RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 TENM3Q9P273 2699 aa18.43■□□□□ 0.54
CAPNS1-204ENST00000587718 E9PLD3 99 aa18.42■□□□□ 0.54
CAPNS1-204ENST00000587718 ODF3L2Q3SX64 289 aa18.42■□□□□ 0.54
CAPNS1-204ENST00000587718 TRBV25-1A0A075B6N4 114 aa18.41■□□□□ 0.54
CAPNS1-204ENST00000587718 OR11H12B2RN74 326 aa18.41■□□□□ 0.54
CAPNS1-204ENST00000587718 OR11H2Q8NH07 326 aa18.41■□□□□ 0.54
CAPNS1-204ENST00000587718 C11orf72Q8NBR9 251 aa18.4■□□□□ 0.54
CAPNS1-204ENST00000587718 DNAJC30Q96LL9 226 aa18.4■□□□□ 0.54
CAPNS1-204ENST00000587718 CHAC1Q9BUX1 264 aa18.4■□□□□ 0.54
CAPNS1-204ENST00000587718 TSHBP01222 138 aa18.39■□□□□ 0.53
CAPNS1-204ENST00000587718 CRYBA4P53673 196 aa18.39■□□□□ 0.53
CAPNS1-204ENST00000587718 NEGR1Q7Z3B1 354 aa18.39■□□□□ 0.53
CAPNS1-204ENST00000587718 STHQ8IWL8 128 aa18.39■□□□□ 0.53
CAPNS1-204ENST00000587718 LINC01587Q99440 93 aa18.39■□□□□ 0.53
CAPNS1-204ENST00000587718 SAP30O75446 220 aa18.38■□□□□ 0.53
CAPNS1-204ENST00000587718 PTTG1IPP53801 180 aa18.38■□□□□ 0.53
CAPNS1-204ENST00000587718 TM2D2Q9BX73 214 aa18.38■□□□□ 0.53
CAPNS1-204ENST00000587718 CST9LQ9H4G1 147 aa18.38■□□□□ 0.53
CAPNS1-204ENST00000587718 NBEAL2Q6ZNJ1 2754 aa18.38■□□□□ 0.53
CAPNS1-204ENST00000587718 AGRNO00468 2067 aa18.38■□□□□ 0.53
CAPNS1-204ENST00000587718 HERVK_113P61574 105 aa18.38■□□□□ 0.53
CAPNS1-204ENST00000587718 C20orf203Q8NBC4 194 aa18.38■□□□□ 0.53
CAPNS1-204ENST00000587718 PYGO1Q9Y3Y4 419 aa18.37■□□□□ 0.53
CAPNS1-204ENST00000587718 ZNF124Q15973 351 aa18.36■□□□□ 0.53
CAPNS1-204ENST00000587718 RS1O15537 224 aa18.35■□□□□ 0.53
CAPNS1-204ENST00000587718 VAMP3Q15836 100 aa18.35■□□□□ 0.53
CAPNS1-204ENST00000587718 MYMXA0A1B0GTQ4 84 aa18.34■□□□□ 0.53
CAPNS1-204ENST00000587718 C9orf118A6NHY6 69 aa18.34■□□□□ 0.53
CAPNS1-204ENST00000587718 C11orf86A6NJI1 115 aa18.34■□□□□ 0.53
CAPNS1-204ENST00000587718 SORL1Q92673 2214 aa18.34■□□□□ 0.53
CAPNS1-204ENST00000587718 IGLV4-69A0A075B6H9 119 aa18.34■□□□□ 0.53
CAPNS1-204ENST00000587718 TCTAP57738 103 aa18.34■□□□□ 0.53
CAPNS1-204ENST00000587718 NFE4Q86UQ8 179 aa18.34■□□□□ 0.53
CAPNS1-204ENST00000587718 IL17DQ8TAD2 202 aa18.34■□□□□ 0.53
CAPNS1-204ENST00000587718 IGHV3-53P01767 116 aa18.33■□□□□ 0.52
CAPNS1-204ENST00000587718 CFAP126Q5VTH2 177 aa18.33■□□□□ 0.52
CAPNS1-204ENST00000587718 TRAV8-6A0A0B4J262 113 aa18.32■□□□□ 0.52
CAPNS1-204ENST00000587718 CCL25O15444 150 aa18.32■□□□□ 0.52
CAPNS1-204ENST00000587718 P0DMU3 169 aa18.32■□□□□ 0.52
CAPNS1-204ENST00000587718 FAM231AP0DMU4 169 aa18.32■□□□□ 0.52
CAPNS1-204ENST00000587718 FAM231CP0DMU5 169 aa18.32■□□□□ 0.52
CAPNS1-204ENST00000587718 TNFRSF18Q9Y5U5 241 aa18.32■□□□□ 0.52
CAPNS1-204ENST00000587718 IGLV1-51P01701 117 aa18.31■□□□□ 0.52
CAPNS1-204ENST00000587718 RPL39P62891 51 aaKnown RBP18.31■□□□□ 0.52
CAPNS1-204ENST00000587718 Q6ZVH6 145 aa18.31■□□□□ 0.52
CAPNS1-204ENST00000587718 SBSPONQ8IVN8 264 aa18.31■□□□□ 0.52
CAPNS1-204ENST00000587718 CEND1Q8N111 149 aa18.31■□□□□ 0.52
CAPNS1-204ENST00000587718 MAPKAPK5-AS1Q8N8E1 139 aa18.31■□□□□ 0.52
CAPNS1-204ENST00000587718 PRADC1Q9BSG0 188 aa18.3■□□□□ 0.52
CAPNS1-204ENST00000587718 SMIM13P0DJ93 91 aa18.3■□□□□ 0.52
CAPNS1-204ENST00000587718 HTN1P15515 57 aa18.3■□□□□ 0.52
CAPNS1-204ENST00000587718 HUWE1Q7Z6Z7 4374 aaKnown RBP18.29■□□□□ 0.52
CAPNS1-204ENST00000587718 TTTY13Q9BZ97 58 aa18.29■□□□□ 0.52
CAPNS1-204ENST00000587718 STAB2Q8WWQ8 2551 aa18.28■□□□□ 0.52
CAPNS1-204ENST00000587718 C1orf158Q8N1D5 194 aa18.28■□□□□ 0.52
CAPNS1-204ENST00000587718 GCSHP23434 173 aa18.27■□□□□ 0.52
CAPNS1-204ENST00000587718 RYR3Q15413 4870 aa18.26■□□□□ 0.51
CAPNS1-204ENST00000587718 CIDEAO60543 219 aa18.25■□□□□ 0.51
CAPNS1-204ENST00000587718 TMEM263Q8WUH6 116 aaKnown RBP18.25■□□□□ 0.51
CAPNS1-204ENST00000587718 C1QTNF4Q9BXJ3 329 aa18.25■□□□□ 0.51
CAPNS1-204ENST00000587718 XCL2Q9UBD3 114 aa18.25■□□□□ 0.51
CAPNS1-204ENST00000587718 TRBV7-3A0A075B6L6 115 aa18.25■□□□□ 0.51
CAPNS1-204ENST00000587718 GTF2H5Q6ZYL4 71 aa18.25■□□□□ 0.51
CAPNS1-204ENST00000587718 OR4C5Q8NGB2 326 aa18.25■□□□□ 0.51
CAPNS1-204ENST00000587718 SPANXA1Q9NS26 97 aa18.25■□□□□ 0.51
CAPNS1-204ENST00000587718 AMMECR1LQ6DCA0 310 aa18.24■□□□□ 0.51
CAPNS1-204ENST00000587718 RNASE8Q8TDE3 154 aaKnown RBP18.24■□□□□ 0.51
CAPNS1-204ENST00000587718 IGLV4-3A0A075B6K6 122 aa18.23■□□□□ 0.51
CAPNS1-204ENST00000587718 FXYD2P54710 66 aa18.23■□□□□ 0.51
CAPNS1-204ENST00000587718 VCX2Q9H322 139 aa18.23■□□□□ 0.51
CAPNS1-204ENST00000587718 TRBV10-1A0A0K0K1A3 114 aa18.22■□□□□ 0.51
CAPNS1-204ENST00000587718 AMELXQ99217 191 aa18.22■□□□□ 0.51
CAPNS1-204ENST00000587718 K7EP13 123 aa18.21■□□□□ 0.51
CAPNS1-204ENST00000587718 HIST1H4GQ99525 98 aa18.21■□□□□ 0.51
CAPNS1-204ENST00000587718 A0A1B0GWB2 263 aa18.21■□□□□ 0.51
CAPNS1-204ENST00000587718 ZNF815PA8K554 130 aa18.21■□□□□ 0.51
CAPNS1-204ENST00000587718 A8MZ25 164 aa18.21■□□□□ 0.51
CAPNS1-204ENST00000587718 DAZ2Q13117 558 aaKnown RBP18.21■□□□□ 0.51
CAPNS1-204ENST00000587718 C19orf73Q9NVV2 129 aa18.21■□□□□ 0.51
CAPNS1-204ENST00000587718 MRPL16Q9NX20 251 aaKnown RBP18.21■□□□□ 0.51
CAPNS1-204ENST00000587718 ZNRF2Q8NHG8 242 aa18.2■□□□□ 0.5
CAPNS1-204ENST00000587718 TIMM21Q9BVV7 248 aa18.2■□□□□ 0.5
CAPNS1-204ENST00000587718 C3orf84H3BNL1 204 aa18.19■□□□□ 0.5
CAPNS1-204ENST00000587718 IGHV4-30-4P0DP06 118 aa18.19■□□□□ 0.5
CAPNS1-204ENST00000587718 PHLDA1Q8WV24 401 aaPredicted RBP18.19■□□□□ 0.5
CAPNS1-204ENST00000587718 IGHV3-73A0A0B4J1V6 119 aa18.18■□□□□ 0.5
CAPNS1-204ENST00000587718 TRAV4A0A0B4J268 109 aa18.18■□□□□ 0.5
CAPNS1-204ENST00000587718 SPANXB1Q9NS25 103 aaPredicted RBP18.18■□□□□ 0.5
CAPNS1-204ENST00000587718 GAGE10A6NGK3 116 aa18.17■□□□□ 0.5
CAPNS1-204ENST00000587718 LEPROTO15243 131 aa18.17■□□□□ 0.5
CAPNS1-204ENST00000587718 AZU1P20160 251 aa18.17■□□□□ 0.5
CAPNS1-204ENST00000587718 COTL1Q14019 142 aa18.17■□□□□ 0.5
CAPNS1-204ENST00000587718 TMEM170BQ5T4T1 132 aa18.17■□□□□ 0.5
CAPNS1-204ENST00000587718 Q6ZSN1 163 aa18.17■□□□□ 0.5
CAPNS1-204ENST00000587718 OR5A1Q8NGJ0 315 aa18.17■□□□□ 0.5
CAPNS1-204ENST00000587718 C16orf74Q96GX8 76 aa18.17■□□□□ 0.5
CAPNS1-204ENST00000587718 TM2D3Q9BRN9 247 aa18.17■□□□□ 0.5
CAPNS1-204ENST00000587718 CHCHD7Q9BUK0 85 aa18.17■□□□□ 0.5
CAPNS1-204ENST00000587718 TMEM238LA0A1B0GVL6 79 aa18.17■□□□□ 0.5
CAPNS1-204ENST00000587718 A0A1W2PPM0 123 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms