RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 SPAG8Q99932 426 aaPredicted RBP10.36□□□□□ -0.75
NEDD4L-223ENST00000588516 JPT2Q9H910 190 aa10.36□□□□□ -0.75
NEDD4L-223ENST00000588516 MRPL16Q9NX20 251 aaKnown RBP10.36□□□□□ -0.75
NEDD4L-223ENST00000588516 TNFRSF18Q9Y5U5 241 aa10.36□□□□□ -0.75
NEDD4L-223ENST00000588516 TRBV20-1A0A075B6N2 111 aa10.35□□□□□ -0.75
NEDD4L-223ENST00000588516 TRAV12-2A0A075B6T6 113 aa10.35□□□□□ -0.75
NEDD4L-223ENST00000588516 J3QQQ9 107 aa10.35□□□□□ -0.75
NEDD4L-223ENST00000588516 IGKV3-20P01619 116 aa10.35□□□□□ -0.75
NEDD4L-223ENST00000588516 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.35□□□□□ -0.75
NEDD4L-223ENST00000588516 C4orf3Q8WVX3 66 aa10.35□□□□□ -0.75
NEDD4L-223ENST00000588516 TRAV25A0A0B4J276 109 aa10.34□□□□□ -0.75
NEDD4L-223ENST00000588516 A0A0J9YY99 117 aa10.34□□□□□ -0.75
NEDD4L-223ENST00000588516 CMC4P56277 68 aaPredicted RBP10.34□□□□□ -0.75
NEDD4L-223ENST00000588516 C3orf56Q8N813 242 aa10.34□□□□□ -0.75
NEDD4L-223ENST00000588516 TMEM238C9JI98 176 aa10.33□□□□□ -0.76
NEDD4L-223ENST00000588516 H3BMM0 161 aa10.33□□□□□ -0.76
NEDD4L-223ENST00000588516 EDN2P20800 178 aa10.33□□□□□ -0.76
NEDD4L-223ENST00000588516 RPL39P62891 51 aaKnown RBP10.33□□□□□ -0.76
NEDD4L-223ENST00000588516 SMAGPQ0VAQ4 97 aa10.33□□□□□ -0.76
NEDD4L-223ENST00000588516 ATP6V0E2Q8NHE4 81 aa10.33□□□□□ -0.76
NEDD4L-223ENST00000588516 DYNLRB2Q8TF09 96 aa10.33□□□□□ -0.76
NEDD4L-223ENST00000588516 DUX3Q96PT4 197 aa10.33□□□□□ -0.76
NEDD4L-223ENST00000588516 SPANXA1Q9NS26 97 aa10.33□□□□□ -0.76
NEDD4L-223ENST00000588516 PGPEP1Q9NXJ5 209 aa10.33□□□□□ -0.76
NEDD4L-223ENST00000588516 SVEP1Q4LDE5 3571 aa10.33□□□□□ -0.76
NEDD4L-223ENST00000588516 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.33□□□□□ -0.76
NEDD4L-223ENST00000588516 TMEM223A0PJW6 202 aa10.33□□□□□ -0.76
NEDD4L-223ENST00000588516 SAP30O75446 220 aa10.33□□□□□ -0.76
NEDD4L-223ENST00000588516 DEFB131AP59861 70 aa10.33□□□□□ -0.76
NEDD4L-223ENST00000588516 INSP01308 110 aa10.32□□□□□ -0.76
NEDD4L-223ENST00000588516 MORN3Q6PF18 240 aaPredicted RBP10.32□□□□□ -0.76
NEDD4L-223ENST00000588516 C10orf99Q6UWK7 81 aa10.32□□□□□ -0.76
NEDD4L-223ENST00000588516 SCGB1A1P11684 91 aa10.31□□□□□ -0.76
NEDD4L-223ENST00000588516 PKD1L1Q8TDX9 2849 aa10.3□□□□□ -0.76
NEDD4L-223ENST00000588516 AGRNO00468 2067 aa10.3□□□□□ -0.76
NEDD4L-223ENST00000588516 IGLV4-3A0A075B6K6 122 aa10.3□□□□□ -0.76
NEDD4L-223ENST00000588516 H3BMG7 143 aa10.3□□□□□ -0.76
NEDD4L-223ENST00000588516 IGHV3-30P01768 117 aa10.3□□□□□ -0.76
NEDD4L-223ENST00000588516 IGHV3-30-5P0DP03 117 aa10.3□□□□□ -0.76
NEDD4L-223ENST00000588516 NDUFA11Q86Y39 141 aa10.3□□□□□ -0.76
NEDD4L-223ENST00000588516 KLHL30-AS1Q8NEE0 82 aa10.3□□□□□ -0.76
NEDD4L-223ENST00000588516 ZNRF2Q8NHG8 242 aa10.3□□□□□ -0.76
NEDD4L-223ENST00000588516 PRO1854Q9UHT4 67 aa10.3□□□□□ -0.76
NEDD4L-223ENST00000588516 TEX48A0A1B0GUV7 120 aa10.29□□□□□ -0.76
NEDD4L-223ENST00000588516 P0DMU3 169 aa10.29□□□□□ -0.76
NEDD4L-223ENST00000588516 FAM231AP0DMU4 169 aa10.29□□□□□ -0.76
NEDD4L-223ENST00000588516 FAM231CP0DMU5 169 aa10.29□□□□□ -0.76
NEDD4L-223ENST00000588516 CD28P10747 220 aa10.29□□□□□ -0.76
NEDD4L-223ENST00000588516 BEAN1Q3B7T3 259 aa10.29□□□□□ -0.76
NEDD4L-223ENST00000588516 AMELXQ99217 191 aa10.29□□□□□ -0.76
NEDD4L-223ENST00000588516 SELENOKQ9Y6D0 94 aa10.29□□□□□ -0.76
NEDD4L-223ENST00000588516 KNCNA6PVL3 124 aa10.28□□□□□ -0.76
NEDD4L-223ENST00000588516 ZNF22P17026 224 aaPredicted RBP10.28□□□□□ -0.76
NEDD4L-223ENST00000588516 SLURP1P55000 103 aa10.28□□□□□ -0.76
NEDD4L-223ENST00000588516 UBE2D3P61077 147 aa10.28□□□□□ -0.76
NEDD4L-223ENST00000588516 UBE2D2P62837 147 aa10.28□□□□□ -0.76
NEDD4L-223ENST00000588516 HIST2H2BDQ6DRA6 164 aa10.28□□□□□ -0.76
NEDD4L-223ENST00000588516 C10orf126Q8N4M7 172 aa10.28□□□□□ -0.76
NEDD4L-223ENST00000588516 LINC01587Q99440 93 aa10.28□□□□□ -0.76
NEDD4L-223ENST00000588516 A0A0B4J2C4 111 aa10.27□□□□□ -0.77
NEDD4L-223ENST00000588516 LOC107984156A0A0G2JMH3 177 aa10.27□□□□□ -0.77
NEDD4L-223ENST00000588516 TINCRA0A1B0GVN0 87 aa10.27□□□□□ -0.77
NEDD4L-223ENST00000588516 TSPAN13O95857 204 aa10.27□□□□□ -0.77
NEDD4L-223ENST00000588516 IGHV3-53P01767 116 aa10.27□□□□□ -0.77
NEDD4L-223ENST00000588516 MRPS36P82909 103 aaKnown RBP10.27□□□□□ -0.77
NEDD4L-223ENST00000588516 WFDC2Q14508 124 aa10.27□□□□□ -0.77
NEDD4L-223ENST00000588516 C21orf62-AS1Q17RA5 79 aa10.27□□□□□ -0.77
NEDD4L-223ENST00000588516 ARL17AQ8IVW1 177 aa10.27□□□□□ -0.77
NEDD4L-223ENST00000588516 SIGMAR1Q99720 223 aa10.27□□□□□ -0.77
NEDD4L-223ENST00000588516 TIMM21Q9BVV7 248 aa10.27□□□□□ -0.77
NEDD4L-223ENST00000588516 M0QXV9 152 aa10.26□□□□□ -0.77
NEDD4L-223ENST00000588516 RS1O15537 224 aa10.26□□□□□ -0.77
NEDD4L-223ENST00000588516 APOMO95445 188 aa10.26□□□□□ -0.77
NEDD4L-223ENST00000588516 EMP1P54849 157 aa10.26□□□□□ -0.77
NEDD4L-223ENST00000588516 DEFB114Q30KQ6 69 aa10.26□□□□□ -0.77
NEDD4L-223ENST00000588516 MAP6D1Q9H9H5 199 aa10.26□□□□□ -0.77
NEDD4L-223ENST00000588516 PRO0461Q9UI25 63 aa10.26□□□□□ -0.77
NEDD4L-223ENST00000588516 NOTCH1P46531 2555 aa10.25□□□□□ -0.77
NEDD4L-223ENST00000588516 CIDEAO60543 219 aa10.25□□□□□ -0.77
NEDD4L-223ENST00000588516 SCGB1C2P0DMR2 95 aa10.25□□□□□ -0.77
NEDD4L-223ENST00000588516 PSMB2P49721 201 aa10.25□□□□□ -0.77
NEDD4L-223ENST00000588516 TMEM61Q8N0U2 210 aa10.25□□□□□ -0.77
NEDD4L-223ENST00000588516 COPS9Q8WXC6 57 aa10.25□□□□□ -0.77
NEDD4L-223ENST00000588516 RNF183Q96D59 192 aa10.25□□□□□ -0.77
NEDD4L-223ENST00000588516 ERG28Q9UKR5 140 aa10.25□□□□□ -0.77
NEDD4L-223ENST00000588516 TENM1Q9UKZ4 2725 aa10.24□□□□□ -0.77
NEDD4L-223ENST00000588516 A0A0J9YXV3 536 aa10.24□□□□□ -0.77
NEDD4L-223ENST00000588516 CFC1BP0CG36 223 aa10.24□□□□□ -0.77
NEDD4L-223ENST00000588516 CFC1P0CG37 223 aa10.24□□□□□ -0.77
NEDD4L-223ENST00000588516 KHDC1LQ5JSQ8 128 aa10.24□□□□□ -0.77
NEDD4L-223ENST00000588516 CFAP126Q5VTH2 177 aa10.24□□□□□ -0.77
NEDD4L-223ENST00000588516 C1QTNF4Q9BXJ3 329 aa10.24□□□□□ -0.77
NEDD4L-223ENST00000588516 IGHV1-58A0A0C4DH39 117 aa10.23□□□□□ -0.77
NEDD4L-223ENST00000588516 TIMM17BO60830 172 aa10.23□□□□□ -0.77
NEDD4L-223ENST00000588516 HTN1P15515 57 aa10.23□□□□□ -0.77
NEDD4L-223ENST00000588516 TSPEAR-AS2P59090 65 aa10.23□□□□□ -0.77
NEDD4L-223ENST00000588516 ETDBQ3ZM63 59 aa10.23□□□□□ -0.77
NEDD4L-223ENST00000588516 STHQ8IWL8 128 aa10.23□□□□□ -0.77
NEDD4L-223ENST00000588516 GEMIN7Q9H840 131 aaKnown RBP10.23□□□□□ -0.77
NEDD4L-223ENST00000588516 TRBV10-1A0A0K0K1A3 114 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms