RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 GATD1Q8NB37 220 aa13.56□□□□□ -0.24
NEDD4L-225ENST00000589054 PGLYRP4Q96LB8 373 aa13.56□□□□□ -0.24
NEDD4L-225ENST00000589054 DPH3P1Q9H4G8 78 aa13.56□□□□□ -0.24
NEDD4L-225ENST00000589054 TRAV8-4A0A0B4J246 113 aa13.55□□□□□ -0.24
NEDD4L-225ENST00000589054 TRAV26-2A0A0B4J265 109 aa13.55□□□□□ -0.24
NEDD4L-225ENST00000589054 K7EN84 100 aa13.55□□□□□ -0.24
NEDD4L-225ENST00000589054 CTRLP40313 264 aa13.55□□□□□ -0.24
NEDD4L-225ENST00000589054 FOXA3P55318 350 aaPredicted RBP13.55□□□□□ -0.24
NEDD4L-225ENST00000589054 Q6ZNX1 250 aa13.55□□□□□ -0.24
NEDD4L-225ENST00000589054 C15orf56Q8N910 161 aa13.55□□□□□ -0.24
NEDD4L-225ENST00000589054 SMIM12Q96EX1 92 aa13.55□□□□□ -0.24
NEDD4L-225ENST00000589054 TNXBP22105 4242 aa13.54□□□□□ -0.24
NEDD4L-225ENST00000589054 A0A087WYN8 130 aa13.53□□□□□ -0.24
NEDD4L-225ENST00000589054 PDE6DO43924 150 aa13.53□□□□□ -0.24
NEDD4L-225ENST00000589054 TRGC1P0CF51 173 aa13.53□□□□□ -0.24
NEDD4L-225ENST00000589054 BCL2P10415 239 aa13.53□□□□□ -0.24
NEDD4L-225ENST00000589054 CNFNQ9BYD5 112 aa13.53□□□□□ -0.24
NEDD4L-225ENST00000589054 RNASE7Q9H1E1 156 aaKnown RBP13.53□□□□□ -0.24
NEDD4L-225ENST00000589054 AMTP48728 403 aa13.52□□□□□ -0.25
NEDD4L-225ENST00000589054 WDR73Q6P4I2 378 aa13.52□□□□□ -0.25
NEDD4L-225ENST00000589054 OCC1Q8TAD7 63 aa13.52□□□□□ -0.25
NEDD4L-225ENST00000589054 RPL39LQ96EH5 51 aaKnown RBP13.52□□□□□ -0.25
NEDD4L-225ENST00000589054 PLA2G2DQ9UNK4 145 aa13.52□□□□□ -0.25
NEDD4L-225ENST00000589054 XKRY2A2RUG3 117 aa13.51□□□□□ -0.25
NEDD4L-225ENST00000589054 GAGE12HA6NDE8 117 aa13.51□□□□□ -0.25
NEDD4L-225ENST00000589054 COTL1Q14019 142 aa13.51□□□□□ -0.25
NEDD4L-225ENST00000589054 TWIST1Q15672 202 aa13.51□□□□□ -0.25
NEDD4L-225ENST00000589054 GTSF1Q8WW33 167 aa13.51□□□□□ -0.25
NEDD4L-225ENST00000589054 IGHV3-64A0A075B6Q5 118 aa13.5□□□□□ -0.25
NEDD4L-225ENST00000589054 SPACA4Q8TDM5 124 aa13.5□□□□□ -0.25
NEDD4L-225ENST00000589054 hCG_2014768A0A024R1R8 64 aa13.49□□□□□ -0.25
NEDD4L-225ENST00000589054 IGKV3OR2-268A0A0C4DH90 116 aa13.49□□□□□ -0.25
NEDD4L-225ENST00000589054 RPP21Q9H633 154 aaKnown RBP13.49□□□□□ -0.25
NEDD4L-225ENST00000589054 UBE2L6O14933 153 aa13.48□□□□□ -0.25
NEDD4L-225ENST00000589054 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.47□□□□□ -0.25
NEDD4L-225ENST00000589054 IGKV2-29A2NJV5 120 aaPredicted RBP13.47□□□□□ -0.25
NEDD4L-225ENST00000589054 TEX46H3BTG2 121 aa13.47□□□□□ -0.25
NEDD4L-225ENST00000589054 GAS8-AS1O95177 125 aa13.47□□□□□ -0.25
NEDD4L-225ENST00000589054 HIGD2BQ4VC39 106 aa13.47□□□□□ -0.25
NEDD4L-225ENST00000589054 EIF5AL1Q6IS14 154 aaKnown RBP13.47□□□□□ -0.25
NEDD4L-225ENST00000589054 TCTE3Q8IZS6 198 aa13.47□□□□□ -0.25
NEDD4L-225ENST00000589054 AP5S1Q9NUS5 200 aa13.47□□□□□ -0.25
NEDD4L-225ENST00000589054 COX6A2Q02221 97 aa13.46□□□□□ -0.25
NEDD4L-225ENST00000589054 PRSS3P2Q8NHM4 247 aa13.46□□□□□ -0.25
NEDD4L-225ENST00000589054 DPH3Q96FX2 82 aa13.46□□□□□ -0.25
NEDD4L-225ENST00000589054 BIN3Q9NQY0 253 aa13.46□□□□□ -0.25
NEDD4L-225ENST00000589054 PLAC8Q9NZF1 115 aa13.46□□□□□ -0.25
NEDD4L-225ENST00000589054 FAM231BA6NCW3 169 aa13.45□□□□□ -0.26
NEDD4L-225ENST00000589054 Q6ZRU5 148 aa13.45□□□□□ -0.26
NEDD4L-225ENST00000589054 CHCHD10Q8WYQ3 142 aaPredicted RBP13.45□□□□□ -0.26
NEDD4L-225ENST00000589054 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.44□□□□□ -0.26
NEDD4L-225ENST00000589054 AKAP14Q86UN6 197 aa13.44□□□□□ -0.26
NEDD4L-225ENST00000589054 SLC51BQ86UW2 128 aa13.44□□□□□ -0.26
NEDD4L-225ENST00000589054 RNF185Q96GF1 192 aa13.44□□□□□ -0.26
NEDD4L-225ENST00000589054 PHOX2AO14813 284 aa13.43□□□□□ -0.26
NEDD4L-225ENST00000589054 SDHAF1A6NFY7 115 aa13.41□□□□□ -0.26
NEDD4L-225ENST00000589054 FGF6P10767 208 aa13.41□□□□□ -0.26
NEDD4L-225ENST00000589054 RPS10P46783 165 aaKnown RBP13.41□□□□□ -0.26
NEDD4L-225ENST00000589054 FOXI1Q12951 378 aa13.41□□□□□ -0.26
NEDD4L-225ENST00000589054 RNASEKQ6P5S7 137 aaKnown RBP13.41□□□□□ -0.26
NEDD4L-225ENST00000589054 ODF1Q14990 250 aa13.4□□□□□ -0.26
NEDD4L-225ENST00000589054 LINC00526Q96FQ7 95 aa13.4□□□□□ -0.26
NEDD4L-225ENST00000589054 LRP2P98164 4655 aa13.4□□□□□ -0.26
NEDD4L-225ENST00000589054 IGKV2-24A0A0C4DH68 120 aa13.39□□□□□ -0.27
NEDD4L-225ENST00000589054 NCR2O95944 276 aa13.39□□□□□ -0.27
NEDD4L-225ENST00000589054 AMMECR1LQ6DCA0 310 aa13.39□□□□□ -0.27
NEDD4L-225ENST00000589054 CFAP161Q6P656 301 aa13.39□□□□□ -0.27
NEDD4L-225ENST00000589054 GVQW2A0A096LPI5 108 aaPredicted RBP13.38□□□□□ -0.27
NEDD4L-225ENST00000589054 GATCO43716 136 aaKnown RBP13.38□□□□□ -0.27
NEDD4L-225ENST00000589054 NDUFS6O75380 124 aaKnown RBP13.38□□□□□ -0.27
NEDD4L-225ENST00000589054 APCSP02743 223 aa13.38□□□□□ -0.27
NEDD4L-225ENST00000589054 MAJINQ3KP22 176 aa13.38□□□□□ -0.27
NEDD4L-225ENST00000589054 A0A096LNI7 61 aa13.37□□□□□ -0.27
NEDD4L-225ENST00000589054 TSHBP01222 138 aa13.37□□□□□ -0.27
NEDD4L-225ENST00000589054 ESDP10768 282 aa13.37□□□□□ -0.27
NEDD4L-225ENST00000589054 TAGLN2P37802 199 aaKnown RBP13.37□□□□□ -0.27
NEDD4L-225ENST00000589054 TRBV6-5A0A0K0K1A5 114 aa13.36□□□□□ -0.27
NEDD4L-225ENST00000589054 H7C423 109 aa13.36□□□□□ -0.27
NEDD4L-225ENST00000589054 FAM231DQ6ZW35 169 aa13.36□□□□□ -0.27
NEDD4L-225ENST00000589054 LINC00959A0A1B0GUT2 108 aa13.35□□□□□ -0.27
NEDD4L-225ENST00000589054 XCL1P47992 114 aa13.35□□□□□ -0.27
NEDD4L-225ENST00000589054 STPG4Q8N801 248 aa13.35□□□□□ -0.27
NEDD4L-225ENST00000589054 OR5A1Q8NGJ0 315 aa13.35□□□□□ -0.27
NEDD4L-225ENST00000589054 LYPD6BQ8NI32 183 aa13.35□□□□□ -0.27
NEDD4L-225ENST00000589054 A0A1B0GVG6 124 aa13.34□□□□□ -0.27
NEDD4L-225ENST00000589054 TMEM250H0YL14 139 aa13.34□□□□□ -0.27
NEDD4L-225ENST00000589054 I3L3M4 83 aa13.34□□□□□ -0.27
NEDD4L-225ENST00000589054 PMCHP20382 165 aa13.34□□□□□ -0.27
NEDD4L-225ENST00000589054 ALKAL2Q6UX46 152 aa13.34□□□□□ -0.27
NEDD4L-225ENST00000589054 TMEM242Q9NWH2 141 aa13.34□□□□□ -0.27
NEDD4L-225ENST00000589054 CCL25O15444 150 aa13.33□□□□□ -0.28
NEDD4L-225ENST00000589054 PRR3P79522 188 aaKnown RBP13.33□□□□□ -0.28
NEDD4L-225ENST00000589054 SMIM15Q7Z3B0 74 aa13.33□□□□□ -0.28
NEDD4L-225ENST00000589054 A8MWL6 223 aa13.32□□□□□ -0.28
NEDD4L-225ENST00000589054 POLR2KP53803 58 aaKnown RBP13.32□□□□□ -0.28
NEDD4L-225ENST00000589054 TEX261Q6UWH6 196 aa13.32□□□□□ -0.28
NEDD4L-225ENST00000589054 CEBPGP53567 150 aa13.31□□□□□ -0.28
NEDD4L-225ENST00000589054 C7orf33Q8WU49 177 aa13.31□□□□□ -0.28
NEDD4L-225ENST00000589054 ZNF25P17030 456 aaPredicted RBP13.3□□□□□ -0.28
NEDD4L-225ENST00000589054 RAB4AP20338 218 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms