RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 COTL1Q14019 142 aa7.43□□□□□ -1.22
CHMP1B-202ENST00000588284 TMEM97Q5BJF2 176 aa7.43□□□□□ -1.22
CHMP1B-202ENST00000588284 PYY3Q5JQD4 70 aa7.43□□□□□ -1.22
CHMP1B-202ENST00000588284 SPATA12Q7Z6I5 190 aa7.43□□□□□ -1.22
CHMP1B-202ENST00000588284 LINC00518Q8N0U6 118 aa7.43□□□□□ -1.22
CHMP1B-202ENST00000588284 TOMM6Q96B49 74 aa7.43□□□□□ -1.22
CHMP1B-202ENST00000588284 IFI27L1Q96BM0 104 aa7.43□□□□□ -1.22
CHMP1B-202ENST00000588284 TM2D3Q9BRN9 247 aa7.43□□□□□ -1.22
CHMP1B-202ENST00000588284 ZMAT4Q9H898 229 aa7.43□□□□□ -1.22
CHMP1B-202ENST00000588284 CYSLTR1Q9Y271 337 aa7.43□□□□□ -1.22
CHMP1B-202ENST00000588284 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.42□□□□□ -1.22
CHMP1B-202ENST00000588284 SYS1-DBNDD2H3BUS1 97 aa7.42□□□□□ -1.22
CHMP1B-202ENST00000588284 TSHBP01222 138 aa7.42□□□□□ -1.22
CHMP1B-202ENST00000588284 CRYBA4P53673 196 aa7.42□□□□□ -1.22
CHMP1B-202ENST00000588284 UBE2D3P61077 147 aa7.42□□□□□ -1.22
CHMP1B-202ENST00000588284 UBE2D2P62837 147 aa7.42□□□□□ -1.22
CHMP1B-202ENST00000588284 C2orf66Q6UXQ4 117 aa7.42□□□□□ -1.22
CHMP1B-202ENST00000588284 NEGR1Q7Z3B1 354 aa7.42□□□□□ -1.22
CHMP1B-202ENST00000588284 SCGB3A1Q96QR1 104 aa7.42□□□□□ -1.22
CHMP1B-202ENST00000588284 RETNQ9HD89 108 aa7.42□□□□□ -1.22
CHMP1B-202ENST00000588284 NACAE9PAV3 2078 aa7.41□□□□□ -1.22
CHMP1B-202ENST00000588284 GAGE12JA6NER3 117 aa7.41□□□□□ -1.22
CHMP1B-202ENST00000588284 PAX4O43316 350 aa7.41□□□□□ -1.22
CHMP1B-202ENST00000588284 PRSS1P07477 247 aa7.41□□□□□ -1.22
CHMP1B-202ENST00000588284 S100A12P80511 92 aa7.41□□□□□ -1.22
CHMP1B-202ENST00000588284 SMAGPQ0VAQ4 97 aa7.41□□□□□ -1.22
CHMP1B-202ENST00000588284 GAGE1Q13065 139 aa7.41□□□□□ -1.22
CHMP1B-202ENST00000588284 GAGE4Q13068 117 aa7.41□□□□□ -1.22
CHMP1B-202ENST00000588284 GAGE5Q13069 117 aa7.41□□□□□ -1.22
CHMP1B-202ENST00000588284 GAGE13Q4V321 117 aa7.41□□□□□ -1.22
CHMP1B-202ENST00000588284 ERASQ7Z444 233 aa7.41□□□□□ -1.22
CHMP1B-202ENST00000588284 C20orf203Q8NBC4 194 aa7.41□□□□□ -1.22
CHMP1B-202ENST00000588284 MRAPQ8TCY5 172 aa7.41□□□□□ -1.22
CHMP1B-202ENST00000588284 TMEM141Q96I45 108 aa7.41□□□□□ -1.22
CHMP1B-202ENST00000588284 C12orf57Q99622 126 aa7.41□□□□□ -1.22
CHMP1B-202ENST00000588284 MGAM2Q2M2H8 2515 aa7.41□□□□□ -1.22
CHMP1B-202ENST00000588284 PAPPA-AS1Q5QFB9 102 aa7.4□□□□□ -1.22
CHMP1B-202ENST00000588284 Q6ZN92 141 aa7.4□□□□□ -1.22
CHMP1B-202ENST00000588284 LINC00173Q6ZV60 143 aa7.4□□□□□ -1.22
CHMP1B-202ENST00000588284 SH2D6Q7Z4S9 175 aa7.4□□□□□ -1.22
CHMP1B-202ENST00000588284 PHLDA1Q8WV24 401 aaPredicted RBP7.4□□□□□ -1.22
CHMP1B-202ENST00000588284 GTSF1LQ9H1H1 148 aa7.4□□□□□ -1.22
CHMP1B-202ENST00000588284 Q9UF83 564 aa7.4□□□□□ -1.22
CHMP1B-202ENST00000588284 CELA1Q9UNI1 258 aa7.4□□□□□ -1.22
CHMP1B-202ENST00000588284 F5H768 121 aa7.39□□□□□ -1.23
CHMP1B-202ENST00000588284 NPSP0C0P6 89 aa7.39□□□□□ -1.23
CHMP1B-202ENST00000588284 C12orf74Q32Q52 190 aa7.39□□□□□ -1.23
CHMP1B-202ENST00000588284 LGALS9CQ6DKI2 356 aa7.39□□□□□ -1.23
CHMP1B-202ENST00000588284 C11orf45Q8TAV5 145 aa7.39□□□□□ -1.23
CHMP1B-202ENST00000588284 TIMM17AQ99595 171 aa7.39□□□□□ -1.23
CHMP1B-202ENST00000588284 NOTCH1P46531 2555 aa7.39□□□□□ -1.23
CHMP1B-202ENST00000588284 IGHV3-38A0A0C4DH36 116 aa7.38□□□□□ -1.23
CHMP1B-202ENST00000588284 A0A0J9YWU9 116 aa7.38□□□□□ -1.23
CHMP1B-202ENST00000588284 GYPEP15421 78 aa7.38□□□□□ -1.23
CHMP1B-202ENST00000588284 ATP6V0E2Q8NHE4 81 aa7.38□□□□□ -1.23
CHMP1B-202ENST00000588284 B9D2Q9BPU9 175 aa7.38□□□□□ -1.23
CHMP1B-202ENST00000588284 PYGO1Q9Y3Y4 419 aa7.38□□□□□ -1.23
CHMP1B-202ENST00000588284 TRRAPQ9Y4A5 3859 aa7.38□□□□□ -1.23
CHMP1B-202ENST00000588284 TRAV12-1A0A0B4J245 112 aa7.37□□□□□ -1.23
CHMP1B-202ENST00000588284 IGIPA6NJ69 53 aa7.37□□□□□ -1.23
CHMP1B-202ENST00000588284 H3BNG1 76 aa7.37□□□□□ -1.23
CHMP1B-202ENST00000588284 H7C423 109 aa7.37□□□□□ -1.23
CHMP1B-202ENST00000588284 NHLRC4P0CG21 123 aaPredicted RBP7.37□□□□□ -1.23
CHMP1B-202ENST00000588284 HTN3P15516 51 aa7.37□□□□□ -1.23
CHMP1B-202ENST00000588284 MRPL23Q16540 153 aaKnown RBP7.37□□□□□ -1.23
CHMP1B-202ENST00000588284 LINC01545Q5VT33 79 aa7.37□□□□□ -1.23
CHMP1B-202ENST00000588284 Q8N976 141 aa7.37□□□□□ -1.23
CHMP1B-202ENST00000588284 CHCHD7Q9BUK0 85 aa7.37□□□□□ -1.23
CHMP1B-202ENST00000588284 TIMM21Q9BVV7 248 aa7.37□□□□□ -1.23
CHMP1B-202ENST00000588284 TRBV25-1A0A075B6N4 114 aa7.36□□□□□ -1.23
CHMP1B-202ENST00000588284 TRAV26-1A0A087WT03 109 aa7.36□□□□□ -1.23
CHMP1B-202ENST00000588284 LOC100131303A0A0U1RQF7 123 aa7.36□□□□□ -1.23
CHMP1B-202ENST00000588284 H0Y8G0 127 aa7.36□□□□□ -1.23
CHMP1B-202ENST00000588284 LINC00694P0DN24 101 aa7.36□□□□□ -1.23
CHMP1B-202ENST00000588284 DGAT2L7PQ6IED9 249 aa7.36□□□□□ -1.23
CHMP1B-202ENST00000588284 DEFB104AQ8WTQ1 72 aa7.36□□□□□ -1.23
CHMP1B-202ENST00000588284 VSIG2Q96IQ7 327 aa7.36□□□□□ -1.23
CHMP1B-202ENST00000588284 TMEM243Q9BU79 118 aa7.36□□□□□ -1.23
CHMP1B-202ENST00000588284 SPANXA1Q9NS26 97 aa7.36□□□□□ -1.23
CHMP1B-202ENST00000588284 A0A087WX48 190 aa7.35□□□□□ -1.23
CHMP1B-202ENST00000588284 RPL39P62891 51 aaKnown RBP7.35□□□□□ -1.23
CHMP1B-202ENST00000588284 PMVKQ15126 192 aa7.35□□□□□ -1.23
CHMP1B-202ENST00000588284 TEX43Q6ZNM6 134 aa7.35□□□□□ -1.23
CHMP1B-202ENST00000588284 VCX2Q9H322 139 aa7.35□□□□□ -1.23
CHMP1B-202ENST00000588284 ICOSQ9Y6W8 199 aa7.35□□□□□ -1.23
CHMP1B-202ENST00000588284 TRBV6-8A0A0A6YYG3 113 aa7.34□□□□□ -1.23
CHMP1B-202ENST00000588284 A0A0J9YY99 117 aa7.34□□□□□ -1.23
CHMP1B-202ENST00000588284 HSBP1L1C9JCN9 74 aa7.34□□□□□ -1.23
CHMP1B-202ENST00000588284 UBE2L6O14933 153 aa7.34□□□□□ -1.23
CHMP1B-202ENST00000588284 NTM-AS1Q6ZSK4 140 aa7.34□□□□□ -1.23
CHMP1B-202ENST00000588284 VAMP8Q9BV40 100 aa7.34□□□□□ -1.23
CHMP1B-202ENST00000588284 CSDC2Q9Y534 153 aaKnown RBP7.34□□□□□ -1.23
CHMP1B-202ENST00000588284 TRAV9-2A0A087WT02 112 aa7.33□□□□□ -1.24
CHMP1B-202ENST00000588284 DEFB131BA0A096LNP1 70 aa7.33□□□□□ -1.24
CHMP1B-202ENST00000588284 TRAV10A0A0B4J240 114 aa7.33□□□□□ -1.24
CHMP1B-202ENST00000588284 PRSS29PA6NIE9 313 aa7.33□□□□□ -1.24
CHMP1B-202ENST00000588284 DPM2O94777 84 aa7.33□□□□□ -1.24
CHMP1B-202ENST00000588284 MRPS36P82909 103 aaKnown RBP7.33□□□□□ -1.24
CHMP1B-202ENST00000588284 ODF1Q14990 250 aa7.33□□□□□ -1.24
CHMP1B-202ENST00000588284 AMMECR1LQ6DCA0 310 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms