□□□□□ -0.93
VMP1-210ENST00000589823 MPV17L2Q567V2 206 aa9.25□□□□□ -0.93
VMP1-210ENST00000589823 KMT2CQ8NEZ4 4911 aaKnown RBP9.25□□□□□ -0.93
VMP1-210ENST00000589823 HYDINQ4G0P3 5121 aa9.24□□□□□ -0.93
VMP1-210ENST00000589823 FGF6P10767 208 aa9.24□□□□□ -0.93
VMP1-210ENST00000589823 RAB5BP61020 215 aa9.24□□□□□ -0.93
VMP1-210ENST00000589823 RBX1P62877 108 aa9.24□□□□□ -0.93
VMP1-210ENST00000589823 RNASEKQ6P5S7 137 aaKnown RBP9.24□□□□□ -0.93
VMP1-210ENST00000589823 Q8N3U1 123 aa9.24□□□□□ -0.93
VMP1-210ENST00000589823 C20orf203Q8NBC4 194 aa9.24□□□□□ -0.93
VMP1-210ENST00000589823 TMEM101Q96IK0 257 aa9.24□□□□□ -0.93
VMP1-210ENST00000589823 A0A1B0GUV1 79 aa9.23□□□□□ -0.93
VMP1-210ENST00000589823 ANGP03950 147 aaKnown RBP9.23□□□□□ -0.93
VMP1-210ENST00000589823 ZNF25P17030 456 aaPredicted RBP9.23□□□□□ -0.93
VMP1-210ENST00000589823 G0S2P27469 103 aa9.23□□□□□ -0.93
VMP1-210ENST00000589823 Q8N976 141 aa9.23□□□□□ -0.93
VMP1-210ENST00000589823 KLK12Q9UKR0 248 aa9.23□□□□□ -0.93
VMP1-210ENST00000589823 LINC00614P0C842 121 aa9.22□□□□□ -0.93
VMP1-210ENST00000589823 BTF3P20290 206 aaKnown RBP9.22□□□□□ -0.93
VMP1-210ENST00000589823 DGAT2L7PQ6IED9 249 aa9.22□□□□□ -0.93
VMP1-210ENST00000589823 Q6ZR54 194 aa9.22□□□□□ -0.93
VMP1-210ENST00000589823 MRPL52Q86TS9 123 aaKnown RBP9.22□□□□□ -0.93
VMP1-210ENST00000589823 BAGE3Q86Y29 109 aa9.22□□□□□ -0.93
VMP1-210ENST00000589823 AP5S1Q9NUS5 200 aa9.22□□□□□ -0.93
VMP1-210ENST00000589823 CYSLTR1Q9Y271 337 aa9.22□□□□□ -0.93
VMP1-210ENST00000589823 LINC01546A6NGU7 62 aa9.21□□□□□ -0.94
VMP1-210ENST00000589823 IBA57-AS1B1ANH7 110 aa9.21□□□□□ -0.94
VMP1-210ENST00000589823 RPL39P62891 51 aaKnown RBP9.21□□□□□ -0.94
VMP1-210ENST00000589823 OR5A1Q8NGJ0 315 aa9.21□□□□□ -0.94
VMP1-210ENST00000589823 KRTAP1-5Q9BYS1 174 aa9.21□□□□□ -0.94
VMP1-210ENST00000589823 RYR2Q92736 4967 aa9.21□□□□□ -0.94
VMP1-210ENST00000589823 IGLV4-60A0A075B6I1 120 aa9.2□□□□□ -0.94
VMP1-210ENST00000589823 CRPP02741 224 aa9.2□□□□□ -0.94
VMP1-210ENST00000589823 Q0VG73 95 aa9.2□□□□□ -0.94
VMP1-210ENST00000589823 C2orf66Q6UXQ4 117 aa9.2□□□□□ -0.94
VMP1-210ENST00000589823 TIMM21Q9BVV7 248 aa9.2□□□□□ -0.94
VMP1-210ENST00000589823 SPANXA1Q9NS26 97 aa9.2□□□□□ -0.94
VMP1-210ENST00000589823 UBE2D4Q9Y2X8 147 aa9.2□□□□□ -0.94
VMP1-210ENST00000589823 TRAV8-3A0A0A6YYJ7 113 aa9.19□□□□□ -0.94
VMP1-210ENST00000589823 LINC01549A6NIU2 74 aa9.19□□□□□ -0.94
VMP1-210ENST00000589823 C1orf196B1AJZ1 125 aa9.19□□□□□ -0.94
VMP1-210ENST00000589823 LINC00269Q8N2A0 174 aa9.19□□□□□ -0.94
VMP1-210ENST00000589823 UBE2WQ96B02 151 aa9.19□□□□□ -0.94
VMP1-210ENST00000589823 CHCHD1Q96BP2 118 aaKnown RBP9.19□□□□□ -0.94
VMP1-210ENST00000589823 URB1-AS1Q96HZ7 61 aa9.19□□□□□ -0.94
VMP1-210ENST00000589823 Q9HAA7 133 aa9.19□□□□□ -0.94
VMP1-210ENST00000589823 CSDC2Q9Y534 153 aaKnown RBP9.19□□□□□ -0.94
VMP1-210ENST00000589823 C1orf134Q5TEV5 83 aa9.18□□□□□ -0.94
VMP1-210ENST00000589823 NFE4Q86UQ8 179 aa9.18□□□□□ -0.94
VMP1-210ENST00000589823 C6orf223Q8N319 242 aa9.18□□□□□ -0.94
VMP1-210ENST00000589823 TOMM6Q96B49 74 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms