RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 GATCO43716 136 aaKnown RBP12.49□□□□□ -0.41
CCDC130-209ENST00000588809 FOXA3P55318 350 aaPredicted RBP12.49□□□□□ -0.41
CCDC130-209ENST00000588809 REG3AQ06141 175 aa12.49□□□□□ -0.41
CCDC130-209ENST00000588809 SCXQ7RTU7 201 aa12.49□□□□□ -0.41
CCDC130-209ENST00000588809 COTL1Q14019 142 aa12.48□□□□□ -0.41
CCDC130-209ENST00000588809 FAM210AQ96ND0 272 aa12.48□□□□□ -0.41
CCDC130-209ENST00000588809 CHAC1Q9BUX1 264 aa12.48□□□□□ -0.41
CCDC130-209ENST00000588809 IGLV4-60A0A075B6I1 120 aa12.47□□□□□ -0.41
CCDC130-209ENST00000588809 TRAV8-4A0A0B4J246 113 aa12.47□□□□□ -0.41
CCDC130-209ENST00000588809 TRAV26-2A0A0B4J265 109 aa12.47□□□□□ -0.41
CCDC130-209ENST00000588809 PRSS1P07477 247 aa12.47□□□□□ -0.41
CCDC130-209ENST00000588809 TEX261Q6UWH6 196 aa12.47□□□□□ -0.41
CCDC130-209ENST00000588809 SMIM15Q7Z3B0 74 aa12.47□□□□□ -0.41
CCDC130-209ENST00000588809 LINC01551Q86U37 167 aa12.47□□□□□ -0.41
CCDC130-209ENST00000588809 SMIM7Q9BQ49 75 aa12.47□□□□□ -0.41
CCDC130-209ENST00000588809 EIF5A2Q9GZV4 153 aaKnown RBP12.47□□□□□ -0.41
CCDC130-209ENST00000588809 AMTP48728 403 aa12.46□□□□□ -0.41
CCDC130-209ENST00000588809 CEBPGP53567 150 aa12.46□□□□□ -0.41
CCDC130-209ENST00000588809 DGAT2L7PQ6IED9 249 aa12.46□□□□□ -0.41
CCDC130-209ENST00000588809 LINC00528Q8N1L1 170 aa12.46□□□□□ -0.41
CCDC130-209ENST00000588809 GFRA4Q9GZZ7 299 aa12.46□□□□□ -0.41
CCDC130-209ENST00000588809 A0A1B0GVG6 124 aa12.45□□□□□ -0.42
CCDC130-209ENST00000588809 PLA2G1BP04054 148 aaKnown RBP12.45□□□□□ -0.42
CCDC130-209ENST00000588809 UBE2L6O14933 153 aa12.44□□□□□ -0.42
CCDC130-209ENST00000588809 NCR2O95944 276 aa12.44□□□□□ -0.42
CCDC130-209ENST00000588809 SRP19P09132 144 aaKnown RBP12.44□□□□□ -0.42
CCDC130-209ENST00000588809 DEFB104AQ8WTQ1 72 aa12.44□□□□□ -0.42
CCDC130-209ENST00000588809 RPL39LQ96EH5 51 aaKnown RBP12.44□□□□□ -0.42
CCDC130-209ENST00000588809 IGLV10-54A0A075B6I4 117 aa12.43□□□□□ -0.42
CCDC130-209ENST00000588809 FAM231BA6NCW3 169 aa12.43□□□□□ -0.42
CCDC130-209ENST00000588809 ZNF727A8MUV8 499 aa12.43□□□□□ -0.42
CCDC130-209ENST00000588809 CIRBP-AS1Q8TBR5 109 aa12.43□□□□□ -0.42
CCDC130-209ENST00000588809 TSKUQ8WUA8 353 aa12.43□□□□□ -0.42
CCDC130-209ENST00000588809 OSTCQ9NRP0 149 aa12.43□□□□□ -0.42
CCDC130-209ENST00000588809 C9orf163Q8N9P6 203 aa12.42□□□□□ -0.42
CCDC130-209ENST00000588809 CLRN3Q8NCR9 226 aa12.42□□□□□ -0.42
CCDC130-209ENST00000588809 TRBV6-5A0A0K0K1A5 114 aa12.41□□□□□ -0.42
CCDC130-209ENST00000588809 A0A1B0GUT8 65 aa12.41□□□□□ -0.42
CCDC130-209ENST00000588809 SDHAF1A6NFY7 115 aa12.41□□□□□ -0.42
CCDC130-209ENST00000588809 HIGD1CA8MV81 97 aa12.41□□□□□ -0.42
CCDC130-209ENST00000588809 BORCS7Q96B45 105 aa12.41□□□□□ -0.42
CCDC130-209ENST00000588809 H7C423 109 aa12.4□□□□□ -0.42
CCDC130-209ENST00000588809 TMEM191AQ9H0A3 160 aa12.4□□□□□ -0.42
CCDC130-209ENST00000588809 CNBPP62633 177 aaKnown RBP12.39□□□□□ -0.43
CCDC130-209ENST00000588809 PKHD1L1Q86WI1 4243 aa12.38□□□□□ -0.43
CCDC130-209ENST00000588809 APCSP02743 223 aa12.38□□□□□ -0.43
CCDC130-209ENST00000588809 KRTAP10-4P60372 401 aaPredicted RBP12.38□□□□□ -0.43
CCDC130-209ENST00000588809 FAM74A3Q4VXF1 159 aa12.38□□□□□ -0.43
CCDC130-209ENST00000588809 V9GYV3 84 aa12.38□□□□□ -0.43
CCDC130-209ENST00000588809 I3L3M4 83 aa12.37□□□□□ -0.43
CCDC130-209ENST00000588809 ISOC2Q96AB3 205 aa12.37□□□□□ -0.43
CCDC130-209ENST00000588809 GAS8-AS1O95177 125 aa12.36□□□□□ -0.43
CCDC130-209ENST00000588809 RNF185Q96GF1 192 aa12.36□□□□□ -0.43
CCDC130-209ENST00000588809 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.35□□□□□ -0.43
CCDC130-209ENST00000588809 hDV102S1A0JD36 115 aa12.35□□□□□ -0.43
CCDC130-209ENST00000588809 IGKV2-29A2NJV5 120 aaPredicted RBP12.35□□□□□ -0.43
CCDC130-209ENST00000588809 FGF6P10767 208 aa12.35□□□□□ -0.43
CCDC130-209ENST00000588809 ZNF25P17030 456 aaPredicted RBP12.35□□□□□ -0.43
CCDC130-209ENST00000588809 RAB4AP20338 218 aa12.35□□□□□ -0.43
CCDC130-209ENST00000588809 TMEM241Q24JQ0 296 aa12.35□□□□□ -0.43
CCDC130-209ENST00000588809 AMMECR1LQ6DCA0 310 aa12.35□□□□□ -0.43
CCDC130-209ENST00000588809 SDIM1Q6ZPB5 146 aa12.35□□□□□ -0.43
CCDC130-209ENST00000588809 MRAP2Q96G30 205 aa12.35□□□□□ -0.43
CCDC130-209ENST00000588809 LRP1Q07954 4544 aaKnown RBP12.35□□□□□ -0.43
CCDC130-209ENST00000588809 TSHBP01222 138 aa12.34□□□□□ -0.43
CCDC130-209ENST00000588809 ESDP10768 282 aa12.34□□□□□ -0.43
CCDC130-209ENST00000588809 RPL23P62829 140 aaKnown RBP12.34□□□□□ -0.43
CCDC130-209ENST00000588809 NUP35Q8NFH5 326 aa12.34□□□□□ -0.43
CCDC130-209ENST00000588809 ST20Q9HBF5 79 aa12.34□□□□□ -0.43
CCDC130-209ENST00000588809 TRBV27A0A0K0K1C4 114 aa12.33□□□□□ -0.44
CCDC130-209ENST00000588809 C9JQL5 133 aa12.33□□□□□ -0.44
CCDC130-209ENST00000588809 PMCHP20382 165 aa12.33□□□□□ -0.44
CCDC130-209ENST00000588809 RPS10P46783 165 aaKnown RBP12.33□□□□□ -0.44
CCDC130-209ENST00000588809 POLR2KP53803 58 aaKnown RBP12.33□□□□□ -0.44
CCDC130-209ENST00000588809 RNASEKQ6P5S7 137 aaKnown RBP12.33□□□□□ -0.44
CCDC130-209ENST00000588809 C15orf56Q8N910 161 aa12.33□□□□□ -0.44
CCDC130-209ENST00000588809 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.33□□□□□ -0.44
CCDC130-209ENST00000588809 GAGE12HA6NDE8 117 aa12.32□□□□□ -0.44
CCDC130-209ENST00000588809 SLPIP03973 132 aa12.32□□□□□ -0.44
CCDC130-209ENST00000588809 RIGQ13278 110 aa12.32□□□□□ -0.44
CCDC130-209ENST00000588809 CIRBPQ14011 172 aaKnown RBP12.32□□□□□ -0.44
CCDC130-209ENST00000588809 AMN1Q8IY45 258 aa12.32□□□□□ -0.44
CCDC130-209ENST00000588809 SMDT1Q9H4I9 107 aa12.32□□□□□ -0.44
CCDC130-209ENST00000588809 AP5S1Q9NUS5 200 aa12.32□□□□□ -0.44
CCDC130-209ENST00000588809 NAT8Q9UHE5 227 aa12.32□□□□□ -0.44
CCDC130-209ENST00000588809 FAT3Q8TDW7 4589 aa12.31□□□□□ -0.44
CCDC130-209ENST00000588809 PANO1I0J062 215 aa12.31□□□□□ -0.44
CCDC130-209ENST00000588809 NAT8BQ9UHF3 227 aa12.31□□□□□ -0.44
CCDC130-209ENST00000588809 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.3□□□□□ -0.44
CCDC130-209ENST00000588809 IGKV3OR2-268A0A0C4DH90 116 aa12.3□□□□□ -0.44
CCDC130-209ENST00000588809 SRSF3P84103 164 aaKnown RBP12.3□□□□□ -0.44
CCDC130-209ENST00000588809 ADIRFQ15847 76 aa12.3□□□□□ -0.44
CCDC130-209ENST00000588809 CFAP161Q6P656 301 aa12.3□□□□□ -0.44
CCDC130-209ENST00000588809 OR5A1Q8NGJ0 315 aa12.3□□□□□ -0.44
CCDC130-209ENST00000588809 CHCHD10Q8WYQ3 142 aaPredicted RBP12.3□□□□□ -0.44
CCDC130-209ENST00000588809 TMEM242Q9NWH2 141 aa12.3□□□□□ -0.44
CCDC130-209ENST00000588809 IGHV3-64A0A075B6Q5 118 aa12.29□□□□□ -0.44
CCDC130-209ENST00000588809 SMIM27A0A1W2PRY6 76 aa12.29□□□□□ -0.44
CCDC130-209ENST00000588809 KRTAP29-1A8MX34 341 aaPredicted RBP12.29□□□□□ -0.44
CCDC130-209ENST00000588809 PEA15Q15121 130 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms