RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 A0A087WYN8 130 aa9.65□□□□□ -0.86
PRKCSH-204ENST00000587290 TRAV8-4A0A0B4J246 113 aa9.65□□□□□ -0.86
PRKCSH-204ENST00000587290 A0A1B0GUV1 79 aa9.65□□□□□ -0.86
PRKCSH-204ENST00000587290 UBE2L6O14933 153 aa9.65□□□□□ -0.86
PRKCSH-204ENST00000587290 TRGC1P0CF51 173 aa9.65□□□□□ -0.86
PRKCSH-204ENST00000587290 SULT1A2P50226 295 aa9.65□□□□□ -0.86
PRKCSH-204ENST00000587290 C15orf56Q8N910 161 aa9.65□□□□□ -0.86
PRKCSH-204ENST00000587290 PGLYRP4Q96LB8 373 aa9.65□□□□□ -0.86
PRKCSH-204ENST00000587290 IGHV3-64A0A075B6Q5 118 aa9.64□□□□□ -0.87
PRKCSH-204ENST00000587290 GAGE12HA6NDE8 117 aa9.64□□□□□ -0.87
PRKCSH-204ENST00000587290 F2Z2F3 143 aa9.64□□□□□ -0.87
PRKCSH-204ENST00000587290 CTRLP40313 264 aa9.64□□□□□ -0.87
PRKCSH-204ENST00000587290 COTL1Q14019 142 aa9.64□□□□□ -0.87
PRKCSH-204ENST00000587290 HIGD2BQ4VC39 106 aa9.64□□□□□ -0.87
PRKCSH-204ENST00000587290 GATD1Q8NB37 220 aa9.64□□□□□ -0.87
PRKCSH-204ENST00000587290 NUDT10Q8NFP7 164 aa9.64□□□□□ -0.87
PRKCSH-204ENST00000587290 SPACA4Q8TDM5 124 aa9.64□□□□□ -0.87
PRKCSH-204ENST00000587290 RPL39LQ96EH5 51 aaKnown RBP9.64□□□□□ -0.87
PRKCSH-204ENST00000587290 DPH3Q96FX2 82 aa9.64□□□□□ -0.87
PRKCSH-204ENST00000587290 NUDT11Q96G61 164 aa9.64□□□□□ -0.87
PRKCSH-204ENST00000587290 RNASE7Q9H1E1 156 aaKnown RBP9.64□□□□□ -0.87
PRKCSH-204ENST00000587290 AP5S1Q9NUS5 200 aa9.64□□□□□ -0.87
PRKCSH-204ENST00000587290 XKRY2A2RUG3 117 aa9.63□□□□□ -0.87
PRKCSH-204ENST00000587290 BCL2P10415 239 aa9.63□□□□□ -0.87
PRKCSH-204ENST00000587290 FOXA3P55318 350 aaPredicted RBP9.63□□□□□ -0.87
PRKCSH-204ENST00000587290 TWIST1Q15672 202 aa9.63□□□□□ -0.87
PRKCSH-204ENST00000587290 Q6ZNX1 250 aa9.63□□□□□ -0.87
PRKCSH-204ENST00000587290 TNXBP22105 4242 aa9.62□□□□□ -0.87
PRKCSH-204ENST00000587290 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.62□□□□□ -0.87
PRKCSH-204ENST00000587290 IGKV2-29A2NJV5 120 aaPredicted RBP9.62□□□□□ -0.87
PRKCSH-204ENST00000587290 K7EN84 100 aa9.62□□□□□ -0.87
PRKCSH-204ENST00000587290 PDE6DO43924 150 aa9.62□□□□□ -0.87
PRKCSH-204ENST00000587290 WDR73Q6P4I2 378 aa9.62□□□□□ -0.87
PRKCSH-204ENST00000587290 C9orf62Q8N4C0 152 aa9.62□□□□□ -0.87
PRKCSH-204ENST00000587290 SMIM12Q96EX1 92 aa9.62□□□□□ -0.87
PRKCSH-204ENST00000587290 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.61□□□□□ -0.87
PRKCSH-204ENST00000587290 TEX46H3BTG2 121 aa9.61□□□□□ -0.87
PRKCSH-204ENST00000587290 PHOX2AO14813 284 aa9.61□□□□□ -0.87
PRKCSH-204ENST00000587290 COX6A2Q02221 97 aa9.61□□□□□ -0.87
PRKCSH-204ENST00000587290 IGKV2-24A0A0C4DH68 120 aa9.6□□□□□ -0.87
PRKCSH-204ENST00000587290 PRSS3P2Q8NHM4 247 aa9.6□□□□□ -0.87
PRKCSH-204ENST00000587290 GTSF1Q8WW33 167 aa9.6□□□□□ -0.87
PRKCSH-204ENST00000587290 RPP21Q9H633 154 aaKnown RBP9.6□□□□□ -0.87
PRKCSH-204ENST00000587290 ODF1Q14990 250 aa9.59□□□□□ -0.87
PRKCSH-204ENST00000587290 RNASEKQ6P5S7 137 aaKnown RBP9.59□□□□□ -0.87
PRKCSH-204ENST00000587290 OCC1Q8TAD7 63 aa9.59□□□□□ -0.87
PRKCSH-204ENST00000587290 CHCHD10Q8WYQ3 142 aaPredicted RBP9.59□□□□□ -0.87
PRKCSH-204ENST00000587290 CNFNQ9BYD5 112 aa9.59□□□□□ -0.87
PRKCSH-204ENST00000587290 AMMECR1LQ6DCA0 310 aa9.58□□□□□ -0.88
PRKCSH-204ENST00000587290 EIF5AL1Q6IS14 154 aaKnown RBP9.58□□□□□ -0.88
PRKCSH-204ENST00000587290 Q6ZRU5 148 aa9.58□□□□□ -0.88
PRKCSH-204ENST00000587290 BIN3Q9NQY0 253 aa9.58□□□□□ -0.88
PRKCSH-204ENST00000587290 PLAC8Q9NZF1 115 aa9.58□□□□□ -0.88
PRKCSH-204ENST00000587290 GAS8-AS1O95177 125 aa9.57□□□□□ -0.88
PRKCSH-204ENST00000587290 MAJINQ3KP22 176 aa9.57□□□□□ -0.88
PRKCSH-204ENST00000587290 LINC00526Q96FQ7 95 aa9.57□□□□□ -0.88
PRKCSH-204ENST00000587290 RNF185Q96GF1 192 aa9.57□□□□□ -0.88
PRKCSH-204ENST00000587290 APCSP02743 223 aa9.56□□□□□ -0.88
PRKCSH-204ENST00000587290 FGF6P10767 208 aa9.56□□□□□ -0.88
PRKCSH-204ENST00000587290 RPS10P46783 165 aaKnown RBP9.56□□□□□ -0.88
PRKCSH-204ENST00000587290 LYPD6BQ8NI32 183 aa9.56□□□□□ -0.88
PRKCSH-204ENST00000587290 A0A096LNI7 61 aa9.55□□□□□ -0.88
PRKCSH-204ENST00000587290 SDHAF1A6NFY7 115 aa9.55□□□□□ -0.88
PRKCSH-204ENST00000587290 FOXI1Q12951 378 aa9.55□□□□□ -0.88
PRKCSH-204ENST00000587290 GVQW2A0A096LPI5 108 aaPredicted RBP9.54□□□□□ -0.88
PRKCSH-204ENST00000587290 NDUFS6O75380 124 aaKnown RBP9.54□□□□□ -0.88
PRKCSH-204ENST00000587290 XCL1P47992 114 aa9.54□□□□□ -0.88
PRKCSH-204ENST00000587290 CFAP161Q6P656 301 aa9.54□□□□□ -0.88
PRKCSH-204ENST00000587290 STPG4Q8N801 248 aa9.54□□□□□ -0.88
PRKCSH-204ENST00000587290 FAM231BA6NCW3 169 aa9.53□□□□□ -0.88
PRKCSH-204ENST00000587290 SLC51BQ86UW2 128 aa9.53□□□□□ -0.88
PRKCSH-204ENST00000587290 C7orf33Q8WU49 177 aa9.53□□□□□ -0.88
PRKCSH-204ENST00000587290 GATCO43716 136 aaKnown RBP9.52□□□□□ -0.89
PRKCSH-204ENST00000587290 NCR2O95944 276 aa9.52□□□□□ -0.89
PRKCSH-204ENST00000587290 CEBPGP53567 150 aa9.52□□□□□ -0.89
PRKCSH-204ENST00000587290 PRR3P79522 188 aaKnown RBP9.52□□□□□ -0.89
PRKCSH-204ENST00000587290 SMIM15Q7Z3B0 74 aa9.52□□□□□ -0.89
PRKCSH-204ENST00000587290 TCTE3Q8IZS6 198 aa9.52□□□□□ -0.89
PRKCSH-204ENST00000587290 TMEM242Q9NWH2 141 aa9.52□□□□□ -0.89
PRKCSH-204ENST00000587290 LRP2P98164 4655 aa9.52□□□□□ -0.89
PRKCSH-204ENST00000587290 CCL25O15444 150 aa9.51□□□□□ -0.89
PRKCSH-204ENST00000587290 TSHBP01222 138 aa9.51□□□□□ -0.89
PRKCSH-204ENST00000587290 PMCHP20382 165 aa9.51□□□□□ -0.89
PRKCSH-204ENST00000587290 OR5A1Q8NGJ0 315 aa9.51□□□□□ -0.89
PRKCSH-204ENST00000587290 I3L3M4 83 aa9.5□□□□□ -0.89
PRKCSH-204ENST00000587290 ALKAL2Q6UX46 152 aa9.5□□□□□ -0.89
PRKCSH-204ENST00000587290 LINC00959A0A1B0GUT2 108 aa9.49□□□□□ -0.89
PRKCSH-204ENST00000587290 H7C423 109 aa9.49□□□□□ -0.89
PRKCSH-204ENST00000587290 TAGLN2P37802 199 aaKnown RBP9.49□□□□□ -0.89
PRKCSH-204ENST00000587290 TRBV6-5A0A0K0K1A5 114 aa9.48□□□□□ -0.89
PRKCSH-204ENST00000587290 ESDP10768 282 aa9.48□□□□□ -0.89
PRKCSH-204ENST00000587290 ZNF25P17030 456 aaPredicted RBP9.48□□□□□ -0.89
PRKCSH-204ENST00000587290 BTF3L4Q96K17 158 aa9.48□□□□□ -0.89
PRKCSH-204ENST00000587290 A8MWL6 223 aa9.47□□□□□ -0.89
PRKCSH-204ENST00000587290 SMKR1H3BMG3 65 aa9.47□□□□□ -0.89
PRKCSH-204ENST00000587290 TEX261Q6UWH6 196 aa9.47□□□□□ -0.89
PRKCSH-204ENST00000587290 FAM231DQ6ZW35 169 aa9.47□□□□□ -0.89
PRKCSH-204ENST00000587290 MRAP2Q96G30 205 aa9.47□□□□□ -0.89
PRKCSH-204ENST00000587290 TMEM101Q96IK0 257 aa9.47□□□□□ -0.89
PRKCSH-204ENST00000587290 CARD19Q96LW7 228 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms