RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 SH2D1AO60880 128 aa7.23□□□□□ -1.25
LINC01539-201ENST00000587904 CKS2P33552 79 aa7.23□□□□□ -1.25
LINC01539-201ENST00000587904 CXCL5P42830 114 aa7.23□□□□□ -1.25
LINC01539-201ENST00000587904 CRIP1P50238 77 aa7.23□□□□□ -1.25
LINC01539-201ENST00000587904 IGFL4Q6B9Z1 124 aa7.23□□□□□ -1.25
LINC01539-201ENST00000587904 C9orf47Q6ZRZ4 202 aa7.23□□□□□ -1.25
LINC01539-201ENST00000587904 WFDC3Q8IUB2 231 aa7.23□□□□□ -1.25
LINC01539-201ENST00000587904 RNF182Q8N6D2 247 aa7.23□□□□□ -1.25
LINC01539-201ENST00000587904 PRO1854Q9UHT4 67 aa7.23□□□□□ -1.25
LINC01539-201ENST00000587904 SOCS3O14543 225 aa7.23□□□□□ -1.25
LINC01539-201ENST00000587904 SRSF9Q13242 221 aaKnown RBP eCLIP7.23□□□□□ -1.25
LINC01539-201ENST00000587904 LINC01620Q4KN68 170 aa7.23□□□□□ -1.25
LINC01539-201ENST00000587904 Q8TAT8 98 aa7.23□□□□□ -1.25
LINC01539-201ENST00000587904 RHPN1-AS1Q9BWJ2 59 aa7.23□□□□□ -1.25
LINC01539-201ENST00000587904 V9GYY9 64 aa7.23□□□□□ -1.25
LINC01539-201ENST00000587904 PDZD2O15018 2839 aa7.22□□□□□ -1.25
LINC01539-201ENST00000587904 PRAC2D3DTV9 90 aa7.22□□□□□ -1.25
LINC01539-201ENST00000587904 SFTA2Q6UW10 78 aa7.22□□□□□ -1.25
LINC01539-201ENST00000587904 C2orf48Q96LS8 159 aa7.22□□□□□ -1.25
LINC01539-201ENST00000587904 LINC00477Q96M19 166 aa7.22□□□□□ -1.25
LINC01539-201ENST00000587904 ZNF256Q9Y2P7 627 aaPredicted RBP7.22□□□□□ -1.25
LINC01539-201ENST00000587904 FLNAP21333 2647 aaKnown RBP7.22□□□□□ -1.25
LINC01539-201ENST00000587904 ZFHX3Q15911 3703 aa7.21□□□□□ -1.25
LINC01539-201ENST00000587904 H3BT86 120 aa7.21□□□□□ -1.25
LINC01539-201ENST00000587904 IL17RELQ6ZVW7 336 aa7.21□□□□□ -1.25
LINC01539-201ENST00000587904 Q8N8P6 123 aa7.21□□□□□ -1.25
LINC01539-201ENST00000587904 TEX49A0A1B0GTD5 131 aa7.21□□□□□ -1.26
LINC01539-201ENST00000587904 H7C1H1 209 aa7.21□□□□□ -1.26
LINC01539-201ENST00000587904 KRTAP1-1Q07627 177 aa7.21□□□□□ -1.26
LINC01539-201ENST00000587904 ZNF415Q09FC8 603 aa7.21□□□□□ -1.26
LINC01539-201ENST00000587904 C10orf99Q6UWK7 81 aa7.21□□□□□ -1.26
LINC01539-201ENST00000587904 AGPAT4-IT1Q9H0P7 198 aa7.21□□□□□ -1.26
LINC01539-201ENST00000587904 F8VRH5 84 aa7.2□□□□□ -1.26
LINC01539-201ENST00000587904 ATOX1O00244 68 aa7.2□□□□□ -1.26
LINC01539-201ENST00000587904 CFC1BP0CG36 223 aa7.2□□□□□ -1.26
LINC01539-201ENST00000587904 CFC1P0CG37 223 aa7.2□□□□□ -1.26
LINC01539-201ENST00000587904 ERCC8Q13216 396 aa7.2□□□□□ -1.26
LINC01539-201ENST00000587904 LINC00643Q86TS7 51 aa7.2□□□□□ -1.26
LINC01539-201ENST00000587904 C1orf43Q9BWL3 253 aa7.2□□□□□ -1.26
LINC01539-201ENST00000587904 PYGO1Q9Y3Y4 419 aa7.2□□□□□ -1.26
LINC01539-201ENST00000587904 DNAJC9-AS1A6NH13 148 aa7.2□□□□□ -1.26
LINC01539-201ENST00000587904 CCDC168Q8NDH2 2452 aa7.19□□□□□ -1.26
LINC01539-201ENST00000587904 ZNF80P51504 273 aaPredicted RBP7.19□□□□□ -1.26
LINC01539-201ENST00000587904 RPL11P62913 178 aaKnown RBP7.19□□□□□ -1.26
LINC01539-201ENST00000587904 CEMP1Q6PRD7 247 aaPredicted RBP7.19□□□□□ -1.26
LINC01539-201ENST00000587904 SCGB1D4Q6XE38 83 aa7.19□□□□□ -1.26
LINC01539-201ENST00000587904 C20orf173Q96LM9 149 aa7.19□□□□□ -1.26
LINC01539-201ENST00000587904 IGHV4OR15-8A0A075B7B6 117 aa7.18□□□□□ -1.26
LINC01539-201ENST00000587904 A0A087WW49 117 aa7.18□□□□□ -1.26
LINC01539-201ENST00000587904 ZNF815PA8K554 130 aa7.18□□□□□ -1.26
LINC01539-201ENST00000587904 OXTP01178 125 aa7.18□□□□□ -1.26
LINC01539-201ENST00000587904 C5orf38Q86SI9 138 aa7.18□□□□□ -1.26
LINC01539-201ENST00000587904 C4orf3Q8WVX3 66 aa7.18□□□□□ -1.26
LINC01539-201ENST00000587904 TRAV13-1A0A0B4J241 112 aa7.18□□□□□ -1.26
LINC01539-201ENST00000587904 PRB4P10163 310 aaPredicted RBP7.18□□□□□ -1.26
LINC01539-201ENST00000587904 HOXD3P31249 432 aaPredicted RBP7.18□□□□□ -1.26
LINC01539-201ENST00000587904 HIST1H4AP62805 103 aaKnown RBP7.18□□□□□ -1.26
LINC01539-201ENST00000587904 LYZL1Q6UWQ5 148 aa7.18□□□□□ -1.26
LINC01539-201ENST00000587904 CNFNQ9BYD5 112 aa7.18□□□□□ -1.26
LINC01539-201ENST00000587904 A0A0B4J2C4 111 aa7.17□□□□□ -1.26
LINC01539-201ENST00000587904 IGHV3-33P01772 117 aa7.17□□□□□ -1.26
LINC01539-201ENST00000587904 C2orf82Q6UX34 121 aa7.17□□□□□ -1.26
LINC01539-201ENST00000587904 Q6ZSV7 163 aa7.17□□□□□ -1.26
LINC01539-201ENST00000587904 DCANP1Q8TF63 244 aa7.17□□□□□ -1.26
LINC01539-201ENST00000587904 hADV29S1A0JD25 119 aa7.16□□□□□ -1.26
LINC01539-201ENST00000587904 IGHV3-30P01768 117 aa7.16□□□□□ -1.26
LINC01539-201ENST00000587904 IGHV3-30-5P0DP03 117 aa7.16□□□□□ -1.26
LINC01539-201ENST00000587904 RPL35AP18077 110 aaKnown RBP7.16□□□□□ -1.26
LINC01539-201ENST00000587904 SYNJ2BPP57105 145 aa7.16□□□□□ -1.26
LINC01539-201ENST00000587904 FAM19A4Q96LR4 140 aa7.16□□□□□ -1.26
LINC01539-201ENST00000587904 TLN2Q9Y4G6 2542 aa7.16□□□□□ -1.26
LINC01539-201ENST00000587904 A0A0J9YY99 117 aa7.16□□□□□ -1.26
LINC01539-201ENST00000587904 NDUFC2-KCTD14E9PQ53 114 aa7.16□□□□□ -1.26
LINC01539-201ENST00000587904 RNASE1P07998 156 aaKnown RBP7.16□□□□□ -1.26
LINC01539-201ENST00000587904 EDN2P20800 178 aa7.16□□□□□ -1.26
LINC01539-201ENST00000587904 SNRPD3P62318 126 aaKnown RBP7.16□□□□□ -1.26
LINC01539-201ENST00000587904 APRG1Q8IVJ8 170 aa7.16□□□□□ -1.26
LINC01539-201ENST00000587904 PLEKHB2Q96CS7 222 aa7.16□□□□□ -1.26
LINC01539-201ENST00000587904 C9orf85Q96MD7 179 aa7.16□□□□□ -1.26
LINC01539-201ENST00000587904 PEMTQ9UBM1 199 aa7.16□□□□□ -1.26
LINC01539-201ENST00000587904 OTOGQ6ZRI0 2925 aa7.16□□□□□ -1.26
LINC01539-201ENST00000587904 IGLV2-18A0A075B6J9 118 aa7.15□□□□□ -1.26
LINC01539-201ENST00000587904 TRAV21A0A0B4J279 112 aa7.15□□□□□ -1.26
LINC01539-201ENST00000587904 TRBV30A0A0K0K1B3 111 aa7.15□□□□□ -1.26
LINC01539-201ENST00000587904 SMKR1H3BMG3 65 aa7.15□□□□□ -1.26
LINC01539-201ENST00000587904 PFN2P35080 140 aa7.15□□□□□ -1.26
LINC01539-201ENST00000587904 HERVK_113P61574 105 aa7.15□□□□□ -1.26
LINC01539-201ENST00000587904 SDIM1Q6ZPB5 146 aa7.15□□□□□ -1.26
LINC01539-201ENST00000587904 J3QQQ9 107 aa7.15□□□□□ -1.27
LINC01539-201ENST00000587904 LAGE3Q14657 143 aa7.15□□□□□ -1.27
LINC01539-201ENST00000587904 ZFAND2AQ8N6M9 145 aa7.15□□□□□ -1.27
LINC01539-201ENST00000587904 TMEM263Q8WUH6 116 aaKnown RBP7.15□□□□□ -1.27
LINC01539-201ENST00000587904 RNF185Q96GF1 192 aa7.15□□□□□ -1.27
LINC01539-201ENST00000587904 C16orf95Q9H693 158 aa7.15□□□□□ -1.27
LINC01539-201ENST00000587904 IGKV3D-20A0A0C4DH25 116 aa7.14□□□□□ -1.27
LINC01539-201ENST00000587904 K7EQG2 157 aa7.14□□□□□ -1.27
LINC01539-201ENST00000587904 SLC25A29Q8N8R3 303 aa7.14□□□□□ -1.27
LINC01539-201ENST00000587904 ESM1Q9NQ30 184 aa7.14□□□□□ -1.27
LINC01539-201ENST00000587904 ZNF469Q96JG9 3925 aaPredicted RBP7.14□□□□□ -1.27
LINC01539-201ENST00000587904 IGKV3-7A0A075B6H7 116 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms