RNA–Protein interactions for RNA: ENST00000587997.6

GFAP-210, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 609 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-210ENST00000587997 F2Z2F3 143 aa9.59□□□□□ -0.87
GFAP-210ENST00000587997 TEX46H3BTG2 121 aa9.59□□□□□ -0.87
GFAP-210ENST00000587997 IFNA1P01562 189 aa9.59□□□□□ -0.87
GFAP-210ENST00000587997 C11orf52Q96A22 123 aa9.59□□□□□ -0.87
GFAP-210ENST00000587997 PGLYRP4Q96LB8 373 aa9.59□□□□□ -0.87
GFAP-210ENST00000587997 GFRA4Q9GZZ7 299 aa9.59□□□□□ -0.87
GFAP-210ENST00000587997 HMSDA8MTL9 139 aa9.58□□□□□ -0.88
GFAP-210ENST00000587997 CFAP161Q6P656 301 aa9.58□□□□□ -0.88
GFAP-210ENST00000587997 LYZL1Q6UWQ5 148 aa9.58□□□□□ -0.88
GFAP-210ENST00000587997 RAB19A4D1S5 217 aa9.57□□□□□ -0.88
GFAP-210ENST00000587997 GAGE12HA6NDE8 117 aa9.57□□□□□ -0.88
GFAP-210ENST00000587997 MT1HL1P0DM35 61 aa9.57□□□□□ -0.88
GFAP-210ENST00000587997 AMMECR1LQ6DCA0 310 aa9.57□□□□□ -0.88
GFAP-210ENST00000587997 SPACA4Q8TDM5 124 aa9.57□□□□□ -0.88
GFAP-210ENST00000587997 BIN3Q9NQY0 253 aa9.57□□□□□ -0.88
GFAP-210ENST00000587997 C19orf71A6NCJ1 209 aa9.56□□□□□ -0.88
GFAP-210ENST00000587997 PHOX2AO14813 284 aa9.56□□□□□ -0.88
GFAP-210ENST00000587997 SLPIP03973 132 aa9.56□□□□□ -0.88
GFAP-210ENST00000587997 NTF3P20783 257 aa9.56□□□□□ -0.88
GFAP-210ENST00000587997 CCL20P78556 96 aa9.56□□□□□ -0.88
GFAP-210ENST00000587997 SMIM12Q96EX1 92 aa9.56□□□□□ -0.88
GFAP-210ENST00000587997 COX6A2Q02221 97 aa9.55□□□□□ -0.88
GFAP-210ENST00000587997 TWIST1Q15672 202 aa9.55□□□□□ -0.88
GFAP-210ENST00000587997 HIGD2BQ4VC39 106 aa9.55□□□□□ -0.88
GFAP-210ENST00000587997 GTSF1Q8WW33 167 aa9.55□□□□□ -0.88
GFAP-210ENST00000587997 MED9Q9NWA0 146 aa9.55□□□□□ -0.88
GFAP-210ENST00000587997 IGKV2-24A0A0C4DH68 120 aa9.54□□□□□ -0.88
GFAP-210ENST00000587997 PDE6DO43924 150 aa9.54□□□□□ -0.88
GFAP-210ENST00000587997 RPS10P46783 165 aaKnown RBP9.54□□□□□ -0.88
GFAP-210ENST00000587997 MAJINQ3KP22 176 aa9.54□□□□□ -0.88
GFAP-210ENST00000587997 RNASEKQ6P5S7 137 aaKnown RBP9.54□□□□□ -0.88
GFAP-210ENST00000587997 C15orf56Q8N910 161 aa9.54□□□□□ -0.88
GFAP-210ENST00000587997 PLAC8Q9NZF1 115 aa9.54□□□□□ -0.88
GFAP-210ENST00000587997 NDUFS6O75380 124 aaKnown RBP9.53□□□□□ -0.88
GFAP-210ENST00000587997 MEF2BQ02080 365 aaPredicted RBP9.53□□□□□ -0.88
GFAP-210ENST00000587997 SMIM15Q7Z3B0 74 aa9.53□□□□□ -0.88
GFAP-210ENST00000587997 TRAV1-1A0A0B4J248 108 aa9.52□□□□□ -0.89
GFAP-210ENST00000587997 EIF5AL1Q6IS14 154 aaKnown RBP9.52□□□□□ -0.89
GFAP-210ENST00000587997 CHCHD10Q8WYQ3 142 aaPredicted RBP9.52□□□□□ -0.89
GFAP-210ENST00000587997 TRAV26-2A0A0B4J265 109 aa9.51□□□□□ -0.89
GFAP-210ENST00000587997 APCSP02743 223 aa9.51□□□□□ -0.89
GFAP-210ENST00000587997 CTRLP40313 264 aa9.51□□□□□ -0.89
GFAP-210ENST00000587997 C9orf62Q8N4C0 152 aa9.51□□□□□ -0.89
GFAP-210ENST00000587997 STPG4Q8N801 248 aa9.51□□□□□ -0.89
GFAP-210ENST00000587997 NUDT10Q8NFP7 164 aa9.51□□□□□ -0.89
GFAP-210ENST00000587997 PRSS3P2Q8NHM4 247 aa9.51□□□□□ -0.89
GFAP-210ENST00000587997 LYPD6BQ8NI32 183 aa9.51□□□□□ -0.89
GFAP-210ENST00000587997 NUDT11Q96G61 164 aa9.51□□□□□ -0.89
GFAP-210ENST00000587997 GATD1Q8NB37 220 aa9.5□□□□□ -0.89
GFAP-210ENST00000587997 RPP21Q9H633 154 aaKnown RBP9.5□□□□□ -0.89
GFAP-210ENST00000587997 TRBV20OR9-2A0A075B6H5 130 aa9.49□□□□□ -0.89
GFAP-210ENST00000587997 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.49□□□□□ -0.89
GFAP-210ENST00000587997 IGKV2-29A2NJV5 120 aaPredicted RBP9.49□□□□□ -0.89
GFAP-210ENST00000587997 NCR2O95944 276 aa9.49□□□□□ -0.89
GFAP-210ENST00000587997 PKIGQ9Y2B9 76 aa9.49□□□□□ -0.89
GFAP-210ENST00000587997 BCL2P10415 239 aa9.48□□□□□ -0.89
GFAP-210ENST00000587997 FGF6P10767 208 aa9.48□□□□□ -0.89
GFAP-210ENST00000587997 PRR3P79522 188 aaKnown RBP9.48□□□□□ -0.89
GFAP-210ENST00000587997 Q6ZNX1 250 aa9.48□□□□□ -0.89
GFAP-210ENST00000587997 RPL39LQ96EH5 51 aaKnown RBP9.48□□□□□ -0.89
GFAP-210ENST00000587997 TMEM101Q96IK0 257 aa9.48□□□□□ -0.89
GFAP-210ENST00000587997 BTF3L4Q96K17 158 aa9.48□□□□□ -0.89
GFAP-210ENST00000587997 GVQW2A0A096LPI5 108 aaPredicted RBP9.47□□□□□ -0.89
GFAP-210ENST00000587997 H7C423 109 aa9.47□□□□□ -0.89
GFAP-210ENST00000587997 TEX261Q6UWH6 196 aa9.47□□□□□ -0.89
GFAP-210ENST00000587997 RNASE7Q9H1E1 156 aaKnown RBP9.47□□□□□ -0.89
GFAP-210ENST00000587997 A0A096LNI7 61 aa9.46□□□□□ -0.9
GFAP-210ENST00000587997 SDHAF1A6NFY7 115 aa9.46□□□□□ -0.9
GFAP-210ENST00000587997 PMCHP20382 165 aa9.46□□□□□ -0.9
GFAP-210ENST00000587997 XCL1P47992 114 aa9.46□□□□□ -0.9
GFAP-210ENST00000587997 CNFNQ9BYD5 112 aa9.46□□□□□ -0.9
GFAP-210ENST00000587997 LINC00474Q9P2X8 69 aa9.46□□□□□ -0.9
GFAP-210ENST00000587997 ZNF25P17030 456 aaPredicted RBP9.45□□□□□ -0.9
GFAP-210ENST00000587997 TAGLN2P37802 199 aaKnown RBP9.45□□□□□ -0.9
GFAP-210ENST00000587997 OR5A1Q8NGJ0 315 aa9.45□□□□□ -0.9
GFAP-210ENST00000587997 LINC01600Q96MT4 127 aa9.45□□□□□ -0.9
GFAP-210ENST00000587997 I3L3M4 83 aa9.44□□□□□ -0.9
GFAP-210ENST00000587997 CCL25O15444 150 aa9.44□□□□□ -0.9
GFAP-210ENST00000587997 FOXI1Q12951 378 aa9.44□□□□□ -0.9
GFAP-210ENST00000587997 REG3GQ6UW15 175 aa9.44□□□□□ -0.9
GFAP-210ENST00000587997 OCC1Q8TAD7 63 aa9.44□□□□□ -0.9
GFAP-210ENST00000587997 CARD19Q96LW7 228 aa9.44□□□□□ -0.9
GFAP-210ENST00000587997 IGHV1-58A0A0C4DH39 117 aa9.43□□□□□ -0.9
GFAP-210ENST00000587997 ZNF561-AS1K7EIQ3 104 aa9.43□□□□□ -0.9
GFAP-210ENST00000587997 K7EN84 100 aa9.43□□□□□ -0.9
GFAP-210ENST00000587997 GATCO43716 136 aaKnown RBP9.43□□□□□ -0.9
GFAP-210ENST00000587997 FOXA3P55318 350 aaPredicted RBP9.43□□□□□ -0.9
GFAP-210ENST00000587997 SS18Q15532 418 aa9.43□□□□□ -0.9
GFAP-210ENST00000587997 BORCS7Q96B45 105 aa9.43□□□□□ -0.9
GFAP-210ENST00000587997 LINC00526Q96FQ7 95 aa9.43□□□□□ -0.9
GFAP-210ENST00000587997 LINC00959A0A1B0GUT2 108 aa9.42□□□□□ -0.9
GFAP-210ENST00000587997 MRAP2Q96G30 205 aa9.42□□□□□ -0.9
GFAP-210ENST00000587997 A8MWL6 223 aa9.41□□□□□ -0.9
GFAP-210ENST00000587997 SPINK6Q6UWN8 80 aa9.41□□□□□ -0.9
GFAP-210ENST00000587997 ST20Q9HBF5 79 aa9.41□□□□□ -0.9
GFAP-210ENST00000587997 A0A0J9YXV3 536 aa9.4□□□□□ -0.9
GFAP-210ENST00000587997 SYCNQ0VAF6 134 aa9.4□□□□□ -0.9
GFAP-210ENST00000587997 Q6ZRP5 223 aa9.4□□□□□ -0.9
GFAP-210ENST00000587997 TMEM242Q9NWH2 141 aa9.4□□□□□ -0.9
GFAP-210ENST00000587997 FAM231BA6NCW3 169 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms