RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 LINC00612Q8N6U2 182 aa4.04□□□□□ -1.76
VPS25-204ENST00000589577 C14orf178Q8N769 122 aaPredicted RBP4.04□□□□□ -1.76
VPS25-204ENST00000589577 RPL36ALQ969Q0 106 aaKnown RBP4.04□□□□□ -1.76
VPS25-204ENST00000589577 MRAP2Q96G30 205 aa4.04□□□□□ -1.76
VPS25-204ENST00000589577 VSIG2Q96IQ7 327 aa4.04□□□□□ -1.76
VPS25-204ENST00000589577 MSRB1Q9NZV6 116 aa4.04□□□□□ -1.76
VPS25-204ENST00000589577 PRO0255Q9UI72 69 aa4.04□□□□□ -1.76
VPS25-204ENST00000589577 TRBV24-1A0A075B6N3 115 aa4.03□□□□□ -1.76
VPS25-204ENST00000589577 IGHV3-73A0A0B4J1V6 119 aa4.03□□□□□ -1.76
VPS25-204ENST00000589577 TRBV10-1A0A0K0K1A3 114 aa4.03□□□□□ -1.76
VPS25-204ENST00000589577 TRBV6-4A0A1B0GX49 114 aa4.03□□□□□ -1.76
VPS25-204ENST00000589577 K7EQD1 137 aa4.03□□□□□ -1.76
VPS25-204ENST00000589577 PAX4O43316 350 aa4.03□□□□□ -1.76
VPS25-204ENST00000589577 EVI2AP22794 236 aa4.03□□□□□ -1.76
VPS25-204ENST00000589577 CKS2P33552 79 aa4.03□□□□□ -1.76
VPS25-204ENST00000589577 LINC01620Q4KN68 170 aa4.03□□□□□ -1.76
VPS25-204ENST00000589577 CBLN2Q8IUK8 224 aa4.03□□□□□ -1.76
VPS25-204ENST00000589577 CIRBP-AS1Q8TBR5 109 aa4.03□□□□□ -1.76
VPS25-204ENST00000589577 GNB1LQ9BYB4 327 aa4.03□□□□□ -1.76
VPS25-204ENST00000589577 HHLA3Q9XRX5 114 aa4.03□□□□□ -1.76
VPS25-204ENST00000589577 TRAPPC1Q9Y5R8 145 aa4.03□□□□□ -1.76
VPS25-204ENST00000589577 A0A1B0GXF2 115 aa4.02□□□□□ -1.77
VPS25-204ENST00000589577 APCSP02743 223 aa4.02□□□□□ -1.77
VPS25-204ENST00000589577 SRIP30626 198 aa4.02□□□□□ -1.77
VPS25-204ENST00000589577 RPS10P46783 165 aaKnown RBP4.02□□□□□ -1.77
VPS25-204ENST00000589577 FABP9Q0Z7S8 132 aa4.02□□□□□ -1.77
VPS25-204ENST00000589577 WFDC2Q14508 124 aa4.02□□□□□ -1.77
VPS25-204ENST00000589577 ELOBQ15370 118 aa4.02□□□□□ -1.77
VPS25-204ENST00000589577 MRPL23Q16540 153 aaKnown RBP4.02□□□□□ -1.77
VPS25-204ENST00000589577 OR10J3Q5JRS4 329 aa4.02□□□□□ -1.77
VPS25-204ENST00000589577 FAM104BQ5XKR9 115 aa4.02□□□□□ -1.77
VPS25-204ENST00000589577 ATRAIDQ6UW56 229 aa4.02□□□□□ -1.77
VPS25-204ENST00000589577 AMN1Q8IY45 258 aa4.02□□□□□ -1.77
VPS25-204ENST00000589577 ORMDL3Q8N138 153 aa4.02□□□□□ -1.77
VPS25-204ENST00000589577 ZNF479Q96JC4 524 aa4.02□□□□□ -1.77
VPS25-204ENST00000589577 DNAJC30Q96LL9 226 aa4.02□□□□□ -1.77
VPS25-204ENST00000589577 CHAC1Q9BUX1 264 aa4.02□□□□□ -1.77
VPS25-204ENST00000589577 JPT2Q9H910 190 aa4.02□□□□□ -1.77
VPS25-204ENST00000589577 LAMTOR2Q9Y2Q5 125 aa4.02□□□□□ -1.77
VPS25-204ENST00000589577 ICOSQ9Y6W8 199 aa4.02□□□□□ -1.77
VPS25-204ENST00000589577 TGIF2-C20orf24A0A0A6YYL0 155 aa4.01□□□□□ -1.77
VPS25-204ENST00000589577 TCAPO15273 167 aa4.01□□□□□ -1.77
VPS25-204ENST00000589577 CRYGDP07320 174 aa4.01□□□□□ -1.77
VPS25-204ENST00000589577 GYPEP15421 78 aa4.01□□□□□ -1.77
VPS25-204ENST00000589577 GATA1P15976 413 aaPredicted RBP4.01□□□□□ -1.77
VPS25-204ENST00000589577 TMEM97Q5BJF2 176 aa4.01□□□□□ -1.77
VPS25-204ENST00000589577 TMEM136Q6ZRR5 245 aa4.01□□□□□ -1.77
VPS25-204ENST00000589577 WFDC10BQ8IUB3 73 aa4.01□□□□□ -1.77
VPS25-204ENST00000589577 MRPL18Q9H0U6 180 aaKnown RBP4.01□□□□□ -1.77
VPS25-204ENST00000589577 ST20Q9HBF5 79 aa4.01□□□□□ -1.77
VPS25-204ENST00000589577 NIT2Q9NQR4 276 aa4.01□□□□□ -1.77
VPS25-204ENST00000589577 TRBV7-3A0A075B6L6 115 aa4□□□□□ -1.77
VPS25-204ENST00000589577 D6R8Y8 96 aa4□□□□□ -1.77
VPS25-204ENST00000589577 PHOX2AO14813 284 aa4□□□□□ -1.77
VPS25-204ENST00000589577 RAB4AP20338 218 aa4□□□□□ -1.77
VPS25-204ENST00000589577 RAB5AP20339 215 aa4□□□□□ -1.77
VPS25-204ENST00000589577 PMCHP20382 165 aa4□□□□□ -1.77
VPS25-204ENST00000589577 FCER1GP30273 86 aa4□□□□□ -1.77
VPS25-204ENST00000589577 CRYBA4P53673 196 aa4□□□□□ -1.77
VPS25-204ENST00000589577 RPL37AP61513 92 aaKnown RBP4□□□□□ -1.77
VPS25-204ENST00000589577 SMAGPQ0VAQ4 97 aa4□□□□□ -1.77
VPS25-204ENST00000589577 COTL1Q14019 142 aa4□□□□□ -1.77
VPS25-204ENST00000589577 FHL2Q14192 279 aa4□□□□□ -1.77
VPS25-204ENST00000589577 SUMO4Q6EEV6 95 aa4□□□□□ -1.77
VPS25-204ENST00000589577 NEGR1Q7Z3B1 354 aa4□□□□□ -1.77
VPS25-204ENST00000589577 DAZ4Q86SG3 579 aaKnown RBP4□□□□□ -1.77
VPS25-204ENST00000589577 SLC25A29Q8N8R3 303 aa4□□□□□ -1.77
VPS25-204ENST00000589577 GATD1Q8NB37 220 aa4□□□□□ -1.77
VPS25-204ENST00000589577 PRELID3AQ96N28 172 aa4□□□□□ -1.77
VPS25-204ENST00000589577 KIR2DL4Q99706 377 aa4□□□□□ -1.77
VPS25-204ENST00000589577 SAMD10Q9BYL1 202 aa4□□□□□ -1.77
VPS25-204ENST00000589577 MAP1LC3AQ9H492 121 aa4□□□□□ -1.77
VPS25-204ENST00000589577 DAZ3Q9NR90 486 aaKnown RBP4□□□□□ -1.77
VPS25-204ENST00000589577 CRCT1Q9UGL9 99 aa4□□□□□ -1.77
VPS25-204ENST00000589577 TRAV26-2A0A0B4J265 109 aa3.99□□□□□ -1.77
VPS25-204ENST00000589577 GAGE12JA6NER3 117 aa3.99□□□□□ -1.77
VPS25-204ENST00000589577 C1orf196B1AJZ1 125 aa3.99□□□□□ -1.77
VPS25-204ENST00000589577 SCO1O75880 301 aa3.99□□□□□ -1.77
VPS25-204ENST00000589577 NCR2O95944 276 aa3.99□□□□□ -1.77
VPS25-204ENST00000589577 G0S2P27469 103 aa3.99□□□□□ -1.77
VPS25-204ENST00000589577 RAB5BP61020 215 aa3.99□□□□□ -1.77
VPS25-204ENST00000589577 PKIAP61925 76 aa3.99□□□□□ -1.77
VPS25-204ENST00000589577 SUMO2P61956 95 aaKnown RBP3.99□□□□□ -1.77
VPS25-204ENST00000589577 GAGE1Q13065 139 aa3.99□□□□□ -1.77
VPS25-204ENST00000589577 GAGE4Q13068 117 aa3.99□□□□□ -1.77
VPS25-204ENST00000589577 GAGE5Q13069 117 aa3.99□□□□□ -1.77
VPS25-204ENST00000589577 MRPL51Q4U2R6 128 aaKnown RBP3.99□□□□□ -1.77
VPS25-204ENST00000589577 GAGE13Q4V321 117 aa3.99□□□□□ -1.77
VPS25-204ENST00000589577 LYPD5Q6UWN5 251 aa3.99□□□□□ -1.77
VPS25-204ENST00000589577 ATP6V0E2Q8NHE4 81 aa3.99□□□□□ -1.77
VPS25-204ENST00000589577 TMEM18Q96B42 140 aa3.99□□□□□ -1.77
VPS25-204ENST00000589577 C20orf78Q9BR46 151 aa3.99□□□□□ -1.77
VPS25-204ENST00000589577 NXT2Q9NPJ8 142 aaKnown RBP3.99□□□□□ -1.77
VPS25-204ENST00000589577 TRAV9-2A0A087WT02 112 aa3.98□□□□□ -1.77
VPS25-204ENST00000589577 TRAV8-6A0A0B4J262 113 aa3.98□□□□□ -1.77
VPS25-204ENST00000589577 SDHAF1A6NFY7 115 aa3.98□□□□□ -1.77
VPS25-204ENST00000589577 M0QY20 66 aa3.98□□□□□ -1.77
VPS25-204ENST00000589577 VCYO14598 125 aa3.98□□□□□ -1.77
VPS25-204ENST00000589577 UBE2L6O14933 153 aa3.98□□□□□ -1.77
VPS25-204ENST00000589577 PSCAO43653 123 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms