RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 TMEM238LA0A1B0GVL6 79 aa10.7□□□□□ -0.7
CCDC43-203ENST00000588210 A6NJY4 79 aa10.7□□□□□ -0.7
CCDC43-203ENST00000588210 K7EQG2 157 aa10.7□□□□□ -0.7
CCDC43-203ENST00000588210 ZNF688P0C7X2 276 aa10.7□□□□□ -0.7
CCDC43-203ENST00000588210 SYT8Q8NBV8 401 aa10.7□□□□□ -0.7
CCDC43-203ENST00000588210 PLEKHB2Q96CS7 222 aa10.7□□□□□ -0.7
CCDC43-203ENST00000588210 DNAH3Q8TD57 4116 aa10.7□□□□□ -0.7
CCDC43-203ENST00000588210 F5H697 171 aa10.69□□□□□ -0.7
CCDC43-203ENST00000588210 SNRPD3P62318 126 aaKnown RBP10.69□□□□□ -0.7
CCDC43-203ENST00000588210 RPL24P83731 157 aaKnown RBP10.69□□□□□ -0.7
CCDC43-203ENST00000588210 MORN3Q6PF18 240 aaPredicted RBP10.69□□□□□ -0.7
CCDC43-203ENST00000588210 NOTCH1P46531 2555 aa10.69□□□□□ -0.7
CCDC43-203ENST00000588210 RPL39P62891 51 aaKnown RBP10.69□□□□□ -0.7
CCDC43-203ENST00000588210 CD300EQ496F6 205 aaPredicted RBP10.69□□□□□ -0.7
CCDC43-203ENST00000588210 SCGB1D4Q6XE38 83 aa10.69□□□□□ -0.7
CCDC43-203ENST00000588210 DYNLRB2Q8TF09 96 aa10.69□□□□□ -0.7
CCDC43-203ENST00000588210 SPANXB1Q9NS25 103 aaPredicted RBP10.69□□□□□ -0.7
CCDC43-203ENST00000588210 ZNF256Q9Y2P7 627 aaPredicted RBP10.69□□□□□ -0.7
CCDC43-203ENST00000588210 UBE2D1P51668 147 aa10.68□□□□□ -0.7
CCDC43-203ENST00000588210 ZNF876PQ49A33 203 aa10.68□□□□□ -0.7
CCDC43-203ENST00000588210 IGHV1OR15-1A0A075B7D0 117 aa10.67□□□□□ -0.7
CCDC43-203ENST00000588210 H3BMG7 143 aa10.67□□□□□ -0.7
CCDC43-203ENST00000588210 RHOHQ15669 191 aa10.67□□□□□ -0.7
CCDC43-203ENST00000588210 DEFB114Q30KQ6 69 aa10.67□□□□□ -0.7
CCDC43-203ENST00000588210 MDFICQ9P1T7 246 aa10.67□□□□□ -0.7
CCDC43-203ENST00000588210 M0QY20 66 aa10.67□□□□□ -0.7
CCDC43-203ENST00000588210 PRB2P02812 416 aaPredicted RBP10.67□□□□□ -0.7
CCDC43-203ENST00000588210 WFDC2Q14508 124 aa10.67□□□□□ -0.7
CCDC43-203ENST00000588210 Q8N1Y9 231 aa10.67□□□□□ -0.7
CCDC43-203ENST00000588210 PRO0461Q9UI25 63 aa10.67□□□□□ -0.7
CCDC43-203ENST00000588210 TRAV12-2A0A075B6T6 113 aa10.66□□□□□ -0.7
CCDC43-203ENST00000588210 A0A0J9YY99 117 aa10.66□□□□□ -0.7
CCDC43-203ENST00000588210 ZNF56Q15929 161 aa10.66□□□□□ -0.7
CCDC43-203ENST00000588210 FAM74A4Q5TZK3 123 aa10.66□□□□□ -0.7
CCDC43-203ENST00000588210 TRPT1Q86TN4 253 aaKnown RBP10.66□□□□□ -0.7
CCDC43-203ENST00000588210 EMP1P54849 157 aa10.65□□□□□ -0.7
CCDC43-203ENST00000588210 PGPEP1Q9NXJ5 209 aa10.65□□□□□ -0.7
CCDC43-203ENST00000588210 SRSF9Q13242 221 aaKnown RBP eCLIP10.65□□□□□ -0.7
CCDC43-203ENST00000588210 GAGE13Q4V321 117 aa10.65□□□□□ -0.7
CCDC43-203ENST00000588210 AMTNQ6UX39 209 aa10.65□□□□□ -0.7
CCDC43-203ENST00000588210 NFE4Q86UQ8 179 aa10.65□□□□□ -0.7
CCDC43-203ENST00000588210 ZNRF2Q8NHG8 242 aa10.65□□□□□ -0.7
CCDC43-203ENST00000588210 IGKV3-20P01619 116 aa10.64□□□□□ -0.71
CCDC43-203ENST00000588210 SPINK13Q1W4C9 94 aa10.64□□□□□ -0.71
CCDC43-203ENST00000588210 MRPL16Q9NX20 251 aaKnown RBP10.64□□□□□ -0.71
CCDC43-203ENST00000588210 SORL1Q92673 2214 aa10.64□□□□□ -0.71
CCDC43-203ENST00000588210 TSPEAR-AS2P59090 65 aa10.64□□□□□ -0.71
CCDC43-203ENST00000588210 DEFB104AQ8WTQ1 72 aa10.64□□□□□ -0.71
CCDC43-203ENST00000588210 TRGV11A0A075B6L2 103 aa10.63□□□□□ -0.71
CCDC43-203ENST00000588210 TRAV25A0A0B4J276 109 aa10.63□□□□□ -0.71
CCDC43-203ENST00000588210 J3QR89 54 aa10.63□□□□□ -0.71
CCDC43-203ENST00000588210 K7EIL1 84 aa10.62□□□□□ -0.71
CCDC43-203ENST00000588210 TSPAN13O95857 204 aa10.62□□□□□ -0.71
CCDC43-203ENST00000588210 TMEM170BQ5T4T1 132 aa10.62□□□□□ -0.71
CCDC43-203ENST00000588210 TMEM61Q8N0U2 210 aa10.62□□□□□ -0.71
CCDC43-203ENST00000588210 AMELXQ99217 191 aa10.62□□□□□ -0.71
CCDC43-203ENST00000588210 MEGF8Q7Z7M0 2845 aa10.62□□□□□ -0.71
CCDC43-203ENST00000588210 SLC25A29Q8N8R3 303 aa10.62□□□□□ -0.71
CCDC43-203ENST00000588210 MRAPQ8TCY5 172 aa10.62□□□□□ -0.71
CCDC43-203ENST00000588210 IGHV3-30P01768 117 aa10.61□□□□□ -0.71
CCDC43-203ENST00000588210 IGHV3-30-5P0DP03 117 aa10.61□□□□□ -0.71
CCDC43-203ENST00000588210 ETDBQ3ZM63 59 aa10.61□□□□□ -0.71
CCDC43-203ENST00000588210 C20orf203Q8NBC4 194 aa10.61□□□□□ -0.71
CCDC43-203ENST00000588210 EDA2RQ9HAV5 297 aa10.61□□□□□ -0.71
CCDC43-203ENST00000588210 I3L3M4 83 aa10.61□□□□□ -0.71
CCDC43-203ENST00000588210 J3QQQ9 107 aa10.61□□□□□ -0.71
CCDC43-203ENST00000588210 P0DMU3 169 aa10.61□□□□□ -0.71
CCDC43-203ENST00000588210 FAM231AP0DMU4 169 aa10.61□□□□□ -0.71
CCDC43-203ENST00000588210 FAM231CP0DMU5 169 aa10.61□□□□□ -0.71
CCDC43-203ENST00000588210 UBE2D3P61077 147 aa10.61□□□□□ -0.71
CCDC43-203ENST00000588210 UBE2D2P62837 147 aa10.61□□□□□ -0.71
CCDC43-203ENST00000588210 LYRM7Q5U5X0 104 aa10.6□□□□□ -0.71
CCDC43-203ENST00000588210 SH2D6Q7Z4S9 175 aa10.6□□□□□ -0.71
CCDC43-203ENST00000588210 SPAG8Q99932 426 aaPredicted RBP10.6□□□□□ -0.71
CCDC43-203ENST00000588210 TMEM223A0PJW6 202 aa10.59□□□□□ -0.71
CCDC43-203ENST00000588210 LGALS3P17931 250 aaKnown RBP10.59□□□□□ -0.71
CCDC43-203ENST00000588210 A8MTW9 85 aa10.59□□□□□ -0.71
CCDC43-203ENST00000588210 LEPROTO15243 131 aa10.59□□□□□ -0.71
CCDC43-203ENST00000588210 DEFB121Q5J5C9 76 aa10.59□□□□□ -0.71
CCDC43-203ENST00000588210 CFAP126Q5VTH2 177 aa10.59□□□□□ -0.71
CCDC43-203ENST00000588210 MTURNQ8N3F0 131 aa10.59□□□□□ -0.71
CCDC43-203ENST00000588210 TMEM238C9JI98 176 aa10.58□□□□□ -0.72
CCDC43-203ENST00000588210 APOMO95445 188 aa10.58□□□□□ -0.72
CCDC43-203ENST00000588210 ATP6V0E2Q8NHE4 81 aa10.58□□□□□ -0.72
CCDC43-203ENST00000588210 SPATA25Q9BR10 227 aa10.58□□□□□ -0.72
CCDC43-203ENST00000588210 NACAE9PAV3 2078 aa10.58□□□□□ -0.72
CCDC43-203ENST00000588210 RBMY1A1P0DJD3 496 aaKnown RBP10.57□□□□□ -0.72
CCDC43-203ENST00000588210 RBMY1CP0DJD4 496 aa10.57□□□□□ -0.72
CCDC43-203ENST00000588210 RBMY1FQ15415 496 aaKnown RBP10.57□□□□□ -0.72
CCDC43-203ENST00000588210 OPRPNQ99935 248 aaPredicted RBP10.57□□□□□ -0.72
CCDC43-203ENST00000588210 PRKDCP78527 4128 aaKnown RBP10.57□□□□□ -0.72
CCDC43-203ENST00000588210 IGLV4-3A0A075B6K6 122 aa10.57□□□□□ -0.72
CCDC43-203ENST00000588210 ZNF22P17026 224 aaPredicted RBP10.57□□□□□ -0.72
CCDC43-203ENST00000588210 GAGE12HA6NDE8 117 aa10.56□□□□□ -0.72
CCDC43-203ENST00000588210 RHODO00212 210 aa10.56□□□□□ -0.72
CCDC43-203ENST00000588210 CFC1BP0CG36 223 aa10.56□□□□□ -0.72
CCDC43-203ENST00000588210 CFC1P0CG37 223 aa10.56□□□□□ -0.72
CCDC43-203ENST00000588210 LOC107984156A0A0G2JMH3 177 aa10.56□□□□□ -0.72
CCDC43-203ENST00000588210 SCGB1A1P11684 91 aa10.56□□□□□ -0.72
CCDC43-203ENST00000588210 SMCPP49901 116 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 314.1 ms