RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 C10orf126Q8N4M7 172 aa13.35□□□□□ -0.27
CIRBP-220ENST00000588917 CHCHD7Q9BUK0 85 aa13.35□□□□□ -0.27
CIRBP-220ENST00000588917 BTF3P20290 206 aaKnown RBP13.34□□□□□ -0.27
CIRBP-220ENST00000588917 KIR2DL4Q99706 377 aa13.34□□□□□ -0.27
CIRBP-220ENST00000588917 CHCHD5Q9BSY4 110 aa13.34□□□□□ -0.27
CIRBP-220ENST00000588917 A0A087WX48 190 aa13.33□□□□□ -0.28
CIRBP-220ENST00000588917 TMEM262E9PQX1 116 aa13.33□□□□□ -0.28
CIRBP-220ENST00000588917 AMTP48728 403 aa13.33□□□□□ -0.28
CIRBP-220ENST00000588917 TMEM243Q9BU79 118 aa13.33□□□□□ -0.28
CIRBP-220ENST00000588917 FRAS1Q86XX4 4008 aa13.32□□□□□ -0.28
CIRBP-220ENST00000588917 PRSS47A8MTI9 375 aa13.32□□□□□ -0.28
CIRBP-220ENST00000588917 M0R2N4 97 aa13.32□□□□□ -0.28
CIRBP-220ENST00000588917 Q6ZR54 194 aa13.32□□□□□ -0.28
CIRBP-220ENST00000588917 NIT1Q86X76 327 aa13.32□□□□□ -0.28
CIRBP-220ENST00000588917 MRPL18Q9H0U6 180 aaKnown RBP13.32□□□□□ -0.28
CIRBP-220ENST00000588917 KMT2AQ03164 3969 aa13.31□□□□□ -0.28
CIRBP-220ENST00000588917 UBE2L6O14933 153 aa13.31□□□□□ -0.28
CIRBP-220ENST00000588917 NPYP01303 97 aa13.31□□□□□ -0.28
CIRBP-220ENST00000588917 S100A1P23297 94 aa13.31□□□□□ -0.28
CIRBP-220ENST00000588917 FCER1GP30273 86 aa13.31□□□□□ -0.28
CIRBP-220ENST00000588917 FABP9Q0Z7S8 132 aa13.31□□□□□ -0.28
CIRBP-220ENST00000588917 YPEL4Q96NS1 127 aa13.31□□□□□ -0.28
CIRBP-220ENST00000588917 MAP1LC3AQ9H492 121 aa13.31□□□□□ -0.28
CIRBP-220ENST00000588917 TRAPPC1Q9Y5R8 145 aa13.31□□□□□ -0.28
CIRBP-220ENST00000588917 H7C423 109 aa13.3□□□□□ -0.28
CIRBP-220ENST00000588917 CBLN2Q8IUK8 224 aa13.3□□□□□ -0.28
CIRBP-220ENST00000588917 SMIM2Q9BVW6 85 aa13.29□□□□□ -0.28
CIRBP-220ENST00000588917 TSHBP01222 138 aa13.28□□□□□ -0.28
CIRBP-220ENST00000588917 IGHV3-30P01768 117 aa13.28□□□□□ -0.28
CIRBP-220ENST00000588917 IGHV3-33P01772 117 aa13.28□□□□□ -0.28
CIRBP-220ENST00000588917 IGHV3-30-3P0DP02 117 aa13.28□□□□□ -0.28
CIRBP-220ENST00000588917 IGHV3-30-5P0DP03 117 aa13.28□□□□□ -0.28
CIRBP-220ENST00000588917 KIAA1644Q3SXP7 199 aa13.28□□□□□ -0.28
CIRBP-220ENST00000588917 RAB5AP20339 215 aa13.27□□□□□ -0.29
CIRBP-220ENST00000588917 SMAGPQ0VAQ4 97 aa13.27□□□□□ -0.29
CIRBP-220ENST00000588917 C1orf134Q5TEV5 83 aa13.27□□□□□ -0.29
CIRBP-220ENST00000588917 DEFB104AQ8WTQ1 72 aa13.27□□□□□ -0.29
CIRBP-220ENST00000588917 A0A1B0GUV1 79 aa13.26□□□□□ -0.29
CIRBP-220ENST00000588917 IBA57-AS1B1ANH7 110 aa13.26□□□□□ -0.29
CIRBP-220ENST00000588917 K7EMI3 77 aa13.26□□□□□ -0.29
CIRBP-220ENST00000588917 GAGE6Q13070 117 aa13.26□□□□□ -0.29
CIRBP-220ENST00000588917 NFE4Q86UQ8 179 aa13.26□□□□□ -0.29
CIRBP-220ENST00000588917 TMEM18Q96B42 140 aa13.26□□□□□ -0.29
CIRBP-220ENST00000588917 ALKBH7Q9BT30 221 aaPredicted RBP13.26□□□□□ -0.29
CIRBP-220ENST00000588917 KRTAP17-1Q9BYP8 105 aa13.26□□□□□ -0.29
CIRBP-220ENST00000588917 LOC389332A0A1B0GUA5 103 aa13.25□□□□□ -0.29
CIRBP-220ENST00000588917 ESDP10768 282 aa13.25□□□□□ -0.29
CIRBP-220ENST00000588917 LAGE3Q14657 143 aa13.25□□□□□ -0.29
CIRBP-220ENST00000588917 NXT2Q9NPJ8 142 aaKnown RBP13.25□□□□□ -0.29
CIRBP-220ENST00000588917 AMMECR1LQ6DCA0 310 aa13.24□□□□□ -0.29
CIRBP-220ENST00000588917 C6orf223Q8N319 242 aa13.24□□□□□ -0.29
CIRBP-220ENST00000588917 Q8N8P6 123 aa13.24□□□□□ -0.29
CIRBP-220ENST00000588917 TRAV8-3A0A0A6YYJ7 113 aa13.23□□□□□ -0.29
CIRBP-220ENST00000588917 RBX1P62877 108 aa13.23□□□□□ -0.29
CIRBP-220ENST00000588917 MPV17L2Q567V2 206 aa13.23□□□□□ -0.29
CIRBP-220ENST00000588917 KRTAP1-5Q9BYS1 174 aa13.23□□□□□ -0.29
CIRBP-220ENST00000588917 ANGP03950 147 aaKnown RBP13.22□□□□□ -0.29
CIRBP-220ENST00000588917 ZNF25P17030 456 aaPredicted RBP13.22□□□□□ -0.29
CIRBP-220ENST00000588917 G0S2P27469 103 aa13.22□□□□□ -0.29
CIRBP-220ENST00000588917 PRSS3P2Q8NHM4 247 aa13.22□□□□□ -0.29
CIRBP-220ENST00000588917 TMEM101Q96IK0 257 aa13.22□□□□□ -0.29
CIRBP-220ENST00000588917 COLCA2A8K830 154 aa13.21□□□□□ -0.29
CIRBP-220ENST00000588917 ATP6V1G1O75348 118 aa13.21□□□□□ -0.29
CIRBP-220ENST00000588917 Q0VG73 95 aa13.21□□□□□ -0.29
CIRBP-220ENST00000588917 ORMDL2Q53FV1 153 aa13.21□□□□□ -0.29
CIRBP-220ENST00000588917 KLK12Q9UKR0 248 aa13.21□□□□□ -0.29
CIRBP-220ENST00000588917 DNAH6Q9C0G6 4158 aa13.21□□□□□ -0.3
CIRBP-220ENST00000588917 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.2□□□□□ -0.3
CIRBP-220ENST00000588917 IGKV2-29A2NJV5 120 aaPredicted RBP13.2□□□□□ -0.3
CIRBP-220ENST00000588917 FGF6P10767 208 aa13.2□□□□□ -0.3
CIRBP-220ENST00000588917 Q8N976 141 aa13.2□□□□□ -0.3
CIRBP-220ENST00000588917 IFI27P40305 119 aaPredicted RBP13.19□□□□□ -0.3
CIRBP-220ENST00000588917 DGAT2L7PQ6IED9 249 aa13.19□□□□□ -0.3
CIRBP-220ENST00000588917 RNASEKQ6P5S7 137 aaKnown RBP13.19□□□□□ -0.3
CIRBP-220ENST00000588917 MRPL52Q86TS9 123 aaKnown RBP13.19□□□□□ -0.3
CIRBP-220ENST00000588917 Q8N3U1 123 aa13.19□□□□□ -0.3
CIRBP-220ENST00000588917 C20orf203Q8NBC4 194 aa13.19□□□□□ -0.3
CIRBP-220ENST00000588917 RMI2Q96E14 147 aa13.19□□□□□ -0.3
CIRBP-220ENST00000588917 COX11Q9Y6N1 276 aa13.19□□□□□ -0.3
CIRBP-220ENST00000588917 CRPP02741 224 aa13.18□□□□□ -0.3
CIRBP-220ENST00000588917 LINC00336Q6ZUF6 198 aa13.18□□□□□ -0.3
CIRBP-220ENST00000588917 TM2D2Q9BX73 214 aa13.18□□□□□ -0.3
CIRBP-220ENST00000588917 CSDC2Q9Y534 153 aaKnown RBP13.18□□□□□ -0.3
CIRBP-220ENST00000588917 DNAH10Q8IVF4 4471 aa13.17□□□□□ -0.3
CIRBP-220ENST00000588917 SCO1O75880 301 aa13.17□□□□□ -0.3
CIRBP-220ENST00000588917 UBE2WQ96B02 151 aa13.17□□□□□ -0.3
CIRBP-220ENST00000588917 TIMM21Q9BVV7 248 aa13.17□□□□□ -0.3
CIRBP-220ENST00000588917 HERC2O95714 4834 aa13.17□□□□□ -0.3
CIRBP-220ENST00000588917 RAB5BP61020 215 aa13.16□□□□□ -0.3
CIRBP-220ENST00000588917 LINC00269Q8N2A0 174 aa13.16□□□□□ -0.3
CIRBP-220ENST00000588917 OR5A1Q8NGJ0 315 aa13.16□□□□□ -0.3
CIRBP-220ENST00000588917 IGLV4-60A0A075B6I1 120 aa13.15□□□□□ -0.3
CIRBP-220ENST00000588917 LINC01549A6NIU2 74 aa13.15□□□□□ -0.3
CIRBP-220ENST00000588917 MIAQ16674 131 aa13.15□□□□□ -0.3
CIRBP-220ENST00000588917 FA2HQ7L5A8 372 aa13.15□□□□□ -0.3
CIRBP-220ENST00000588917 Q9HAA7 133 aa13.15□□□□□ -0.3
CIRBP-220ENST00000588917 PRR34Q9NV39 138 aa13.15□□□□□ -0.3
CIRBP-220ENST00000588917 TRGC2P03986 189 aa13.14□□□□□ -0.31
CIRBP-220ENST00000588917 REG3AQ06141 175 aa13.14□□□□□ -0.31
CIRBP-220ENST00000588917 C18orf32Q8TCD1 76 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms