RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 PAX4O43316 350 aa10.85□□□□□ -0.67
RETREG3-208ENST00000589797 DEFB135Q30KP9 77 aa10.85□□□□□ -0.67
RETREG3-208ENST00000589797 NXPH4O95158 308 aa10.84□□□□□ -0.67
RETREG3-208ENST00000589797 DAD1P61803 113 aa10.84□□□□□ -0.67
RETREG3-208ENST00000589797 CST9LQ9H4G1 147 aa10.84□□□□□ -0.67
RETREG3-208ENST00000589797 C5orf38Q86SI9 138 aa10.84□□□□□ -0.67
RETREG3-208ENST00000589797 Q8N976 141 aa10.84□□□□□ -0.67
RETREG3-208ENST00000589797 LINC01006Q8NI28 216 aa10.84□□□□□ -0.67
RETREG3-208ENST00000589797 C12orf74Q32Q52 190 aa10.84□□□□□ -0.67
RETREG3-208ENST00000589797 UTP20O75691 2785 aaKnown RBP10.84□□□□□ -0.67
RETREG3-208ENST00000589797 COL27A1Q8IZC6 1860 aaPredicted RBP10.83□□□□□ -0.67
RETREG3-208ENST00000589797 TMEM243Q9BU79 118 aa10.83□□□□□ -0.68
RETREG3-208ENST00000589797 SNCGO76070 127 aa10.83□□□□□ -0.68
RETREG3-208ENST00000589797 DNAL4O96015 105 aa10.83□□□□□ -0.68
RETREG3-208ENST00000589797 CFAP161Q6P656 301 aa10.83□□□□□ -0.68
RETREG3-208ENST00000589797 IGLV10-54A0A075B6I4 117 aa10.83□□□□□ -0.68
RETREG3-208ENST00000589797 TAX1BP3O14907 124 aa10.83□□□□□ -0.68
RETREG3-208ENST00000589797 BOD1L2Q8IYS8 172 aa10.83□□□□□ -0.68
RETREG3-208ENST00000589797 LINC00482Q8N8I6 264 aa10.83□□□□□ -0.68
RETREG3-208ENST00000589797 MRAPQ8TCY5 172 aa10.82□□□□□ -0.68
RETREG3-208ENST00000589797 MRPL52Q86TS9 123 aaKnown RBP10.82□□□□□ -0.68
RETREG3-208ENST00000589797 CRLF1O75462 422 aa10.82□□□□□ -0.68
RETREG3-208ENST00000589797 MAPKAPK5-AS1Q8N8E1 139 aa10.82□□□□□ -0.68
RETREG3-208ENST00000589797 TOMM6Q96B49 74 aa10.82□□□□□ -0.68
RETREG3-208ENST00000589797 PSMG3-AS1Q96PY0 264 aa10.82□□□□□ -0.68
RETREG3-208ENST00000589797 C9JAW5 83 aa10.82□□□□□ -0.68
RETREG3-208ENST00000589797 FGF6P10767 208 aa10.82□□□□□ -0.68
RETREG3-208ENST00000589797 XCL1P47992 114 aa10.82□□□□□ -0.68
RETREG3-208ENST00000589797 NRACQ8N912 160 aa10.82□□□□□ -0.68
RETREG3-208ENST00000589797 A0A1W2PPM0 123 aa10.81□□□□□ -0.68
RETREG3-208ENST00000589797 CKS1BP61024 79 aa10.81□□□□□ -0.68
RETREG3-208ENST00000589797 NBEAL2Q6ZNJ1 2754 aa10.81□□□□□ -0.68
RETREG3-208ENST00000589797 TMEM89A2RUT3 159 aa10.81□□□□□ -0.68
RETREG3-208ENST00000589797 MORN3Q6PF18 240 aaPredicted RBP10.81□□□□□ -0.68
RETREG3-208ENST00000589797 ITPR2Q14571 2701 aa10.8□□□□□ -0.68
RETREG3-208ENST00000589797 GTSF1LQ9H1H1 148 aa10.8□□□□□ -0.68
RETREG3-208ENST00000589797 OCIAD2Q56VL3 154 aa10.79□□□□□ -0.68
RETREG3-208ENST00000589797 C20orf203Q8NBC4 194 aa10.79□□□□□ -0.68
RETREG3-208ENST00000589797 SH2D6Q7Z4S9 175 aa10.79□□□□□ -0.68
RETREG3-208ENST00000589797 LRRC75A-AS1Q8N1F1 130 aa10.79□□□□□ -0.68
RETREG3-208ENST00000589797 ANGP03950 147 aaKnown RBP10.78□□□□□ -0.68
RETREG3-208ENST00000589797 GYPEP15421 78 aa10.78□□□□□ -0.68
RETREG3-208ENST00000589797 Q9H8V8 135 aa10.78□□□□□ -0.68
RETREG3-208ENST00000589797 DCHS2Q6V1P9 2916 aa10.78□□□□□ -0.68
RETREG3-208ENST00000589797 A8MZ25 164 aa10.78□□□□□ -0.68
RETREG3-208ENST00000589797 RHOHQ15669 191 aa10.78□□□□□ -0.68
RETREG3-208ENST00000589797 KLLNB2CW77 178 aa10.77□□□□□ -0.68
RETREG3-208ENST00000589797 LGALS9O00182 355 aa10.77□□□□□ -0.68
RETREG3-208ENST00000589797 M0QY20 66 aa10.77□□□□□ -0.69
RETREG3-208ENST00000589797 LY6G6DO95868 133 aa10.77□□□□□ -0.69
RETREG3-208ENST00000589797 UNC79Q9P2D8 2635 aa10.77□□□□□ -0.69
RETREG3-208ENST00000589797 U3KQK5 164 aa10.77□□□□□ -0.69
RETREG3-208ENST00000589797 NBEAL1Q6ZS30 2694 aa10.77□□□□□ -0.69
RETREG3-208ENST00000589797 TRBV7-3A0A075B6L6 115 aa10.77□□□□□ -0.69
RETREG3-208ENST00000589797 A0A096LNJ9 63 aa10.77□□□□□ -0.69
RETREG3-208ENST00000589797 CRPP02741 224 aa10.77□□□□□ -0.69
RETREG3-208ENST00000589797 Q6ZUT4 128 aa10.77□□□□□ -0.69
RETREG3-208ENST00000589797 A4D1N5 150 aa10.76□□□□□ -0.69
RETREG3-208ENST00000589797 RNASE8Q8TDE3 154 aaKnown RBP10.76□□□□□ -0.69
RETREG3-208ENST00000589797 NOTCH1P46531 2555 aa10.76□□□□□ -0.69
RETREG3-208ENST00000589797 DPH3Q96FX2 82 aa10.76□□□□□ -0.69
RETREG3-208ENST00000589797 PLA2G2AP14555 144 aa10.75□□□□□ -0.69
RETREG3-208ENST00000589797 PRO1854Q9UHT4 67 aa10.75□□□□□ -0.69
RETREG3-208ENST00000589797 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.75□□□□□ -0.69
RETREG3-208ENST00000589797 K7EP34 96 aa10.75□□□□□ -0.69
RETREG3-208ENST00000589797 SIVA1O15304 175 aa10.75□□□□□ -0.69
RETREG3-208ENST00000589797 CRYGDP07320 174 aa10.75□□□□□ -0.69
RETREG3-208ENST00000589797 MUSTN1Q8IVN3 82 aa10.75□□□□□ -0.69
RETREG3-208ENST00000589797 MED14OSP0DP75 135 aa10.74□□□□□ -0.69
RETREG3-208ENST00000589797 K7EQD1 137 aa10.74□□□□□ -0.69
RETREG3-208ENST00000589797 LINC00467Q9BRT7 94 aa10.73□□□□□ -0.69
RETREG3-208ENST00000589797 IGLL5B9A064 214 aa10.73□□□□□ -0.69
RETREG3-208ENST00000589797 E9PLD3 99 aa10.73□□□□□ -0.69
RETREG3-208ENST00000589797 WFDC2Q14508 124 aa10.73□□□□□ -0.69
RETREG3-208ENST00000589797 SS18Q15532 418 aa10.73□□□□□ -0.69
RETREG3-208ENST00000589797 COPS9Q8WXC6 57 aa10.73□□□□□ -0.69
RETREG3-208ENST00000589797 NEXN-AS1Q8NBZ9 246 aa10.73□□□□□ -0.69
RETREG3-208ENST00000589797 STAB1Q9NY15 2570 aa10.73□□□□□ -0.69
RETREG3-208ENST00000589797 SETXQ7Z333 2677 aaKnown RBP10.72□□□□□ -0.69
RETREG3-208ENST00000589797 ODF3L2Q3SX64 289 aa10.72□□□□□ -0.69
RETREG3-208ENST00000589797 HHLA3Q9XRX5 114 aa10.72□□□□□ -0.69
RETREG3-208ENST00000589797 NF1P21359 2839 aa10.72□□□□□ -0.69
RETREG3-208ENST00000589797 C2orf82Q6UX34 121 aa10.72□□□□□ -0.69
RETREG3-208ENST00000589797 CNFNQ9BYD5 112 aa10.72□□□□□ -0.69
RETREG3-208ENST00000589797 LOC100131303A0A0U1RQF7 123 aa10.72□□□□□ -0.69
RETREG3-208ENST00000589797 SOCS3O14543 225 aa10.72□□□□□ -0.69
RETREG3-208ENST00000589797 TIMM17AQ99595 171 aa10.72□□□□□ -0.69
RETREG3-208ENST00000589797 TRAV12-1A0A0B4J245 112 aa10.71□□□□□ -0.69
RETREG3-208ENST00000589797 CFAP126Q5VTH2 177 aa10.71□□□□□ -0.69
RETREG3-208ENST00000589797 C2orf91Q6ZV80 131 aa10.71□□□□□ -0.69
RETREG3-208ENST00000589797 CDKN2A-AS1Q9UH64 79 aa10.71□□□□□ -0.7
RETREG3-208ENST00000589797 COL6A5A8TX70 2615 aa10.7□□□□□ -0.7
RETREG3-208ENST00000589797 IGHV3-30-3P0DP02 117 aa10.7□□□□□ -0.7
RETREG3-208ENST00000589797 TMEM86BQ8N661 226 aa10.7□□□□□ -0.7
RETREG3-208ENST00000589797 ATP6V0E2Q8NHE4 81 aa10.7□□□□□ -0.7
RETREG3-208ENST00000589797 SMG1Q96Q15 3661 aaKnown RBP10.7□□□□□ -0.7
RETREG3-208ENST00000589797 SLC25A29Q8N8R3 303 aa10.7□□□□□ -0.7
RETREG3-208ENST00000589797 TMEM263Q8WUH6 116 aaKnown RBP10.7□□□□□ -0.7
RETREG3-208ENST00000589797 C16orf74Q96GX8 76 aa10.7□□□□□ -0.7
RETREG3-208ENST00000589797 TEX48A0A1B0GUV7 120 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms